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1.
Clin Lymphoma Myeloma Leuk ; 22(11): 847-852, 2022 11.
Article in English | MEDLINE | ID: mdl-35985959

ABSTRACT

The phase 1b 16-BCNI-001/CTRIAL-IE 16-02 CyBorD-DARA trial investigated the combination of Daratumumab with cyclophosphamide, bortezomib and dexamethasone in patients with newly diagnosed multiple myeloma (NDMM), followed by autologous stem cell transplantation and Daratumumab maintenance. CR/sCR rates were 50% after transplant and 62.5% at end of treatment. The overall percentage of patients achieving complete response or better was 77.8%. Progression-free survival rate at end of maintenance was 81.3% and estimated 2-year overall survival was 88.9%. 37.5% of patients demonstrated sustained MRD negativity to a level of 10-5 from transplant to analysis at EOT. In this phase 1b study, we have shown CyBorD-DARA to be an effective and well-tolerated immunomodulatory agent-free regiment in transplant-eligible NDMM.


Subject(s)
Antineoplastic Combined Chemotherapy Protocols , Multiple Myeloma , Humans , Antineoplastic Combined Chemotherapy Protocols/therapeutic use , Bortezomib/therapeutic use , Cyclophosphamide/therapeutic use , Dexamethasone/therapeutic use , Hematopoietic Stem Cell Transplantation/methods , Multiple Myeloma/drug therapy , Transplantation, Autologous , Treatment Outcome
2.
Blood Adv ; 3(12): 1815-1825, 2019 06 25.
Article in English | MEDLINE | ID: mdl-31201169

ABSTRACT

Daratumumab (DARA) has shown impressive activity in combination with other agents for the treatment of multiple myeloma (MM). We conducted a phase 1b study to assess the safety and preliminary efficacy, as well as potential mechanisms of action, of DARA (16 mg/kg) in combination with a weekly schedule of subcutaneous bortezomib (1.3-1.5 mg/m2), cyclophosphamide (150-300 mg/m2), and dexamethasone (40 mg) (CyBorD DARA) as initial induction before autologous stem cell transplantation (ASCT). Eligible patients were ≤70 years of age with untreated MM requiring treatment and who lacked significant comorbidities. A total of 18 patients were enrolled. Their median age was 56 years (range, 32-66 years), and all patients had Eastern Cooperative Oncology Group performance status ≤1. The International Staging System stages were I, II, and III in 78%, 17%, and 6% of patients, respectively; 28% of patients had high-risk genetic features. There was no dose-limiting toxicity, and the incidence of grade 3 or 4 infection or neutropenia was <10%. On an intention-to-treat basis, 94% achieved ≥very good partial response with ≥complete response in 44% of patients. Among 14 of 15 patients who underwent ASCT and were evaluable for response, all 14 achieved at least very good partial response, with 8 (57%) of 14 achieving complete response. After ASCT, 10 (83%) of 12 patients in whom minimal residual disease analysis was possible were negative at a sensitivity of 10-5 (56% on intention-to-treat/whole study population) according to next-generation sequencing. Flow cytometry analysis of patient samples indicated CyBorD DARA induced activation of macrophage-mediated antibody-dependent cellular phagocytosis. This trial was registered at www.clinicaltrials.gov as #NCT02955810.


Subject(s)
Antibodies, Monoclonal/therapeutic use , Multiple Myeloma/drug therapy , Adult , Aged , Antibodies, Monoclonal/administration & dosage , Antibodies, Monoclonal/pharmacology , Antineoplastic Agents, Alkylating/administration & dosage , Antineoplastic Agents, Alkylating/therapeutic use , Antineoplastic Agents, Hormonal/administration & dosage , Antineoplastic Agents, Hormonal/therapeutic use , Antineoplastic Combined Chemotherapy Protocols , Bortezomib/administration & dosage , Bortezomib/therapeutic use , Cyclophosphamide/administration & dosage , Cyclophosphamide/therapeutic use , Dexamethasone/administration & dosage , Dexamethasone/therapeutic use , Female , Hematopoietic Stem Cell Transplantation , Humans , Incidence , Infections/chemically induced , Infections/epidemiology , Injections, Subcutaneous , Ireland/epidemiology , Male , Middle Aged , Neutropenia/chemically induced , Neutropenia/epidemiology , Proteasome Inhibitors/administration & dosage , Proteasome Inhibitors/therapeutic use , Transplantation, Autologous , Treatment Outcome
3.
Acta Oncol ; 57(7): 965-972, 2018 Jul.
Article in English | MEDLINE | ID: mdl-29419331

