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1.
Appl Microbiol Biotechnol ; 104(17): 7521-7532, 2020 Sep.
Article in English | MEDLINE | ID: mdl-32676709

ABSTRACT

The growing demand for food and biofuels urges the vegetable oil processing industry to adopt cleaner technologies to mitigate the environmental pollution caused by chemical refining processes. Over the past decade, several enzymatic methods have proven to be efficient at reducing the generated waste, but improving the benefit-cost ratio is still necessary for the widespread adoption of this technology. In this work, we show that lecithin:cholesterol acyltransferase from Aeromonas enteropelogenes (LCATAE) provides a higher extra-yield of soybean oil than a type A1 phospholipase (PLA) enzyme currently commercialized for soybean oil deep degumming. Our model indicates that crude soybean oil treated with the new enzyme generates 87% more neutral oil from phospholipids than the widely used PLA, with the corresponding reduction in waste and byproducts generation. The refined oil retains the phytosterols naturally present in crude oil, enriching its nutritional value. The results presented here position LCATAE as a promising candidate to provide the green solutions needed by the industrial oil processing sector. Key points • Selected LCAT gene candidates were expressed in E. coli. • Aeromonas enteropelogenes LCAT hydrolyzes all the phospholipids present in crude soybean oil. • The LCAT enzyme provides a higher yield of neutral oil than commercial PLA enzymes and generates less waste. • The degummed oil retains sterols with high nutritional value.


Subject(s)
Lecithins , Soybean Oil , Aeromonas , Escherichia coli , Nutritive Value , Sterol O-Acyltransferase
2.
Appl Microbiol Biotechnol ; 103(6): 2571-2582, 2019 Mar.
Article in English | MEDLINE | ID: mdl-30729255

ABSTRACT

Phospholipids play a central role in all living organisms. Phospholipases, the enzymes aimed at modifying phospholipids, are consequently widespread in nature and play diverse roles, from lipid metabolism and cellular signaling in eukaryotes to virulence and nutrient acquisition in microbes. Phospholipases catalyze the hydrolysis of one or more ester or phosphodiester bonds of glycerophospholipids. The use of phospholipases with industrial purposes has constantly increased over the last 30 years. This demand is rapidly growing given the ongoing improvements in protein engineering and the reduction of enzymes manufacturing costs, making them suitable for industrial use. Here, a general overview of phopholipases A, B, C, and D and their industrial application is presented along with potential new uses for these enzymes. We draw attention to commercial phospholipases used to improve the emulsifying properties of products in the baking, egg, and dairy industries. On the other hand, the improvement of oil degumming by phospholipases is thoroughly analyzed. Moreover, recent developments in enzymatic biodiesel production and the use of phospholipases for the synthesis of phospholipids with pharmaceutical or nutritional value are reviewed.


Subject(s)
Phospholipases/chemistry , Phospholipids/metabolism , Biofuels , Biotechnology/economics , Biotechnology/methods , Catalysis , Food Industry , Hydrolysis , Phospholipases/classification , Protein Engineering/economics , Protein Engineering/methods , Substrate Specificity
3.
Appl Microbiol Biotechnol ; 102(16): 6997-7005, 2018 Aug.
Article in English | MEDLINE | ID: mdl-29909572

ABSTRACT

ßγ-crystallin has emerged as a superfamily of structurally homologous proteins with representatives across all domains of life. A major portion of this superfamily is constituted by microbial members. This superfamily has also been recognized as a novel group of Ca2+-binding proteins with a large diversity and variable properties in Ca2+ binding and stability. We have recently described a new phosphatidylinositol phospholipase C from Lysinibacillus sphaericus (LS-PIPLC) which was shown to efficiently remove phosphatidylinositol from crude vegetable oil. Here, the role of the C-terminal ßγ-crystallin domain of LS-PIPLC was analyzed in the context of the whole protein. A truncated protein in which the C-terminal ßγ-crystallin domain was deleted (LS-PIPLCΔCRY) is catalytically as efficient as the full-length protein (LS-PIPLC). However, the thermal and chemical stability of LS-PIPLCΔCRY are highly affected, demonstrating a stabilizing role for this domain. It is also shown that the presence of Ca2+ increases the thermal and chemical stability of the protein both in aqueous media and in oil, making LS-PIPLC an excellent candidate for use in industrial soybean oil degumming.


