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1.
J Med Chem ; 64(1): 404-416, 2021 01 14.
Article in English | MEDLINE | ID: mdl-33369409

ABSTRACT

In this study, a new class of bifunctional inhibitors of bacterial ureases, important molecular targets for antimicrobial therapies, was developed. The structures of the inhibitors consist of a combination of a phosphonate or (2-carboxyethyl)phosphinate functionality with a catechol-based fragment, which are designed for complexation of the catalytic nickel ions and covalent bonding with the thiol group of Cys322, respectively. Compounds with three types of frameworks, including ß-3,4-dihydroxyphenyl-, α-3,4-dihydroxybenzyl-, and α-3,4-dihydroxybenzylidene-substituted derivatives, exhibited complex and varying structure-dependent kinetics of inhibition. Among irreversible binders, methyl ß-(3,4-dihydroxyphenyl)-ß-(2-carboxyethyl)phosphorylpropionate was observed to be a remarkably reactive inhibitor of Sporosarcina pasteurii urease (kinact/KI = 10 420 s-1 M-1). The high potential of this group of compounds was also confirmed in Proteus mirabilis whole-cell-based inhibition assays. Some compounds followed slow-binding and reversible kinetics, e.g., methyl ß-(3,4-dihydroxyphenyl)-ß-phosphonopropionate, with Ki* = 0.13 µM, and an atypical low dissociation rate (residence time τ = 205 min).


Subject(s)
Bacteria/enzymology , Catechols/pharmacology , Organophosphonates/pharmacology , Urease/antagonists & inhibitors , Structure-Activity Relationship
2.
Eur J Med Chem ; 186: 111880, 2020 Jan 15.
Article in English | MEDLINE | ID: mdl-31753513

ABSTRACT

To date, drugs that hit a single target are inadequate for the treatment of neurodegenerative diseases, such as Alzheimer's or Parkinson's diseases. The development of multitarget ligands, able to interact with the different pathways involved in the progession of these disorders, represents a great challenge for medicinal chemists. In this context, we report here the synthesis and biological evaluation of phenol-lipoyl hybrids (SV1-13), obtained via a linking strategy, to take advantage of the synergistic effect due to the antioxidant portions and anti-amyloid properties of the single constituents present in the hybrid molecule. Biological results showed that SV5 and SV10 possessed the best protective activity against Aß1-42 induced neurotoxicity in differentiated SH-SY5Y cells. SV9 and SV10 showed remarkable antioxidant properties due to their ability to counteract the damage caused by H2O2 in SHSY-5Y-treated cells. Hovewer, SV5, showing moderate antioxidant and good neuroprotective activities, resulted the best candidate for further experiments since it also resulted stable both simulated and plasma fluids.


Subject(s)
Alzheimer Disease/drug therapy , Amyloid beta-Peptides/antagonists & inhibitors , Antioxidants/pharmacology , Neuroprotective Agents/pharmacology , Peptide Fragments/antagonists & inhibitors , Phenols/pharmacology , Thioctic Acid/pharmacology , Alzheimer Disease/metabolism , Amyloid beta-Peptides/metabolism , Antioxidants/chemical synthesis , Antioxidants/chemistry , Cell Proliferation/drug effects , Dose-Response Relationship, Drug , Humans , Molecular Structure , Neuroprotective Agents/chemical synthesis , Neuroprotective Agents/chemistry , Peptide Fragments/metabolism , Phenols/chemical synthesis , Phenols/chemistry , Protein Aggregates/drug effects , Structure-Activity Relationship , Thioctic Acid/chemical synthesis , Thioctic Acid/chemistry , Tumor Cells, Cultured
3.
Bioorg Med Chem Lett ; 29(9): 1085-1089, 2019 05 01.
Article in English | MEDLINE | ID: mdl-30850166

ABSTRACT

Targeted covalent inhibitors of urease were developed on the basis of the catechol structure. Forty amide and ester derivatives of 3,4-dihydroxyphenylacetic acid, caffeic acid, ferulic acid and gallic acid were obtained and screened against Sporosarcinia pasteurii urease. The most active compound, namely propargyl ester of 3,4-dihydroxyphenylacetic acid exhibited IC50 = 518 nM andkinact/Ki = 1379 M-1 s-1. Inhibitory activity of this compound was better and toxicity lower than those obtained for the starting compound - catechol. The molecular modelling studies revealed a mode of binding consistent with structure-activity relationships.


Subject(s)
Anti-Bacterial Agents/pharmacology , Catechols/pharmacology , Sporosarcina/enzymology , Urease/antagonists & inhibitors , Anti-Bacterial Agents/chemistry , Catechols/chemistry , Enzyme Inhibitors/chemistry , Gene Expression Regulation, Bacterial/drug effects , Models, Molecular , Molecular Docking Simulation , Protein Conformation , Structure-Activity Relationship
4.
Nat Prod Res ; 32(11): 1267-1273, 2018 Jun.
Article in English | MEDLINE | ID: mdl-28627260

ABSTRACT

Phenolic acids, a sub-class of polyphenols, are widely studied. By contrary, 3,4-dihydroxyphenylacetic acid is scarcely studied. For this purpose, a series of 3,4-dihydroxyphenylacetic acid ester and amide derivatives/conjugates were synthesised for the first time. A systematic study has been performed to quantitatively identify the functional groups present in these compounds using different techniques such as 1H NMR, 13C NMR and ESI MS. The synthesised compounds were evaluated for their in vitro antioxidant activity by a DPPH radical-scavenging assay. Their physico-chemical profile is also studied using Molinspiration tool. Among all tested compounds, amidoester 36 showed the best scavenging activity possessing an EC50 17 µΜ and improved physico-chemical properties compared to the parent compound.


Subject(s)
3,4-Dihydroxyphenylacetic Acid/chemistry , Antioxidants/chemistry , Antioxidants/pharmacology , Amides/chemistry , Antioxidants/chemical synthesis , Chemistry Techniques, Synthetic , Drug Evaluation, Preclinical/methods , Esters/chemistry , Free Radical Scavengers/chemistry , Free Radical Scavengers/pharmacology , Structure-Activity Relationship
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