ABSTRACT

BACKGROUND: The optimal primary external beam radiation therapy (EBRT) radiation schedule for malignant epidural spinal cord compression (MSCC) remains to be determined. The ICORG 05-03 trial assessed if a 10 Gy single fraction radiation schedule was not inferior to one with 20 Gray (Gy) in five daily fractions, in terms of functional motor outcome, for the treatment of MSCC in patients not proceeding with surgical decompression. This article reports on two of the secondary endpoints, Quality of life (QoL), assessed according to the European Organization for Research and Treatment of Cancer (EORTC) Quality of Life Questionnaire Core 30 (QLQ-C30) version 3.0 (EORTC Data Center, Brussels, Belgium) and pain control assessed using a visual analog scale. METHODS: A randomized, parallel group, multicenter phase III trial was conducted by Cancer Trials Ireland (formerly All-Ireland Cooperative Oncology Research Group, ICORG), across five hospital sites in Ireland and Northern Ireland. Patients were randomized to 10 Gy single fraction of EBRT or 20 Gy in five fractions in a 1:1 ratio. Patients with baseline and 5-week follow up QoL data are included in this analysis. FINDINGS: From 2006 to 2014, 112 eligible patients were enrolled for whom 57 were evaluated for this secondary analysis. After adjusting for pre-intervention scores, there was no statistically significant difference in post-treatment Summary scores (excl. FI and QL), or pain scores between the two RT schedules at 5 weeks and 3 months following EBRT. There was a statistically significant relationship between the pretreatment and post-treatment Summary scores (p = .002) but not between the pre-treatment and post-treatment pain scores. INTERPRETATION: Primary radiotherapy for the treatment of MSCC significantly improves QoL in patients not proceeding with surgical decompression. After adjusting for pre-intervention scores, there was no statistically significant difference between a 10 Gy single fraction radiation schedule and one with 20 Gy in five daily fractions on post-treatment QoL Summary scores. For most patients, an effective treatment with low burden would be desirable. A single fraction schedule should be considered for this group of patients.


Subject(s)
Dose Fractionation, Radiation , Neoplasms/radiotherapy , Quality of Life , Spinal Cord Compression/radiotherapy , Aged , Aged, 80 and over , Equivalence Trials as Topic , Female , Humans , Male , Middle Aged , Neoplasms/complications , Neoplasms/pathology , Spinal Cord Compression/etiology , Treatment Outcome
4.
PLoS One ; 12(7): e0181602, 2017.
Article in English | MEDLINE | ID: mdl-28715479

ABSTRACT

PURPOSE/OBJECTIVES: Retention and recruitment of part time clinical adjunct faculty members in dental education is becoming increasingly difficult as dental schools come to rely on this workforce for their increased involvement in clinical education. Contributing factors include full time faculty shortage, aging workforce, practice and student debt, practice and family commitments, and financial compensation. This study attempts to ascertain barriers to teaching so appropriate strategies can be formulated to address this issue. METHODS: In the spring of 2016 an email survey was sent to current and former adjunct faculty members to ascertain demographics and retention and recruitment strategies. Descriptive analyses were completed for all variables in the sample. RESULTS: Twenty nine of forty six subjects responded to the survey with a response rate of 63%. Subjects over the age of sixty comprised 55% with only 17% being under the age of forty five. Overall family and practice commitments along with compensation were the primary barriers to teaching part time. For new dentists, student loan debt was the primary barrier to teaching. Travel to teach was also a barrier as 70% of respondents drove 200 miles or less to the dental school. CONCLUSION: The study demonstrated that the aging part time work force is a great concern and new part time clinical adjunct faculty members must be recruited. Barriers to recruitment and retention of faculty must be considered and addressed to sustain this teaching model.


Subject(s)
Dentists , Education, Dental , Faculty , Personnel Selection , Personnel Turnover , Schools, Dental , Adult , Age Factors , Aged , Aged, 80 and over , Dentists/economics , Education, Dental/economics , Family , Female , Humans , Iowa , Male , Middle Aged , Motivation , Pilot Projects , Surveys and Questionnaires , Training Support/economics , Travel , Workforce
5.
BMC Cancer ; 17(1): 401, 2017 06 03.
Article in English | MEDLINE | ID: mdl-28578652

