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1.
Sci Rep ; 14(1): 13137, 2024 06 07.
Article in English | MEDLINE | ID: mdl-38849505

ABSTRACT

Acclimation to crop niches for thousands of years has made indigenous rice cultivars better suited for stress-prone environments. Still, their response to UV-B resiliency is unknown. 38 rice landraces were grown in cemented pots in a randomised block design with three replicates under open field conditions in Sambalpur University in the wet season of 2022. Half of the plants in each of the cultivars were administered UV-B radiation at the panicle emergence stage in an adjustable UV-B chamber permitting sunlight, and the effects of the stress on various morpho-physiological features, such as spikelet sterility, flag leaf photosynthetic and flavonoid pigment contents, and lipid peroxidation activities, were estimated for calibration of stress resistance. The experiment identified Swarnaprabha and Lalkain as the most sensitive and resilient to stress respectively, and the differential response between them was further revealed in the expression of genes related to UV-B sensitivity. Subject to the stress, Swarnaprabha exhibited symptoms of injuries, like leaf burns, and a higher loss of various photosynthetic parameters, such as pigment contents, SPAD and Fv/Fm, ETR and qP values, while NPQ increased only in Lalkain. Exposure to UV-B increased the total phenolic and flavonoid contents in Lalkain while depressing them in Swarnaprabha. Such an effect amounted to a higher release of fluorescent energy in the latter. The levels of expression of gene families controlling flavonoid activation and UV-B signal transduction, such as OsWRKY, OsUGT, OsRLCK, OsBZIP, OsGLP, and CPD photolyase were similar in both the cultivars in the control condition. However, exposure to UV-B stress overexpressed them in resilient cultivars only. The magnitude of expression of the genes and the impact of the stress on photosynthetic parameters, phenolic compounds and pubescent hair structure at the panicle emergence stage could be valid indicators among indigenous rice for UV-B tolerance.


Subject(s)
Genetic Variation , Oryza , Photosynthesis , Ultraviolet Rays , Ultraviolet Rays/adverse effects , Oryza/genetics , Oryza/radiation effects , Oryza/growth & development , Photosynthesis/radiation effects , Gene Expression Regulation, Plant/radiation effects , Plant Leaves/radiation effects , Plant Leaves/metabolism , Plant Leaves/genetics , Plant Leaves/growth & development , Flavonoids/metabolism , Stress, Physiological
2.
Planta ; 259(2): 37, 2024 Jan 13.
Article in English | MEDLINE | ID: mdl-38217720

ABSTRACT

MAIN CONCLUSION: The study provides nutritional profiling of unexploited little millets from Eastern Ghats, which has ample opportunities for future breeding programs for enhancing the food quality and holds great potential in food industry. Little millet is an important small millet native to the Indian subcontinent and their nutritional value has been underutilized compared to other cereals. It's nutritional and nutraceutical profiling is essential to integrate the plants in developmental interventions. The present study evaluated comprehensive nutritional, nutraceutical and physico-functional properties of 14 selected little millet genotypes originated from Eastern Ghats of India and compared them with an improved variety (OLM 208) of the locality. The proximate compositions (per 100 g) showed significant variations, with moisture content ranging from 4.13 to 8.48 g, ash from 1.90 to 5.15 g, fat from 2.35 to 5.74 g, protein from 10.46 to 13.83 g, carbohydrate from 70.92 to 77.89 g, fiber from 2.03 to 7.82 g and energy from 372.8 to 391.1 kcal. These little millet flours are rich in phenol 5.37-12.73 mg/g, flavonoid 1.06-8.25 µg/g, vitamin C 12.72-22.86 µg/g, antioxidants 7.22-23.17%, iron 20.38 to 61.60 mg/ kg and zinc 17.47 to 37.59 mg/ kg. The first two components of principal component analysis captures 73.0% of the total variation, which reflected huge variability among the investigated genotypes. Maximum heritability and genetic advance were recorded in flavonoid, fiber, iron, zinc, phenol and vitamin C across the populations. Taken together, some indigenous little millet genotypes such as Mami, Kalia and Bada, were exceptionally rich in fiber, protein, energy, flavonoid, vitamin C and antioxidants and are nutritionally superior compared to other varieties from the locality. These nutrition rich little millet genotypes have ample opportunities for future breeding programs to enhance the cereal quality and holds great potential in food industry for making high value functional foods.