Subject(s)
Bacillaceae/enzymology , Phosphoinositide Phospholipase C/chemistry , Phosphoinositide Phospholipase C/genetics , beta-Crystallins/chemistry , gamma-Crystallins/chemistry , Binding Sites , Calcium/metabolism , Escherichia coli/genetics , Mutation , Phosphoinositide Phospholipase C/biosynthesis , Protein Stability , Protein Structure, Tertiary
4.
World J Microbiol Biotechnol ; 34(3): 40, 2018 Feb 21.
Article in English | MEDLINE | ID: mdl-29468428

ABSTRACT

Extremophilic microorganisms are a rich source of enzymes, the enzymes which can serve as industrial catalysts that can withstand harsh processing conditions. An example is thermostable ß-glucosidases that are addressing a challenging problem in the biodiesel industry: removing steryl glucosides (SGs) from biodiesel. Steryl glucosidases (SGases) must be tolerant to heat and solvents in order to function efficiently in biodiesel. The amphipathic nature of SGs also requires enzymes with an affinity for water/solvent interfaces in order to achieve efficient hydrolysis. Additionally, the development of an enzymatic process involving a commodity such as soybean biodiesel must be cost-effective, necessitating an efficient manufacturing process for SGases. This review summarizes the identification of microbial SGases and their applications, discusses biodiesel refining processes and the development of analytical methods for identifying and quantifying SGs in foods and biodiesel, and considers technologies for strain engineering and process optimization for the heterologous production of a SGase from Thermococcus litoralis. All of these technologies might be used for the production of other thermostable enzymes. Structural features of SGases and the feasibility of protein engineering for novel applications are explored.


Subject(s)
Biotechnology/methods , Glucosidases/biosynthesis , Glucosidases/chemistry , Biofuels , Cellulases/biosynthesis , Cellulases/chemistry , Cellulases/genetics , Enzyme Stability , Glucosidases/genetics , Hot Temperature , Hydrolysis , Protein Engineering , Solvents/chemistry , Glycine max
5.
Bioprocess Biosyst Eng ; 41(4): 555-564, 2018 Apr.
Article in English | MEDLINE | ID: mdl-29322256

ABSTRACT

Biodiesels produced from vegetable oils have a major quality problem due to the presence of steryl glucosides (SGs), which form precipitates that clog filters and cause engine failures. Recently, we described an enzymatic process for removing SGs from biodiesel. However, industrial adoption of this technology was hindered by the cost of the steryl glucosidase (SGase) enzyme used. Here we report the development and validation at the pilot scale of a cost-efficient process for manufacturing the SGase. First, we tested various low-cost carbon sources for the Escherichia coli producing strain, ultimately developing a fed-batch fermentation process that utilizes crude glycerol as a feedstock. Next, we designed an efficient process for isolating the SGase. That process uses a novel thermolysis approach in the presence of a non-ionic detergent, centrifugation to separate the solids, and ultrafiltration to concentrate and formulate the final product. Our cost analysis indicates that on a large scale, the dose of enzyme required to eliminate SGs from each ton of biodiesel will have a manufacturing cost below $1. The new process for manufacturing the SGase, which will lead to biodiesels of a higher quality, should contribute to facilitate the global adoption of this renewable fuel. Our technology could also be used to manufacture other thermostable proteins in E. coli.


