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2.
Int J Mol Sci ; 23(18)2022 Sep 07.
Article in English | MEDLINE | ID: mdl-36142217

ABSTRACT

Magnetosomes of magnetotactic bacteria consist of magnetic nanocrystals with defined morphologies enclosed in vesicles originated from cytoplasmic membrane invaginations. Although many proteins are involved in creating magnetosomes, a single magnetosome protein, Mms6 from Magnetospirillum magneticum strain AMB-1, can direct the crystallization of magnetite nanoparticles in vitro. The in vivo role of Mms6 in magnetosome formation is debated, and the observation that Mms6 binds Fe3+ more tightly than Fe2+ raises the question of how, in a magnetosome environment dominated by Fe3+, Mms6 promotes the crystallization of magnetite, which contains both Fe3+ and Fe2+. Here we show that Mms6 is a ferric reductase that reduces Fe3+ to Fe2+ using NADH and FAD as electron donor and cofactor, respectively. Reductase activity is elevated when Mms6 is integrated into either liposomes or bicelles. Analysis of Mms6 mutants suggests that the C-terminal domain binds iron and the N-terminal domain contains the catalytic site. Although Mms6 forms multimers that involve C-terminal and N-terminal domain interactions, a fusion protein with ubiquitin remains a monomer and displays reductase activity, which suggests that the catalytic site is fully in the monomer. However, the quaternary structure of Mms6 appears to alter the iron binding characteristics of the C-terminal domain. These results are consistent with a hypothesis that Mms6, a membrane protein, promotes the formation of magnetite in vivo by a mechanism that involves reducing iron.


Subject(s)
Magnetosomes , Magnetospirillum , Bacterial Proteins/chemistry , FMN Reductase/metabolism , Ferrosoferric Oxide/metabolism , Flavin-Adenine Dinucleotide/metabolism , Iron/metabolism , Lipids/analysis , Liposomes/metabolism , Magnetosomes/metabolism , Magnetospirillum/metabolism , Membrane Proteins/metabolism , NAD/metabolism , Ubiquitins/metabolism
3.
RSC Adv ; 9(65): 37977, 2019 Nov 19.
Article in English | MEDLINE | ID: mdl-35543926

ABSTRACT

[This corrects the article DOI: 10.1039/C6RA07662A.].

4.
Nanotechnology ; 29(35): 355603, 2018 Aug 31.
Article in English | MEDLINE | ID: mdl-29877867

ABSTRACT

DNA origami can be used to create a variety of complex and geometrically unique nanostructures that can be further modified to produce building blocks for applications such as in optical metamaterials. We describe a method for creating metal-coated nanostructures using DNA origami templates and a photochemical metallization technique. Triangular DNA origami forms were fabricated and coated with a thin metal layer by photochemical silver reduction while in solution or supported on a surface. The DNA origami template serves as a localized photosensitizer to facilitate reduction of silver ions directly from solution onto the DNA surface. The metallizing process is shown to result in a conformal metal coating, which grows in height to a self-limiting value with increasing photoreduction steps. Although this coating process results in a slight decrease in the triangle dimensions, the overall template shape is retained. Notably, this coating method exhibits characteristics of self-limiting and defect-filling growth, which results in a metal nanostructure that maps the shape of the original DNA template with a continuous and uniform metal layer and stops growing once all available DNA sites are exhausted.


Subject(s)
DNA/chemistry , Nucleic Acid Conformation , Photochemical Processes , Silver/chemistry , DNA/ultrastructure , Microscopy, Atomic Force , Spectrophotometry, Ultraviolet
5.
Int J Mol Sci ; 14(7): 14594-606, 2013 Jul 12.
Article in English | MEDLINE | ID: mdl-23857056

ABSTRACT

A common feature of biomineralization proteins is their self-assembly to produce a surface consistent in size with the inorganic crystals that they produce. Mms6, a small protein of 60 amino acids from Magnetospirillum magneticum strain AMB-1 that promotes the in vitro growth of superparamagnetic magnetite nanocrystals, assembles in aqueous solution to form spherical micelles that could be visualized by TEM and AFM. The results reported here are consistent with the view that the N and C-terminal domains interact with each other within one polypeptide chain and across protein units in the assembly. From studies to determine the amino acid residues important for self-assembly, we identified the unique GL repeat in the N-terminal domain with additional contributions from amino acids in other positions, throughout the molecule. Analysis by CD spectroscopy identified a structural change in the iron-binding C-terminal domain in the presence of Fe3+. A change in the intrinsic fluorescence of tryptophan in the N-terminal domain showed that this structural change is transmitted through the protein. Thus, self-assembly of Mms6 involves an interlaced structure of intra- and inter-molecular interactions that results in a coordinated structural change in the protein assembly with iron binding.