Subject(s)
Panicum , Plant Breeding , Dietary Supplements , Antioxidants , Vitamins , Edible Grain/genetics , Iron , Phenols , Flavonoids , Ascorbic Acid , Zinc
3.
Biochimie ; 2023 Sep 26.
Article in English | MEDLINE | ID: mdl-37769935

ABSTRACT

A lectin was isolated from the hepatopancreas of freshwater prawn, Macrobrachium rosenbergii by affinity chromatography using mucin-sepharose matrix. The purity of the isolated lectin was confirmed in native gradient PAGE that showed a single protein band of ∼37.9 kDa. In SDS-PAGE also one band of ∼43.3 kDa molecular weight was observed that indicated the protein to be a monomer. The band from the SDS-PAGE gel was identified through mass spectrometry as chitinase 1. The purified chitinase (50 µg/ml) hemagglutinated rabbit RBCs and, mucin and glucose inhibited hemagglutination with minimum concentrations of 0.1 mg/ml and 100 mM, respectively. Bacterial agglutination with Gram -ve Vibrio harveyi, Aeromonas sobria and Escherichia coli was also observed by this protein. Thus, chitinase 1 showed lectin-like properties besides its chitin hydrolytic activity. In western blot with hepatopancreas sample, rabbit antiserum against chitinase 1 cross-reacted to two additional proteins namely, chitinase 1C and obstructor E (a chitin-binding protein, CBP), besides its specific reactivity. An indirect ELISA was developed with the antiserum to quantify chitinases/CBP in hepatopancreas and serum samples of M. rosenbergii. The assay was used in samples from juvenile prawns following V. harveyi challenge. At 72 h post-challenge, significantly higher levels of chitinases/CBP were quantified in the hepatopancreas of the challenged group (1.8 ± 0.2 mg/g tissue) compared to the control (1.2 ± 0.1 mg/g tissue). This study suggests that the chitinase 1 protein with lectin-like properties is possibly induced at the protein level and can be putatively involved in the innate immune response of M. rosenbergii.

4.
Probiotics Antimicrob Proteins ; 15(6): 1596-1607, 2023 Dec.
Article in English | MEDLINE | ID: mdl-36593373

ABSTRACT

The study focuses on the isolation, characterization, and expression analysis of a lectin from the hepatopancreas of Macrobrachium rosenbergii. The protein was isolated by affinity chromatography on a melibiose-agarose column. The molecular weight of the native protein was found to be ~120 kDa which consists of a single polypeptide of ~39.5 kDa. On mass spectrometric analysis, the protein was identified as lipopolysaccharide- and beta-1,3-glucan binding protein (LGBP). LGBP showed hemagglutination with rabbit RBC like a lectin and its carbohydrate-binding specificity was determined by the hemagglutination inhibition test. The protein also showed antibacterial activity against two Gram-negative bacteria Vibrio harveyi and Aeromonas sobria, and one Gram positive bacteria Bacillus cereus in the disc diffusion test. Rabbit antiserum was raised against the purified LGBP and used to develop a sandwich ELISA system for quantitation of the protein in hepatopancreas and serum samples of M. rosenbergii. The expression of the LGBP transcripts in muscle, hepatopancreas, and gill tissues from M. rosenbergii juveniles at 72 h post-challenge of V. harveyi was not modulated as noticed in qPCR analysis. However, significant increases in the concentrations of LGBP protein in hepatopancreas (5.23 ± 0.45 against 3.43 ± 0.43 mg/g tissue in control) and serum (1.08 ± 0.14 against 0.61 ± 0.08 µg/ml in control) were observed in the challenged group of prawns in ELISA suggesting its putative role against bacterial infections. The study for the first time characterized the native LGBP of M. rosenbergii showing a multifunctional role in immunity.