ABSTRACT

BACKGROUND: Neoadjuvant therapy is increasingly the standard of care in the management of locally advanced adenocarcinoma of the oesophagus and junction (AEG). In randomised controlled trials (RCTs), the MAGIC regimen of pre- and postoperative chemotherapy, and the CROSS regimen of preoperative chemotherapy combined with radiation, were superior to surgery only in RCTs that included AEG but were not powered on this cohort. No completed RCT has directly compared neoadjuvant or perioperative chemotherapy and neoadjuvant chemoradiation. The Neo-AEGIS trial, uniquely powered on AEG, and including comprehensive modern staging, compares both these regimens. METHODS: This open label, multicentre, phase III RCT randomises patients (cT2-3, N0-3, M0) in a 1:1 fashion to receive CROSS protocol (Carboplatin and Paclitaxel with concurrent radiotherapy, 41.4Gy/23Fr, over 5 weeks). The power calculation is a 10% difference in favour of CROSS, powered at 80%, two-sided alpha level of 0.05, requiring 540 patients to be evaluable, 594 to be recruited if a 10% dropout is included (297 in each group). The primary endpoint is overall survival, with a minimum 3-year follow up. Secondary endpoints include: disease free survival, recurrence rates, clinical and pathological response rates, toxicities of induction regimens, post-operative pathology and tumour regression grade, operative in-hospital complications, and health-related quality of life. The trial also affords opportunities for establishing a bio-resource of pre-treatment and resected tumour, and translational research. DISCUSSION: This RCT directly compares two established treatment regimens, and addresses whether radiation therapy positively impacts on overall survival compared with a standard perioperative chemotherapy regimen Sponsor: Irish Clinical Research Group (ICORG). TRIAL REGISTRATION: NCT01726452 . Protocol 10-14. Date of registration 06/11/2012.


Subject(s)
Adenocarcinoma/drug therapy , Esophageal Neoplasms/drug therapy , Esophagogastric Junction/drug effects , Neoplasm Recurrence, Local/drug therapy , Adenocarcinoma/pathology , Adenocarcinoma/radiotherapy , Adult , Aged , Antineoplastic Combined Chemotherapy Protocols/administration & dosage , Carboplatin/administration & dosage , Disease-Free Survival , Esophageal Neoplasms/pathology , Esophageal Neoplasms/radiotherapy , Esophagogastric Junction/pathology , Female , Humans , Male , Middle Aged , Neoadjuvant Therapy , Neoplasm Recurrence, Local/pathology , Neoplasm Recurrence, Local/radiotherapy , Paclitaxel/administration & dosage , Quality of Life
6.
Transl Psychiatry ; 5: e643, 2015 Sep 22.
Article in English | MEDLINE | ID: mdl-26393489

ABSTRACT

Autism spectrum disorder (ASD) affects 2% of children, and is characterized by impaired social and communication skills together with repetitive, stereotypic behavior. The pathophysiology of ASD is complex due to genetic and environmental heterogeneity, complicating the development of therapies and making diagnosis challenging. Growing genetic evidence supports a role of disrupted Ca(2+) signaling in ASD. Here, we report that patient-derived fibroblasts from three monogenic models of ASD-fragile X and tuberous sclerosis TSC1 and TSC2 syndromes-display depressed Ca(2+) release through inositol trisphosphate receptors (IP3Rs). This was apparent in Ca(2+) signals evoked by G protein-coupled receptors and by photoreleased IP3 at the levels of both global and local elementary Ca(2+) events, suggesting fundamental defects in IP3R channel activity in ASD. Given the ubiquitous involvement of IP3R-mediated Ca(2+) signaling in neuronal excitability, synaptic plasticity, gene expression and neurodevelopment, we propose dysregulated IP3R signaling as a nexus where genes altered in ASD converge to exert their deleterious effect. These findings highlight potential pharmaceutical targets, and identify Ca(2+) screening in skin fibroblasts as a promising technique for early detection of individuals susceptible to ASD.


Subject(s)
Autism Spectrum Disorder , Calcium Signaling/physiology , Fibroblasts , Inositol 1,4,5-Trisphosphate Receptors/metabolism , Autism Spectrum Disorder/diagnosis , Autism Spectrum Disorder/genetics , Autism Spectrum Disorder/metabolism , Fibroblasts/metabolism , Fibroblasts/pathology , Fragile X Mental Retardation Protein/genetics , Humans , Models, Genetic , Neural Conduction/physiology , Neuronal Plasticity/physiology , Receptors, G-Protein-Coupled/metabolism , Reproducibility of Results , Signal Transduction , Skin Physiological Phenomena , Tuberous Sclerosis Complex 1 Protein , Tuberous Sclerosis Complex 2 Protein , Tumor Suppressor Proteins/genetics
7.
Mol Psychiatry ; 20(11): 1286-93, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26100538

