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1.
Toxicol Rep ; 8: 1404-1411, 2021.
Article in English | MEDLINE | ID: mdl-34295651

ABSTRACT

In recent years, seaweeds drew the intense attention of the researchers owing their biological properties with their multi assorted applications to the humans. Red seaweeds are well-known for their biological activities due to enrichment of phenolic residues. The present investigation deals with the portrayal of biological behavior of red algae Gracilaria edulis and Hypnea valentiae. Polyphenol was extracted using methanol in a soxhlet extractor for 6 h. The crude polyphenol compound was partially purified in DEAE cellulose52 column. The total phenolic content present in the polyphenol compound was G. edulis (75.49 ± 0.12 %) and H. valentiae (70.08 ± 0.34 %). The phytochemicals present in the two seaweeds were flavonoids, saponins, tannins, phenolics, alkaloids and steroids. The antimicrobial activity of polyphenol compounds was assessed against seven human pathogens, five plant pathogens and three fungal pathogens. The free radical scavenging activity of polyphenol compound was assayed such as total antioxidant capacity, reducing power, hydrogen peroxide scavenging activity, DPPH, ABTS, hydroxyl-scavenging assay, superoxide anion radical scavenging and nitric oxide. Polyphenol compound was analyzed by FT-IR and GC-MS.

2.
Asian Pac J Trop Biomed ; 4(Suppl 1): S16-21, 2014 May.
Article in English | MEDLINE | ID: mdl-25183073

ABSTRACT

Metagenomics research has been developed over the past decade to elucidate the genomes of the uncultured microorganisms with an aim of understanding microbial ecology. On the other hand, it has also been provoked by the increasing biotechnological demands for novel enzymes, antibiotic and signal mimics. The gut microbiota of insects plays crucial roles in the growth, development and environmental adaptation to the host insects. Very recently, the insect microbiota and their genomes (microbiome), isolated from insects were recognized as a major genetic resources for bio-processing industry. Consequently, the exploitation of insect gut microbiome using metagenomic approaches will enable us to find novel biocatalysts and to develop innovative strategies for identifying smart molecules for biotechnological applications. In this review, we discuss the critical footstep in extraction and purification of metagenomic DNA from insect gut, construction of metagenomic libraries and screening procedure for novel gene identification. Recent innovations and potential applications in bioprocess industries are highlighted.

3.
Article in Chinese | WPRIM (Western Pacific) | ID: wpr-672429

ABSTRACT

Metagenomics research has been developed over the past decade to elucidate the genomes of the uncultured microorganisms with an aim of understanding microbial ecology. On the other hand, it has also been provoked by the increasing biotechnological demands for novel enzymes, antibiotic and signal mimics. The gut microbiota of insects plays crucial roles in the growth, development and environmental adaptation to the host insects. Very recently, the insect microbiota and their genomes (microbiome), isolated from insects were recognized as a major genetic resources for bio-processing industry. Consequently, the exploitation of insect gut microbiome using metagenomic approaches will enable us to find novel biocatalysts and to develop innovative strategies for identifying smart molecules for biotechnological applications. In this review, we discuss the critical footstep in extraction and purification of metagenomic DNA from insect gut, construction of metagenomic libraries and screening procedure for novel gene identification. Recent innovations and potential applications in bioprocess industries are highlighted.

4.
Bioinformation ; 9(2): 101-5, 2013.
Article in English | MEDLINE | ID: mdl-23390354

ABSTRACT

UNLABELLED: Common effluent treatment plant (CETP) for tannery effluent, is the combination of physical, chemical and biological treatment to facilitate the degradation of industrial waste water. Obviously, the biomass which survives in this extreme environment may have the ability to utilize the effluent as the sole carbon source for its survival. The ultimate aim of the present investigation is to expose the microbial diversity in each stage of the CETP through the culture dependent way. Bacterial diversity in the effluent were analysed through 16S rRNA gene. The community study revealed the dominance of firmicutes and the dominant genus was Bacillus sp, with variable species diversity. Notably, Putative Bacillus sp, B. firmus and B. licheniformis were observed in all stages of treatment. The dominant residents were analysed by BProm and TF site scan to prove their uniqueness. This species richness indicates the capability of liveliness in treatment plant and whose can be exploited for treating the effluent by using modern molecular approach. ABBREVIATIONS: CETP - Common Effluent Treatment Plant, PTIET - Pallavaram Tanners Industrial Effluent Treatment Company Ltd.

5.
Rapid Commun Mass Spectrom ; 25(21): 3203-6, 2011 Nov 15.
Article in English | MEDLINE | ID: mdl-22006381

ABSTRACT

Silk from the domesticated silk worm Bombyx mori procures foreign body response naturally, so it has been utilized as a biomaterial for decades. In India the prime focus of the sericulture industry is to improve silk production with high quality silk. Naturally, the silk worm builds its cocoon not only with silk proteins, but also with antimicrobial proteins to avoid infection since the cocoon is non-motile and non-feeding. The aim of the present study is to elucidate the antimicrobial proteins that persist in the cocoon of the silk worm Bombyx mori. At the pupal stage, the silk worm cocoon shell extract was prepared from the day of pupation (P0) to the day of natural rupture of the cocoon for the eclosion of moth (NR). Using the cocoon shell extract a microbial susceptibility test was performed by the disc diffusion method against the microbes Escherchia coli, Bacillus cereus, Staphylococcus aureus, Pseudomonas aeruginosa, and Klebsiella pneumoniae. The development of a zone of inhibition against the microbes confirmed the presence of antimicrobial/immunogenic activity of the cocoon shell extract. For further analysis, the cocoon shell extract was subjected to 7-15% sodium dodecyl sulfate/polyacrylamide gel electrophoresis (SDS-PAGE). The protein profile of the cocoon extract revealed the coomassie blue stained bands resolved from the 150-15 kDa molecular range. Interestingly, a polypeptide localized at around 29 kDa showed remarkable expressional changes during the development of pupa. To characterize the 29 kDa protein, it was eluted from the gel, digested with trypsin and analyzed by matrix-assisted laser desorption/ionization mass spectrometry (MALDI-MS). The trypsin-digested peptide peaks were analyzed through MASCOT and peptides were matched with the NCBI nr database. The peptides were very well matched with the 18 wheeler protein, which is reported to be responsible for innate immunity, belonging to the Toll family in insects and responsible for cellular mediated immunity.


Subject(s)
Bombyx/physiology , Silk/physiology , Animals , Anti-Bacterial Agents/analysis , Anti-Bacterial Agents/pharmacology , Bacteria/drug effects , Electrophoresis, Polyacrylamide Gel , Insect Proteins/analysis , Insect Proteins/pharmacology , Microbial Sensitivity Tests , Peptide Fragments/analysis , Peptide Fragments/metabolism , Proteome , Pupa/physiology , Silk/chemistry , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Trypsin/metabolism
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