Subject(s)
Palaemonidae , Animals , Rabbits , Lipopolysaccharides/metabolism , Hepatopancreas , Lectins
5.
Mass Spectrom Rev ; 41(5): 766-803, 2022 09.
Article in English | MEDLINE | ID: mdl-33624883

ABSTRACT

There has been a rising concern regarding the harmful impact of biotoxins, source of origin, and the determination of the specific type of toxin. With numerous reports on their extensive spread, biotoxins pose a critical challenge to figure out their parent groups, metabolites, and concentration. In that aspect, liquid chromatography-mass spectrometry (LC-MS) based analysis paves the way for its accurate identification and quantification. The biotoxins are ideally categorized as phytotoxins, mycotoxins, shellfish-toxins, ciguatoxins, cyanotoxins, and bacterial toxins such as tetrodotoxins. Considering the diverse nature of biotoxins, both low-resolution mass spectrometry (LRMS) and high-resolution mass spectrometry (HRMS) methods have been implemented for their detection. The sample preparation strategy for complex matrix usually includes "QuEChERS" extraction or solid-phase extraction coupled with homogenization and centrifugation. For targeted analysis of biotoxins, the LRMS consisting of a tandem mass spectrometer operating in multiple reaction monitoring mode has been widely implemented. With the help of the reference standard, most of the toxins were accurately quantified. At the same time, the suspect screening and nontarget screening approach are facilitated by the HRMS platforms during the absence of reference standards. Significant progress has also been made in sampling device employment, utilizing novel sample preparation strategies, synthesizing toxin standards, employing hybrid MS platforms, and the associated data interpretation. This critical review attempts to elucidate the progress in LC-MS based analysis in the determination of biotoxins while pointing out major challenges and suggestions for future development.


Subject(s)
Marine Toxins , Tandem Mass Spectrometry , Chromatography, Liquid/methods , Marine Toxins/analysis , Reference Standards , Solid Phase Extraction , Tandem Mass Spectrometry/methods
6.
Curr Genomics ; 22(1): 41-58, 2021 Jan.
Article in English | MEDLINE | ID: mdl-34045923

ABSTRACT

Flooding is one of the most hazardous natural disasters and a major stress constraint to rice production throughout the world, which results in huge economic losses. The frequency and duration of flooding is predicted to increase in near future as a result of global climate change. Breeding of flooding tolerance in rice is a challenging task because of the complexity of the component traits, screening technique, environmental factors and genetic interactions. A great progress has been made during last two decades to find out the flooding tolerance mechanism in rice. An important breakthrough in submergence research was achieved by the identification of major quantitative trait locus (QTL) SUB1 in rice chromosomes that acts as the primary contributor for tolerance. This enabled the use of marker-assisted backcrossing (MABC) to transfer SUB1 QTL into popular varieties which showed yield advantages in flood prone areas. However, SUB1 varieties are not always tolerant to stagnant flooding and flooding during germination stage. So, gene pyramiding approach can be used by combining several important traits to develop new breeding rice lines that confer tolerances to different types of flooding. This review highlights the important germplasm/genetic resources of rice to different types of flooding stress. A brief discussion on the genes and genetic mechanism in rice exhibited to different types of flooding tolerance was discussed for the development of flood tolerant rice variety. Further research on developing multiple stresses tolerant rice can be achieved by combining SUB1 with other tolerance traits/genes for wider adaptation in the rain-fed rice ecosystems.