ABSTRACT

Huntington's disease (HD), a progressive neurodegenerative disease, is caused by an expanded CAG triplet repeat producing a mutant huntingtin protein (mHTT) with a polyglutamine-repeat expansion. Onset of symptoms in mutant huntingtin gene-carrying individuals remains unpredictable. We report that synthetic polyglutamine oligomers and cerebrospinal fluid (CSF) from BACHD transgenic rats and from human HD subjects can seed mutant huntingtin aggregation in a cell model and its cell lysate. Our studies demonstrate that seeding requires the mutant huntingtin template and may reflect an underlying prion-like protein propagation mechanism. Light and cryo-electron microscopy show that synthetic seeds nucleate and enhance mutant huntingtin aggregation. This seeding assay distinguishes HD subjects from healthy and non-HD dementia controls without overlap (blinded samples). Ultimately, this seeding property in HD patient CSF may form the basis of a molecular biomarker assay to monitor HD and evaluate therapies that target mHTT.


Subject(s)
Huntington Disease/cerebrospinal fluid , Huntington Disease/genetics , Mutation , Nerve Tissue Proteins/genetics , Peptides/cerebrospinal fluid , Protein Aggregation, Pathological/cerebrospinal fluid , Animals , Cells, Cultured , Female , Humans , Huntingtin Protein , Male , Microscopy, Electron , Protein Aggregation, Pathological/pathology , Rats , Rats, Transgenic , Transfection
8.
Colorectal Dis ; 16(1): O16-25, 2014 Jan.
Article in English | MEDLINE | ID: mdl-24119076

ABSTRACT

AIM: To date, there is no uniform consensus on whether tumour regression grade (TRG) is predictive of outcome in rectal cancer. Furthermore, the lack of standardization of TRG grading is a major source of variability in published studies. The aim of this study was to evaluate the prognostic impact of TRG in a cohort of patients with locally advanced rectal cancer treated with neoadjuvant chemoradiation therapy (CRT). In addition to the Mandard TRG, we utilized four TRG systems modified from the Mandard TRG system and applied them to the cohort to assess which TRG system is most informative. METHOD: One-hundred and fifty-three patients with a T3/T4 and/or a node-positive rectal cancer underwent neoadjuvant 5-fluorouracil-based CRT followed by surgical resection. RESULTS: Thirty-six (23.5%) patients achieving complete pathological response (ypCR) had a 5-year disease-free survival (DFS) rate of 100% compared with a DFS rate of 74% for 117 (76.5%) patients without ypCR (P = 0.003). The Royal College of Pathologists (RCPath) TRG best condenses the Mandard five-point TRG by stratifying patients into three groups with distinct 5-year DFS rates of 100%, 86% and 67%, respectively (P = 0.001). In multivariate analysis, pathological nodal status and circumferential resection margin (CRM) status, but not TRG, remained significant predictors of DFS (P = 0.002, P = 0.035 and P = 0.310, respectively). CONCLUSION: Our findings support the notion that ypCR status, nodal status after neoadjuvant CRT and CRM status, but not TRG, are predictors of long-term survival in patients with locally advanced rectal cancer.


Subject(s)
Adenocarcinoma/pathology , Chemoradiotherapy , Lymph Nodes/pathology , Neoadjuvant Therapy , Rectal Neoplasms/pathology , Adenocarcinoma/therapy , Adult , Aged , Aged, 80 and over , Antimetabolites, Antineoplastic/therapeutic use , Disease-Free Survival , Female , Fluorouracil/therapeutic use , Humans , Lymph Node Excision , Male , Middle Aged , Multivariate Analysis , Neoplasm Staging , Prognosis , Proportional Hazards Models , Rectal Neoplasms/therapy , Remission Induction , Treatment Outcome , Tumor Burden , Young Adult
9.
Biophys J ; 97(4): 992-1002, 2009 Aug 19.
Article in English | MEDLINE | ID: mdl-19686646

ABSTRACT

Intracellular Ca(2+) release is a versatile second messenger system. It is modeled here by reaction-diffusion equations for the free Ca(2+) and Ca(2+) buffers, with spatially discrete clusters of stochastic IP(3) receptor channels (IP(3)Rs) controlling the release of Ca(2+) from the endoplasmic reticulum. IP(3)Rs are activated by a small rise of the cytosolic Ca(2+) concentration and inhibited by large concentrations. Buffering of cytosolic Ca(2+) shapes global Ca(2+) transients. Here we use a model to investigate the effect of buffers with slow and fast reaction rates on single release spikes. We find that, depending on their diffusion coefficient, fast buffers can either decouple clusters or delay inhibition. Slow buffers have little effect on Ca(2+) release, but affect the time course of the signals from the fluorescent Ca(2+) indicator mainly by competing for Ca(2+). At low [IP(3)], fast buffers suppress fluorescence signals, slow buffers increase the contrast between bulk signals and signals at open clusters, and large concentrations of buffers, either fast or slow, decouple clusters.