Subject(s)
Biofuels , Escherichia coli/enzymology , Glucosidases/chemistry , Glucosides/chemistry , Escherichia coli/genetics , Glucosidases/genetics , Recombinant Proteins/chemistry , Recombinant Proteins/genetics
6.
Mol Neurobiol ; 53(9): 6316-6331, 2016 11.
Article in English | MEDLINE | ID: mdl-26567110

ABSTRACT

Neuronal differentiation plays a key role during embryogenesis. However, based on the capacity of neuronal stem cells to either generate or regenerate neurons and because differentiation stops aberrant neuroblasts proliferation, neuronal differentiation is crucial during neuropathological conditions. Although phosphatidylcholine (PtdCho) has been proposed as an important molecule for neurite growth and neuronal regeneration, the identity of the molecular target has remained elusive. This study originally describes that lysophosphatidylcholine (LPtdCho), either exogenously supplied or generated by the imbalance of PtdCho metabolism through the enzymatic action of cytosolic phospholipase A2, acts as a neurotrophic-like factor. We demonstrated that LPtdCho induces neuronal differentiation by activation of the small G protein Ras followed by the Raf/MEK/ERK signaling pathway. Accordingly, LPtdCho redirects neuroblasts gene expression leading to the generation of functional mature neurons expressing ßIII-tubulin and having increased acetylcholinesterase activity and membrane biosynthesis required for neuritogenesis. These findings provide mechanistic details of the role of cytidine-5-diphosphocholine (CDP-choline) and PtdCho as neuroprotectors. Furthermore, as LPtdCho recapitulates the effect of the therapeutic agent retinoic acid, these results open new avenues for drug discovery for the treatment of neuropathological conditions.


Subject(s)
Cell Lineage , Lysophosphatidylcholines/pharmacology , Neurons/cytology , Neurons/metabolism , Animals , Biomarkers/metabolism , Calcium/metabolism , Cell Differentiation/drug effects , Cell Line, Tumor , Cell Lineage/drug effects , Humans , Lysophosphatidylcholines/metabolism , MAP Kinase Signaling System/drug effects , Mice , Models, Biological , Neurons/drug effects , Neurons/enzymology , Phosphatidylcholines/metabolism , Phospholipases A2, Cytosolic/metabolism , Second Messenger Systems , Tretinoin/pharmacology , ras Proteins/metabolism
7.
J Cell Biol ; 209(3): 435-52, 2015 May 11.
Article in English | MEDLINE | ID: mdl-25940347

ABSTRACT

During the late stages of the HIV-1 replication cycle, the viral polyprotein Pr55(Gag) is recruited to the plasma membrane (PM), where it binds phosphatidylinositol 4,5-bisphosphate (PI(4,5)P2) and directs HIV-1 assembly. We show that Rab27a controls the trafficking of late endosomes carrying phosphatidylinositol 4-kinase type 2 α (PI4KIIα) toward the PM of CD4(+) T cells. Hence, Rab27a promotes high levels of PM phosphatidylinositol 4-phosphate and the localized production of PI(4,5)P2, therefore controlling Pr55(Gag) membrane association. Rab27a also controls PI(4,5)P2 levels at the virus-containing compartments of macrophages. By screening Rab27a effectors, we identified that Slp2a, Slp3, and Slac2b are required for the association of Pr55(Gag) with the PM and that Slp2a cooperates with Rab27a in the recruitment of PI4KIIα to the PM. We conclude that by directing the trafficking of PI4KIIα-positive endosomes toward the PM, Rab27a controls PI(4,5)P2 production and, consequently, HIV-1 replication.