7.
Int J Phytoremediation ; 23(1): 72-79, 2021.
Article in English | MEDLINE | ID: mdl-32657139

ABSTRACT

Sustainable application of fly ash and its management in agriculture is a major challenge nowadays. A pot culture experiment was conducted to find out the most suitable level of fly ash application for soil amendments that can improve the plant growth and productivity of Brahmi (Bacopa monnieri L.). After growing seedlings of B. monnieri under different levels of fly ash for 90 days, a significant increase in plant biomass, essential oil content and tolerance index (more than 100%) was observed under 25% of fly ash amended soil in comparison to garden soil and higher fly ash treatments. Leaf chlorophyll content and photosynthetic parameters were remained unchanged under 25% of fly ash as compared to seedlings grown on garden soil. However, these parameters were significantly declined under higher concentrations of fly ash treatments. Higher levels of fly ash caused oxidative damage and the induction of some antioxidative enzymes activities in B. monnieri indicates its capability to endure oxidative stress tolerance. Overall, our study showed that 25% of fly ash can be used as soil amendment for cultivation of B. monnieri L. leading to enhance plant biomass and essential oil production.


Subject(s)
Bacopa , Soil Pollutants , Biodegradation, Environmental , Coal Ash , Soil , Soil Pollutants/analysis
8.
Environ Sci Pollut Res Int ; 28(9): 11040-11052, 2021 Mar.
Article in English | MEDLINE | ID: mdl-33111225

ABSTRACT

Assessment of life history strategies of economically important small indigenous fishes (SIF) which are rich in nutritive values is essential and imperative to artisanal and subsistence small-scale inland fisheries of Indian tropical reservoirs. The present investigation aims to estimate the food selectivity in juveniles and adults, reproductive traits such as sexual maturity, gonadosomatic index, ova diameter, and fecundity of Gudusia chapra from a large impounded ecosystem of India. A total of 668 (Juvenile 129, adult 539) specimens, 37 to 142 mm standard length and 0.89-25.68 g body weight were collected during October 2014-September 2015. The qualitative estimation of the stomach contents revealed herbi-omnivorous feeding behavior of fish. The mean relative gut length (mRGL) of the species was 1.557 ± 0.024 in juveniles and 1.154 ± 0.012 in adults. The sex ratio was 1:1.30 with dominance of females in the population though insignificant. The total length at which 50% individual attain maturity (TL50) was estimated as 80.50 mm based on the logistic curve. The absolute fecundity of the individuals ranged from 749 to15044, and ova diameter ranged from 0.10-2.00 mm. The gonadal indices (GSI, MGSI, and DI) indicated that spawning extended throughout the year with peak reproductive activity in October, March-April, and July (mean absolute fecundity ranged from 4000 to 6000). The present study characterized biological and reproductive traits of G. chapra from a large reservoir ecosystem and demonstrated a new trend of reproductive pattern which will serve as benchmark data for future assessment and management planning of this species in impounded waters. The study also suggested some specific management measures for sustainable exploitation and conservation of small indigenous species.


Subject(s)
Ecosystem , Rivers , Animals , Biology , Female , Fishes , Humans , India , Reproduction , Seasons
9.
Physiol Mol Biol Plants ; 26(10): 1961-1971, 2020 Oct.
Article in English | MEDLINE | ID: mdl-33088042

ABSTRACT

Panicle architecture is an important character that influence reproductive success and contributes directly to grain yield. In the present study, we evaluated diversity of panicle traits in 77 indigenous rice landraces from Koraput and compared with three popularity cultivated hybrid varieties of the locality for possibility of using in crop improvement program. Significant morphological variations of panicle traits such as panicle number, panicle angle, panicle weight, panicle length, grain number and grain weight were recorded in studied rice landraces. Based on the principal component analysis, first two axis of principal component captures 56.34% of the total variation and indicated significant variability of panicle traits among the genotypes. Panicle length, panicle weight, grain number and flag leaf area are the major determinants of phenotypic diversity. Multiple correlation between traits indicated that panicle weight in studied rice landraces were positively correlated with panicle number, grain number and leaf area and negatively associated with panicle length, panicle angle and chaff number. The genetic advance as percentage of mean (GAM) ranged from 22.19% for panicle length to 147.02% for panicle angle. High GAM along with heritability was observed for panicle number, panicle weight, grain number and chaff number and are important traits for selection during crop improvement. Some of the landraces such as Matidhan, Bhatagurumukhi, Chiklakoli and Kamuntana remarkably showed superior panicle weight along with higher grain number and length of panicle, which can be used in the future rice breeding program.