Subject(s)
Calcium Signaling/physiology , Calcium/metabolism , Cell Membrane/physiology , Inositol 1,4,5-Trisphosphate Receptors/metabolism , Ion Channel Gating/physiology , Models, Biological , Buffers , Computer Simulation
10.
J Evol Biol ; 21(4): 1117-24, 2008 Jul.
Article in English | MEDLINE | ID: mdl-18462314

ABSTRACT

An enduring puzzle in gynodioecious species is the great variation in female frequency seen among populations. We quantified sex ratio in 44 populations of gynodioecious Kallstroemia grandiflora. Then, we measured pollinator visitation, pollen deposition, autonomous selfing rate and pollen limitation of females. Finally, using experimental populations, we tested whether female fitness responds to the frequency of female plants. We found broad variability in sex ratio among populations (0-44% female). Hermaphrodite flowers received more pollinator visits and pollen grains than females, and bagged hermaphrodite flowers produced fruits. However, we found no evidence of pollen limitation in females. In experimental populations, female plants showed no evidence of frequency-dependent pollinator visitation, fruit set, seed set or total seed mass. These results do not support frequency-dependent variation in fitness as a major mechanism affecting female frequencies in K. grandiflora. Within the context of this study, pollinators are abundant and pollinator movement appears to operate at a large enough scale to overcome the potential reproductive disadvantages of producing solely female flowers.


Subject(s)
Zygophyllaceae/anatomy & histology , Zygophyllaceae/physiology , Ecology , Fruit , Mexico , Pollen , Reproduction/physiology , Seeds , Sex Ratio
11.
Mol Ecol ; 17(1): 431-49, 2008 Jan.
Article in English | MEDLINE | ID: mdl-17908213

ABSTRACT

Invasive species are predicted to suffer from reductions in genetic diversity during founding events, reducing adaptive potential. Integrating evidence from two literature reviews and two case studies, we address the following questions: How much genetic diversity is lost in invasions? Do multiple introductions ameliorate this loss? Is there evidence for loss of diversity in quantitative traits? Do invaders that have experienced strong bottlenecks show adaptive evolution? How do multiple introductions influence adaptation on a landscape scale? We reviewed studies of 80 species of animals, plants, and fungi that quantified nuclear molecular diversity within introduced and source populations. Overall, there were significant losses of both allelic richness and heterozygosity in introduced populations, and large gains in diversity were rare. Evidence for multiple introductions was associated with increased diversity, and allelic variation appeared to increase over long timescales (~100 years), suggesting a role for gene flow in augmenting diversity over the long-term. We then reviewed the literature on quantitative trait diversity and found that broad-sense variation rarely declines in introductions, but direct comparisons of additive variance were lacking. Our studies of Hypericum canariense invasions illustrate how populations with diminished diversity may still evolve rapidly. Given the prevalence of genetic bottlenecks in successful invading populations and the potential for adaptive evolution in quantitative traits, we suggest that the disadvantages associated with founding events may have been overstated. However, our work on the successful invader Verbascum thapsus illustrates how multiple introductions may take time to commingle, instead persisting as a 'mosaic of maladaptation' where traits are not distributed in a pattern consistent with adaptation. We conclude that management limiting gene flow among introduced populations may reduce adaptive potential but is unlikely to prevent expansion or the evolution of novel invasive behaviour.


Subject(s)
Adaptation, Biological/genetics , Biological Evolution , Demography , Founder Effect , Genetic Variation , Amplified Fragment Length Polymorphism Analysis , Gene Flow/genetics , Geography , Hypericum/genetics , Microsatellite Repeats/genetics , Population Dynamics , Quantitative Trait, Heritable , Random Amplified Polymorphic DNA Technique , Species Specificity , Verbascum/genetics
12.
Biochem Soc Trans ; 35(Pt 5): 1109-13, 2007 Nov.
Article in English | MEDLINE | ID: mdl-17956290

ABSTRACT

The PI3K (phosphoinositide 3-kinase) family of lipid kinases regulate cell motility in diverse organisms and cell types. In mammals, the main PI3K enzyme activated by chemokine receptor signalling is the class IB isoform, p110gamma. Studies of p110gamma-knockout mice have shown an essential function for this isoform in chemotaxis of neutrophils and macrophages both in vitro and in vivo. However, the roles of p110gamma and other PI3K enzymes and regulatory subunits in lymphocyte motility have been more difficult to discern. Recent studies of adoptively transferred, fluorescently labelled lymphocytes have revealed complex and unexpected functions for PI3K in lymphocyte migration in vivo. In this review we highlight cell-type-specific roles for PI3K catalytic and regulatory subunits in the homing and basal motility of lymphocytes in the intact lymph node.