Subject(s)
Cell Membrane/metabolism , HIV-1/physiology , Phosphatidylinositol 4,5-Diphosphate/metabolism , Virus Assembly/physiology , Virus Replication/physiology , rab GTP-Binding Proteins/metabolism , Biological Transport, Active/genetics , Cell Membrane/genetics , Cell Membrane/virology , Endosomes/genetics , Endosomes/metabolism , Endosomes/virology , Humans , Jurkat Cells , Macrophages/metabolism , Macrophages/virology , Membrane Proteins/metabolism , Minor Histocompatibility Antigens , Phosphatidylinositol 4,5-Diphosphate/genetics , Phosphotransferases (Alcohol Group Acceptor)/metabolism , gag Gene Products, Human Immunodeficiency Virus/genetics , gag Gene Products, Human Immunodeficiency Virus/metabolism , rab GTP-Binding Proteins/genetics , rab27 GTP-Binding Proteins
8.
IUBMB Life ; 63(9): 714-20, 2011 Sep.
Article in English | MEDLINE | ID: mdl-21818839

ABSTRACT

Neuronal differentiation is characterized by neuritogenesis and neurite outgrowth, processes, which are critically dependent on membrane biosynthesis, and therefore, on the expression and regulation of enzymes involved in phospholipid biosynthesis. During the last decade a great effort was made to clarify where membrane lipids are synthesized, how the newly synthesized membrane components reach the membrane and are inserted during neuritogenesis and to elucidate the mechanism by which the supply of new membrane components is coordinated with the demand for growth. Phosphatidylcholine is the principal and essential component for mammalian membranes. This review updates the mechanism by which phosphatidylcholine biosynthesis takes place and how it is coordinately regulated during neuronal differentiation.


Subject(s)
Cell Differentiation/physiology , Cell Membrane/metabolism , Neurites/physiology , Neurons/metabolism , Phosphatidylcholines/biosynthesis , Phosphatidylcholines/metabolism , Animals , Choline Kinase/metabolism , Choline-Phosphate Cytidylyltransferase/metabolism , Diacylglycerol Cholinephosphotransferase/metabolism , Humans , Mammals , Models, Biological , Neurons/cytology
9.
J Biol Chem ; 285(33): 25382-93, 2010 Aug 13.
Article in English | MEDLINE | ID: mdl-20525991

ABSTRACT

Neuronal differentiation is characterized by neuritogenesis and neurite outgrowth, processes that are dependent on membrane biosynthesis. Thus, the production of phosphatidylcholine (PtdCho), the major membrane phospholipid, should be stimulated during neuronal differentiation. We demonstrate that during retinoic acid (RA)-induced differentiation of Neuro-2a cells, PtdCho synthesis was promoted by an ordered and sequential activation of choline kinase alpha (CK(alpha)) and choline cytidylyltransferase alpha (CCT(alpha)). Early after RA stimulation, the increase in PtdCho synthesis is mainly governed by the biochemical activation of CCT(alpha). Later, the transcription of CK(alpha)- and CCT(alpha)-encoding genes was induced. Both PtdCho biosynthesis and neuronal differentiation are dependent on ERK activation. A novel mechanism is proposed by which PtdCho biosynthesis is coordinated during neuronal differentiation. Enforced expression of either CK(alpha) or CCTalpha increased the rate of synthesis and the amount of PtdCho, and these cells initiated differentiation without RA stimulation, as evidenced by cell morphology and the expression of genes associated with neuritogenesis. The differentiation resulting from enforced expression of CCT(alpha) or CK(alpha) was dependent on persistent ERK activation. These results indicate that elevated PtdCho synthesis could mimic the RA signals and thus determine neuronal cell fate. Moreover, they could explain the key role that PtdCho plays during neuronal regeneration.


Subject(s)
Neurons/cytology , Neurons/metabolism , Phosphatidylcholines/biosynthesis , Animals , Blotting, Western , Cell Differentiation/drug effects , Cell Line, Tumor , Choline Kinase/genetics , Choline-Phosphate Cytidylyltransferase/genetics , Fluorescent Antibody Technique , Mice , Neurons/drug effects , Neurons/enzymology , Oligonucleotide Array Sequence Analysis , Phosphatidylcholines/physiology , Signal Transduction/drug effects , Signal Transduction/genetics , Tretinoin/pharmacology
10.
J Bacteriol ; 189(16): 5816-24, 2007 Aug.
Article in English | MEDLINE | ID: mdl-17557823