10.
Heliyon ; 6(8): e04567, 2020 Aug.
Article in English | MEDLINE | ID: mdl-32885064

ABSTRACT

Castor (Ricinus communis L.) is a metal tolerant plants and its ability to survive in highly polluted sites as well as its capacity for metal accumulation. There are very few reports on their physiological mechanism of metal tolerance and detoxification under fly ash. Therefore, an in-situ experiment was designed to study its biomass accumulation, photosynthetic response and antioxidative metabolism under different levels of fly ash amendments. Significant (P < 0.05) increase in plant biomass and metal tolerance index was observed in R. communis under 50 % fly ash in soil amendments in comparison to the control plants. In addition, photosynthetic activity was not significantly altered under fly ash amended soil in comparison to the garden soil, but these responses/activities were remarkable lowered under bare fly ash. The induction of antioxidant enzymes was also observed in different tissue over control under fly ash treatments. The bioconcentration factor (BCF) of Al, Fe, Zn, Mn, Cu and Cr in R. communis were recorded greater than one under fly ash (50%) with soil amendments. Therefore, it concluded that it can be used for phytoremediation of fly ash and fly ash (50%) with soil amendments enhanced phytoremediation ability.

11.
J Food Sci Technol ; 57(6): 2370-2376, 2020 Jun.
Article in English | MEDLINE | ID: mdl-32431363

ABSTRACT

Modern research is directed towards finding naturally-occurring antioxidants of plant origin for improving nutrition and health benefit. Wild yam species are used as indigenous food and medicine by various tribal groups of Koraput, India. However, detailed analysis of health promoting bioactive compounds and antioxidant properties are lacking. The present study aims to evaluate the flavonoid, total antioxidant capacity and in vitro antioxidant activity of different wild and cultivated Dioscorea species of Koraput. The extract of these tuber was screened for its potential antioxidant activities by various tests, such as DPPH, nitric oxide, superoxide and ABTS radical cation assay. The phenol, flavonoid and total antioxidant capacity of the samples were ranged from 2.19 to 9.62 mg g-1 dry weight, 0.62-0.85 mg g-1 dry weight and 1.63-5.59%, respectively. The IC50 values were 77.9-1164, 101.2-1031.6, 27.0-1022.6 and 47.1-690 µg ml-1 for DPPH, ABTS, superoxide and nitric oxide scavenging activity, respectively. Taken together, some wild yam species such as D. bulbifera, D. pubera and D. pentaphylla had significantly higher flavonoids content and antioxidant capacity along with the lower IC50 values than the standards in compared to the other species. The present studies confirmed that some wild yam tubers have superior potential for scavenging deleterious free radicals effectively. Results indicated that these wild yam species should be promoted as natural source of antioxidants.