Subject(s)
Chemotaxis, Leukocyte , Lymphocytes/cytology , Phosphatidylinositol 3-Kinases/metabolism , Animals , Lymphocytes/enzymology , Lymphoid Tissue/cytology , Mice , Mice, Knockout
13.
Mol Ecol ; 16(20): 4269-83, 2007 Oct.
Article in English | MEDLINE | ID: mdl-17850270

ABSTRACT

To understand the success of invasive species, it is important to know whether colonization events are facilitated by adaptive evolution or are limited to sites where a species is pre-adapted to thrive. Studies of the ancient colonization patterns of an invader in its native range provide an opportunity to examine its natural history of adaptation and colonization. This study uses molecular (internal transcribed spacer sequence and amplified fragment length polymorphism) and common garden approaches to assess the ancient patterns of establishment and quantitative trait evolution in the invasive shrub Hypericum canariense. This species has an unusually small and discrete native range in the Canary Islands. Our data reveal two genetic varieties with divergent life histories and different colonization patterns across the islands. Although molecular divergence within each variety is large (pairwise FST from 0.18 to 0.32 between islands) and nearly as great as divergence between them, life-history traits show striking uniformity within varieties. The discrepancy between molecular and life-history trait divergence points to the action of stabilizing selection within varieties and the influence of pre-adaptation on patterns of colonization. The colonization history of H. canariense reflects how the relationship between selective environments in founding and source populations can dictate establishment by particular lineages and their subsequent evolutionary stasis or change.


Subject(s)
Genetic Variation , Hypericum/genetics , Quantitative Trait, Heritable , Adaptation, Physiological/genetics , Africa , DNA, Plant/genetics , Europe , Geography , Hypericum/classification , Hypericum/growth & development , Linkage Disequilibrium , Phenotype , Phylogeny , Polymorphism, Restriction Fragment Length , Selection, Genetic
14.
Biophys J ; 93(6): 1847-57, 2007 Sep 15.
Article in English | MEDLINE | ID: mdl-17496042

ABSTRACT

Intracellular calcium release is a prime example for the role of stochastic effects in cellular systems. Recent models consist of deterministic reaction-diffusion equations coupled to stochastic transitions of calcium channels. The resulting dynamics is of multiple time and spatial scales, which complicates far-reaching computer simulations. In this article, we introduce a novel hybrid scheme that is especially tailored to accurately trace events with essential stochastic variations, while deterministic concentration variables are efficiently and accurately traced at the same time. We use finite elements to efficiently resolve the extreme spatial gradients of concentration variables close to a channel. We describe the algorithmic approach and we demonstrate its efficiency compared to conventional methods. Our single-channel model matches experimental data and results in intriguing dynamics if calcium is used as charge carrier. Random openings of the channel accumulate in bursts of calcium blips that may be central for the understanding of cellular calcium dynamics.


Subject(s)
Calcium Signaling/physiology , Models, Biological , Algorithms , Biophysical Phenomena , Biophysics , Computer Simulation , Inositol 1,4,5-Trisphosphate Receptors/metabolism , Ion Channel Gating/physiology , Patch-Clamp Techniques , Stochastic Processes
15.
Cell Calcium ; 30(6): 383-93, 2001 Dec.
Article in English | MEDLINE | ID: mdl-11728133

ABSTRACT

We describe the construction of a video-rate two-photon laser scanning microscope, compare its performance to a similar confocal microscope, and illustrate its use for imaging local Ca(2+) transients from cortical neurons in brain slices. Key features include the use of a Ti-sapphire femtosecond laser allowing continuous tuning over a wide (700-1000 nm) wavelength range, a resonant scanning mirror to permit frame acquisition at 30 Hz, and efficient wide-field fluorescence detection. Two-photon imaging provides compelling advantages over confocal microscopy in terms of improved imaging depth and reduced phototoxicity and photobleaching, but the high cost of commercial instruments has limited their widespread adoption. By constructing one's own system the expense is greatly reduced without sacrifice of performance, and the microscope can be more readily tailored to specific applications.