ABSTRACT

plsX (acyl-acyl carrier protein [ACP]:phosphate acyltransferase), plsY (yneS) (acyl-phosphate:glycerol-phosphate acyltransferase), and plsC (yhdO) (acyl-ACP:1-acylglycerol-phosphate acyltransferase) function in phosphatidic acid formation, the precursor to membrane phospholipids. The physiological functions of these genes was inferred from their in vitro biochemical activities, and this study investigated their roles in gram-positive phospholipid metabolism through the analysis of conditional knockout strains in the Bacillus subtilis model system. The depletion of PlsX led to the cessation of both fatty acid synthesis and phospholipid synthesis. The inactivation of PlsY also blocked phospholipid synthesis, but fatty acid formation continued due to the appearance of acylphosphate intermediates and fatty acids arising from their hydrolysis. Phospholipid synthesis ceased following PlsC depletion, but fatty acid synthesis continued at a high rate, leading to the accumulation of fatty acids arising from the dephosphorylation of 1-acylglycerol-3-P followed by the deacylation of monoacylglycerol. Analysis of glycerol 3-P acylation in B. subtilis membranes showed that PlsY was an acylphosphate-specific acyltransferase, whereas PlsC used only acyl-ACP as an acyl donor. PlsX was found in the soluble fraction of disrupted cells but was associated with the cell membrane in intact organisms. These data establish that PlsX is a key enzyme that coordinates the production of fatty acids and membrane phospholipids in B. subtilis.


Subject(s)
Bacillus subtilis/metabolism , Bacterial Proteins/metabolism , Fatty Acids/biosynthesis , Phospholipids/biosynthesis , Bacillus subtilis/genetics , Genes, Bacterial
11.
Dev Cell ; 4(5): 663-72, 2003 May.
Article in English | MEDLINE | ID: mdl-12737802

ABSTRACT

Bacterial cells exert exquisite control over the biosynthesis of their membrane lipids, but the mechanisms are obscure. We describe the identification and purification from Bacillus subtilis of a transcription factor, FapR, that controls the expression of many genes involved in fatty acid and phospholipid metabolism (the fap regulon). Expression of this fap regulon is influenced by antibiotics that specifically inhibit the fatty acid biosynthetic pathway. We show that FapR negatively regulates fap expression and that the effects of antibiotics on fap expression are mediated by FapR. We further show that decreasing the cellular levels of malonyl-CoA, an essential molecule for fatty acid elongation, inhibits expression of the fap regulon and that this effect is FapR dependent. Our results indicate that control of FapR by the cellular pools of malonyl-CoA provides a mechanism for sensing the status of fatty acid biosynthesis and to adjust the expression of the fap regulon accordingly.


Subject(s)
Bacillus subtilis , Escherichia coli Proteins/genetics , Escherichia coli Proteins/metabolism , Membrane Lipids/biosynthesis , Transcription Factors/genetics , Transcription Factors/metabolism , Amino Acid Sequence , Bacillus subtilis/genetics , Bacillus subtilis/metabolism , Base Sequence , Cell Division , Conserved Sequence/genetics , DNA-Binding Proteins/chemistry , DNA-Binding Proteins/genetics , DNA-Binding Proteins/isolation & purification , DNA-Binding Proteins/metabolism , Escherichia coli Proteins/chemistry , Escherichia coli Proteins/isolation & purification , Fatty Acids/biosynthesis , Fatty Acids/chemistry , Gene Deletion , Gene Expression Regulation, Bacterial , Malonyl Coenzyme A/metabolism , Membrane Lipids/chemistry , Molecular Sequence Data , Promoter Regions, Genetic/genetics , Sequence Homology, Amino Acid , Time Factors , Transcription Factors/chemistry , Transcription Factors/isolation & purification , Transcription, Genetic
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