12.
Int J Phytoremediation ; 22(11): 1195-1203, 2020.
Article in English | MEDLINE | ID: mdl-32356449

ABSTRACT

Sida acuta Burm. f. and Cassia tora (L.) Roxb were identified as dominant plant species in fly ash deposit of NALCO, Koraput, India in our earlier study. However, little information is available on their physiological response to metal stress under fly ash amended soil. A pot experiment was designed with fly ash amended soil to assess its growth, photosynthesis, antioxidant defense along with metal accumulation. Addition of fly ash (50%) in soil amendments not only improved the soil physico-chemical characteristics but also increased the plant biomass. The studied plants were found to be a potential metal tolerant as metal tolerance index was more than 100% under fly ash amended soil. Leaf photosynthetic rate, chlorophyll content and photosystem II activity were not significantly changed under low level of fly ash amended soil (50%) compared to the garden soil. The induction of some antioxidative enzymes such as superoxide dismutase, ascorbate peroxidase, Guaiacol peroxidase and catalase in studied plants under elevated fly ash indicates metal tolerance ability of this plant to oxidative stress. Based on the bioaccumulation factor (BCF) and transfer factor (TF), these plants can be used for the remediation of Mn, Cu, Zn, Fe and Cr from fly ash.


Subject(s)
Soil Pollutants/analysis , Soil , Biodegradation, Environmental , Coal Ash , India
13.
Front Pharmacol ; 11: 496, 2020.
Article in English | MEDLINE | ID: mdl-32390842

ABSTRACT

Food and nutritional security are the major concerns in many countries of the world and may have potential to contribute to sustainable food systems under climate change. To address the food and nutritional insecurity, it has become extremely important to diversify the present-day agricultural system as well as to search for alternative food and feed ingredients. Some wild root and tuber crops occupy a remarkable position toward food security of the developing world due to their high calorific value and superior carbohydrate content. Yam (Dioscorea spp.) provides food and medicines to millions of people in the world especially in the tropics and sub tropics. It is recognized as the fourth most important tuber crop after potatoes, cassava, and sweet potatoes. It contributes about 10% of the total root and tubers production around the world. Yams also considered as famine food and plays a prime role in the food habit of small and marginal rural families and forest-dwelling communities during the food scarcity periods. These species are unique for their food, medicinal and economic values but their wider utilization is limited due to the presence of anti-nutritional compositions. This paper describes the ethnobotany of yam species in relation to their nutritional, anti-nutritional and pharmacological properties and highlights the potentiality for food and nutritional security for combating the "hidden hunger" caused by micronutrient deficiencies.

14.
Funct Plant Biol ; 47(2): 99-111, 2020 02.
Article in English | MEDLINE | ID: mdl-31856943

ABSTRACT

The aim of the present research was to compare the effects of different abiotic stresses (drought, salinity and submergence) on growth, photosynthesis and PSII activity along with antioxidant defence of three premium rice landraces, namely Kalajeera, Machhakanta and Haladichudi from Jeypore tract of Odisha, India to evaluate their performance under multiple stresses and possibility of using in the pre-breeding programs. Results showed that drought, salinity and submergence significantly reduced plant growth, leaf photosynthesis, water use efficiency (WUE), carboxylation efficiency (CE), PSII activity and SPAD chlorophyll index, and the highest effect was observed in susceptible check variety (IR64). In addition, the indigenous rice lines showed better stomatal traits such as stomatal density (SD), stomatal size (SS) and stomatal number per leaf area (S/LA). Notably, higher activities of antioxidative enzymes and proline accumulation was observed in studied indigenous rice landraces and were found comparable with the drought and salinity tolerant (N22) and submergence tolerant (FR13A) check varieties. Based on our findings it was revealed that these landraces can be expected to possess an adequate level of tolerance to drought, salinity and submergence and showed adaptive fitness to multiple stresses during seedling stage. These landraces can be considered as potential donor for future rice pre-breeding program.


Subject(s)
Oryza , Antioxidants , Droughts , India , Photosynthesis
15.
Physiol Mol Biol Plants ; 25(5): 1225-1233, 2019 Sep.
Article in English | MEDLINE | ID: mdl-31564784