Subject(s)
Calcium Signaling/physiology , Calcium/metabolism , Microscopy, Confocal/instrumentation , Neurons/metabolism , Animals , Cerebral Cortex/cytology , Dendrites/metabolism , Diagnostic Imaging/instrumentation , Diagnostic Imaging/methods , Equipment Design , Lymph Nodes/cytology , Mice , Microscopy, Confocal/methods , Photons , Pollen/cytology , Spine/metabolism
16.
Am J Physiol Gastrointest Liver Physiol ; 281(6): G1477-86, 2001 Dec.
Article in English | MEDLINE | ID: mdl-11705753

ABSTRACT

The major cellular pathway for uptake of the vitamin folic acid, including its absorption in the intestine, is via a plasma membrane carrier system, the reduced folate carrier (RFC). Very little is known about the mechanisms that control intracellular trafficking and plasma membrane targeting of RFC. To begin addressing these issues, we used Xenopus oocyte as a model system and examined whether the signal that targets the protein to the plasma membrane is located in the COOH-terminal cytoplasmic tail or in the backbone of the polypeptide. We also examined the role of microtubules and microfilaments in intracellular trafficking of the protein. Confocal imaging of human RFC (hRFC) fused to the enhanced green fluorescent protein (hRFC-EGFP) showed that the protein was expressed at the plasma membrane, with expression confined almost entirely to the animal pole of the oocyte. Localization of hRFC at the plasma membrane was not affected by partial or total truncation of the COOH-terminal tail of the polypeptide, whereas a construct of the cytoplasmic tail fused to EGFP was not found at the plasma membrane. Disruption of microtubules, but not microfilaments, prevented hRFC expression at the plasma membrane. These results demonstrate that the molecular determinant(s) that directs plasma membrane targeting of hRFC is located within the backbone of the polypeptide and that intact microtubules, but not microfilaments, are essential for intracellular trafficking of the protein.


Subject(s)
Carrier Proteins/genetics , Carrier Proteins/metabolism , Gene Expression , Membrane Transport Proteins , Oocytes/metabolism , Xenopus laevis , Actin Cytoskeleton/physiology , Animals , Cell Membrane/metabolism , Cytochalasin D/pharmacology , Female , Green Fluorescent Proteins , Humans , Leucovorin/metabolism , Luminescent Proteins/genetics , Microinjections , Microtubules/physiology , Recombinant Fusion Proteins , Reduced Folate Carrier Protein , Signal Transduction , Transfection , Tritium
17.
Neurobiol Dis ; 8(3): 469-78, 2001 Jun.
Article in English | MEDLINE | ID: mdl-11442355

ABSTRACT

Mutations in presenilin-1 (PS1), the leading cause of early-onset, autosomal-dominant familial Alzheimer's disease (FAD), enhance calcium signaling mediated by inositol 1,4,5-trisphosphate (IP3). To elucidate the subcellular mechanisms underlying this enhancement, we used high resolution line-scanning confocal microscopy to image elementary calcium release events ("puffs") in Xenopus oocytes expressing wild-type or mutant PS1. Here we report that mutant PS1-rendered puffs more sensitive to IP3 and increased both the magnitude and the rate of calcium release during each event. These effects were not attributable to quantitative changes in the levels of IP3 receptors or their distribution on the ER, but were instead associated with an abnormal elevation of ER calcium stores. Together, our results suggest that the effects of mutant PS1 on calcium signaling are manifested predominantly at the level of the regulation of calcium stores rather than via perturbations in the numbers or activity of IP3-activated calcium release channels.


Subject(s)
Calcium Signaling/physiology , Membrane Proteins/metabolism , Alzheimer Disease/metabolism , Animals , Calcium/metabolism , Calcium Channels/genetics , Calcium Channels/metabolism , Endoplasmic Reticulum/metabolism , Gene Expression/physiology , Inositol 1,4,5-Trisphosphate Receptors , Membrane Proteins/genetics , Microscopy, Confocal , Mutagenesis/physiology , Oocytes/metabolism , Phosphatidylinositols/metabolism , Presenilin-1 , Receptors, Cytoplasmic and Nuclear/genetics , Receptors, Cytoplasmic and Nuclear/metabolism , Xenopus laevis
18.
Nat Biotechnol ; 19(7): 645-9, 2001 Jul.
Article in English | MEDLINE | ID: mdl-11433276

ABSTRACT

DsRed, a recently cloned red fluorescent protein, has attracted great interest as an expression tracer and fusion partner for multicolor imaging. We report that three-photon excitation (lambda <760 nm) rapidly changes the fluorescence of DsRed from red to green when viewed subsequently by conventional (one-photon) epifluorescence. Mechanistically, three-photon excitation (lambda <760 nm) selectively bleaches the mature, red-emitting form of DsRed, thereby enhancing emission from the immature green form through reduction of fluorescence resonance energy transfer (FRET). The "greening" effect occurs in live mammalian cells at the cellular and subcellular levels, and the resultant color change persists for >30 h without affecting cell viability. This technique allows individual cells, organelles, and fusion proteins to be optically marked and has potential utility for studying cell lineage, organelle dynamics, and protein trafficking, as well as for selective retrieval of cells from a population. We describe optimal parameters to induce the color change of DsRed, and demonstrate applications that show the potential of this optical highlighter.