Subject(s)
Bacterial Proteins/metabolism , Iron/metabolism , Magnetospirillum/metabolism , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Magnetite Nanoparticles/chemistry , Magnetosomes/chemistry , Magnetosomes/metabolism , Micelles , Microscopy, Atomic Force , Mutation
6.
Langmuir ; 28(9): 4274-82, 2012 Mar 06.
Article in English | MEDLINE | ID: mdl-22316331

ABSTRACT

Surface sensitive X-ray scattering and spectroscopic studies have been conducted to determine structural properties of Mms6, the protein in Magnetospirillum magneticum AMB-1 that is implicated as promoter of magnetite nanocrystals growth. Surface pressure versus molecular area isotherms indicate Mms6 forms stable monolayers at the aqueous/vapor interface that are strongly affected by ionic conditions of the subphase. Analysis of X-ray reflectivity from the monolayers shows that the protein conformation at the interface depends on surface pressure and on the presence of ions in the solutions, in particular of iron ions and its complexes. X-ray fluorescence at grazing angles of incidence from the same monolayers allows quantitative determination of surface bound ions to the protein showing that ferric iron binds to Mms6 at higher densities compared to other ions such as Fe(2+) or La(3+) under similar buffer conditions.


Subject(s)
Bacterial Proteins/metabolism , Ferrosoferric Oxide/chemistry , Iron/metabolism , Nanoparticles/chemistry , Nanotechnology , Protein Binding
7.
Biomacromolecules ; 13(1): 98-105, 2012 Jan 09.
Article in English | MEDLINE | ID: mdl-22112204

ABSTRACT

Highly ordered mineralized structures created by living organisms are often hierarchical in structure with fundamental structural elements at nanometer scales. Proteins have been found responsible for forming many of these structures, but the mechanisms by which these biomineralization proteins function are generally poorly understood. To better understand its role in biomineralization, the magnetotactic bacterial protein, Mms6, which promotes the formation in vitro of superparamagnetic magnetite nanoparticles of uniform size and shape, was studied for its structure and function. Mms6 is shown to have two phases of iron binding: one high affinity and stoichiometric and the other low affinity, high capacity, and cooperative with respect to iron. The protein is amphipathic with a hydrophobic N-terminal domain and hydrophilic C-terminal domain. It self-assembles to form a micelle, with most particles consisting of 20-40 monomers, with the hydrophilic C-termini exposed on the outside. Studies of proteins with mutated C-terminal domains show that the C-terminal domain contributes to the stability of this multisubunit particle and binds iron by a mechanism that is sensitive to the arrangement of carboxyl/hydroxyl groups in this domain.


Subject(s)
Bacterial Proteins/chemistry , Iron/chemistry , Magnetite Nanoparticles/chemistry , Bacterial Proteins/genetics , Magnetite Nanoparticles/ultrastructure , Mutation , Particle Size , Protein Stability , Protein Structure, Tertiary
8.
ACS Nano ; 1(3): 228-33, 2007 Oct.
Article in English | MEDLINE | ID: mdl-19206653

ABSTRACT

Magnetotactic bacteria produce exquisitely ordered chains of uniform magnetite (Fe(3)O(4)) nanocrystals, and the use of the bacterial mms6 protein allows for the shape-selective synthesis of Fe(3)O(4) nanocrystals. Cobalt ferrite (CoFe(2)O(4)) nanoparticles, on the other hand, are not known to occur in living organisms. Here we report on the use of the recombinant mms6 protein in a templated synthesis of CoFe(2)O(4) nanocrystals in vitro. We have covalently attached the full-length mms6 protein and a synthetic C-terminal domain of mms6 protein to self-assembling polymers in order to template hierarchical CoFe(2)O(4) nanostructures. This new synthesis pathway enables facile room-temperature shape-specific synthesis of complex magnetic crystalline nanomaterials with particle sizes in the range of 40-100 nm that are difficult to produce using conventional techniques.


Subject(s)
Cobalt/chemistry , Ferric Compounds/chemical synthesis , Magnetospirillum/metabolism , Metal Nanoparticles/chemistry , Bacterial Proteins/metabolism , Diffusion , Ferric Compounds/chemistry , Magnetics , Polymers/chemistry , Temperature , Water/chemistry , X-Ray Diffraction
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