ABSTRACT

Wild yams (Dioscorea spp.) are important tuber crops used both as vegetable and medicine by the tribal people of Koraput, India. There is deficiency of documented information on genetic structure and diversity of wild yams and its genetic assessment is necessary for crop improvement program. The present study assessed the level of genetic diversity of eight wild and one cultivated yam species of Koraput by using different morphological and molecular markers. Significant variation in different yield and morphological traits was observed among the studied yam species. The major morphological traits such as branch number, stem thickness, tuber depth, tuber length, number of tubers per plant and yield showed high genetic heritability accompanied with high genetic advance and major determinants of phenotypic diversity. Molecular profiling was carried out by taking five simple sequence repeat markers. A total of 10 polymorphic bands with an average of two were detected at the loci of the five markers across the nine yam species. Genetic similarity analysis revealed that some wild yam species such as D. oppositifolia, D. hamiltonii and D. pubera showed higher genetic similarity with cultivated (D. alata) species. The knowledge of the extent of genetic variations of wild yam species is important for planning of the genetic conservation and the utilization of this resource especially for genetic improvement.

16.
Data Brief ; 25: 104305, 2019 Aug.
Article in English | MEDLINE | ID: mdl-31516923

ABSTRACT

Variations in photosynthetic characteristics and dry matter accumulation were investigated in thirty selected rice (Oryza sativa L.) landraces from Jeypore tract of Odisha, India to find the possibility of their use in crop improvement programs. Leaf gas exchange measurements, photosystem (PS) II activity and leaf pigment estimates were conducted at the flowering stage. Significant differences were noticed in the CO2 photosynthetic rate (PN), stomatal conductance (gs), transpiration rate (E), internal CO2 concentration (Ci), water use efficiency (WUE) and carboxylation efficiency (CE) among the landraces. In addition, significant variation was observed in leaf chlorophyll content, PS II activity and dry matter accumulation (DMA). Further, multiple correlations between photosynthetic characteristics and other physiological traits revealed that leaf photosynthesis was not significantly influenced by PS II photochemical activity, leaf area and pigment contents but it was regulated by stomatal conductance, water use efficiency and carboxylation efficiency. Taken together, data presented here shows that some of the landraces had superior photosynthetic traits along with better DMA under prevailing environmental condition and can be used for future crop improvement programs aimed for an increase of leaf photosynthesis in rice.

17.
Data Brief ; 25: 104363, 2019 Aug.
Article in English | MEDLINE | ID: mdl-31485470

ABSTRACT

Precise physiological and molecular marker-based assessment provides information about the extent of genetic diversity, which helps for effective breeding programmes. We have conducted detailed physiological and molecular marker-based assessment of selected eight indigenous rice landraces from Koraput, India along with tolerant (N22) and susceptible (IR64) check varieties under control and simulated drought stress using polyethylene glycol (PEG) 6000. After exposure to different levels of drought stress, relative germination performance (RGP), seedling vigour index (SVI) and relative growth index (RGI) were significantly declined in all the rice landraces compared to the control plants and significant varietal differences were observed. Genetic relationship among the studied rice landraces was assessed with 24 previously reported drought tolerance linked Simple Sequence Repeat (SSR) markers. A total of 53 alleles were detected at the loci of the 24 markers across the 10 rice accessions. The Nei's gene diversity (He) and the polymorphism information content (PIC) ranged from 0 to 0.665 and 0 to 0.687, respectively. Six SSR loci, RM276, RM411, RM3, RM263, RM216 and RM28199, provided the highest PIC values and are potential for exploring the genetic diversity of studied rice lines for drought tolerance. Four rice genotypes (Butkichudi, Haldichudi, Machakanta and Kalajeera) showed the highest genetic distance with tolerant check variety (N22) and can be considered as valuable genetic resources for drought breeding program.

18.
Physiol Mol Biol Plants ; 25(4): 847-863, 2019 Jul.
Article in English | MEDLINE | ID: mdl-31404200

ABSTRACT

Submergence tolerance in rice is important for improving yield under rain-fed lowland rice ecosystem. In this study, five traditional rice landraces having submergence tolerance phenotype were selected. These five rice landraces were chosen based on the submergence-tolerance screening of 88 rice landraces from various lowland areas of Jeypore tract of Odisha in our previous study. These five rice landraces were further used for detailed physiological assessment under control, submergence and subsequent re-aeration to judge their performance under different duration of submergence. Seedling survival was significantly decreased with the increase of plant height and significant varietal difference was observed after 14 days of complete submergence. Results showed that submergence progressively declined the leaf photosynthetic rate, stomatal conductance, instantaneous water use efficiency, carboxylation efficiency, photosystem II (PSII) activity and chlorophyll, with greater effect observed in susceptible check variety (IR 42). Notably, higher activities of antioxidative enzymes and ascorbate level were observed in traditional rice landraces and were found comparable with the tolerant check variety (FR 13A). Taken together, three landraces such as Samudrabali, Basnamundi and Gadaba showed better photosynthetic activity than that of tolerant check variety (FR 13A) and showed superior antioxidant response to submergence and subsequent re-aeration. These landraces can be considered as potential donors for the future submergence tolerance breeding program.

19.
Environ Sci Pollut Res Int ; 26(18): 18804-18813, 2019 Jun.
Article in English | MEDLINE | ID: mdl-31062241

ABSTRACT

Fish assemblage structure in Panchet, a large tropical reservoir along river Damodar, major tributary of river Ganga in India, was studied along the spatial gradient of the impoundment. Fish samples were collected bimonthly from October 2014 to September 2016. Fish community structure in terms of species composition, relative abundance, and trophic and conservation status was recorded. Spatial fish diversity was analyzed from riverine, transitional, and lacustrine zones. Sixty-two fish species were recorded wherein the family Cyprinidae dominated in number of species (26) followed by Bagridae (5). Shannon diversity index, evenness index, and species richness did not reveal significant variation (p > 0.05) across different zones. Relative abundance of individuals and species richness were maximum in the transitional zone and minimum in the lacustrine zone. Multi-dimensional scaling of fish assemblage revealed similar pattern in the riverine and transitional zones. Trophic guild of fishes indicated dominance of carnivorous species followed by planktivores. Conservation status (IUCN 2017.3) showed 4 fish species in Near Threatened category. The study suggests conservation of fish habitats to maintain diversity and sustained production. The baseline information generated in the study will be beneficial for monitoring the alteration in fish assemblage, conservation of fish diversity, and management planning.


Subject(s)
Fishes/classification , Lakes , Rivers , Animals , Biodiversity , Ecosystem , Fisheries , Fishes/growth & development , Food Chain , India , Population Density , Population Dynamics , Seasons
20.
Environ Sci Pollut Res Int ; 26(9): 9089-9098, 2019 Mar.
Article in English | MEDLINE | ID: mdl-30715700

ABSTRACT

Reservoirs have been given priority as an important resource for fisheries enhancement in inland open waters. This paper described the spatial and temporal pattern of fish diversity using GIS platform, assemblage structure, and studied the influence of environmental parameters in these variables in a large tropical reservoir, Chandil, located in the eastern India using multiple approaches. Altogether, 42 fish species belonging to 30 genera were recorded from the reservoir, including two exotic species: pangas, Pangasianodon hypophthalmus, and Nile tilapia, Oreochromis niloticus. The diversity indices indicated lowest fish diversity in the lacustrine zone, but without distinct seasonal variation. The taxonomic distinctness was lower in the lacustrine zone as compared to other zones, and the summer season exhibited higher taxonomic distinctness, though the number of species was lowest. Most of the physicochemical parameters recorded are within the favorable range for fisheries enhancement. Among the environmental parameters, pH and nitrate significantly influenced the fish abundance. The study recommends suitable measures and interventions for conservation of the native fish diversity and sustainable fisheries development: closed season, protected/conservation area, introduction of fish aggregating device (FAD), and regulated fish culture in enclosures.


Subject(s)
Biodiversity , Fishes/classification , Animals , Ecosystem , Eliminative Behavior, Animal , Fisheries , Fishes/growth & development , Fishes/physiology , India , Seasons
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