Subject(s)
Fluorescent Dyes/pharmacology , Luminescent Proteins/pharmacology , Microscopy, Fluorescence/methods , Photons , 3T3 Cells , Animals , CHO Cells , Cell Line , Cricetinae , Humans , Mice , Microscopy, Confocal/methods , Plasmids/metabolism , Recombinant Fusion Proteins/metabolism , Time Factors
19.
Br J Pharmacol ; 132(7): 1396-410, 2001 Apr.
Article in English | MEDLINE | ID: mdl-11264232

ABSTRACT

1. The purpose of this study was to compare oocytes from the pipid frogs Xenopus tropicalis and Xenopus laevis, with respect to their utility for studying Ca(2+) signalling mechanisms and for expression of heterologous proteins. 2. We show that X. tropicalis oocytes possess an intracellular Ca(2+) store that is mobilized by inositol (1,4,5) trisphosphate (IP(3)). Ca(2+) signalling is activated by endogenous lysophosphatidic acid receptors and cytosolic Ca(2+) activates a plasma membrane chloride conductance. The spatiotemporal organization of cytosolic Ca(2+) signals, from the microscopic architecture of elementary Ca(2+) 'puffs' to the macroscopic patterns of Ca(2+) spiking are closely similar to the local and global patterns of Ca(2+) release previously characterized in oocytes from X. laevis. 3. By injecting X. tropicalis oocytes with cDNA encoding an ER-targeted fluorescent protein construct, we demonstrate the capacity of the X. tropicalis oocyte to readily express heterologous proteins. The organization of ER is polarized across the oocyte, with the IP(3)-releaseable store targeted within an approximately 8 microm wide band that circumscribes the cell. 4. We conclude that the X. tropicalis oocyte shares many of the characteristics that have made oocytes of X. laevis a favoured system for studying Ca(2+) signalling mechanisms. Moreover, X. tropicalis oocytes display further practical advantages in terms of imaging depth, Ca(2+) signal magnitude and electrical properties. These further enhance the appeal of X. tropicalis as an experimental system, in addition to its greater amenability to transgenic approaches.


Subject(s)
Calcium/metabolism , Oocytes/metabolism , Animals , Biological Transport , Calcium Signaling , Electrophysiology , Endoplasmic Reticulum/metabolism , Female , Genetic Vectors/administration & dosage , Genetic Vectors/genetics , Genetic Vectors/metabolism , Inositol 1,4,5-Trisphosphate/metabolism , Luminescent Proteins/administration & dosage , Luminescent Proteins/genetics , Luminescent Proteins/metabolism , Membrane Potentials/physiology , Microinjections , Microscopy, Confocal , Models, Animal , Xenopus
20.
EMBO J ; 20(1-2): 65-76, 2001 Jan 15.
Article in English | MEDLINE | ID: mdl-11226156

ABSTRACT

Inositol (1,4,5)-trisphosphate (IP(3)) liberates intracellular Ca(2+) both as localized 'puffs' and as repetitive waves that encode information in a frequency-dependent manner. Using video-rate confocal imaging, together with photorelease of IP(3) in Xenopus oocytes, we investigated the roles of puffs in determining the periodicity of global Ca(2+) waves. Wave frequency is not delimited solely by cyclical recovery of the cell's ability to support wave propagation, but further involves sensitization of Ca(2+)-induced Ca(2+) release by progressive increases in puff frequency and amplitude at numerous sites during the interwave period, and accumulation of pacemaker Ca(2+), allowing a puff at a 'focal' site to trigger a subsequent wave. These specific 'focal' sites, distinguished by their higher sensitivity to IP(3) and close apposition to neighboring puff sites, preferentially entrain both the temporal frequency and spatial directionality of Ca(2+) waves. Although summation of activity from many stochastic puff sites promotes the generation of regularly periodic global Ca(2+) signals, the properties of individual Ca(2+) puffs control the kinetics of Ca(2+) spiking and the (higher) frequency of subcellular spikes in their local microdomain.


Subject(s)
Calcium Signaling/physiology , Calcium/metabolism , Oocytes/physiology , Animals , Calcium Signaling/drug effects , Cytoplasmic Granules/physiology , Egtazic Acid/pharmacology , Female , In Vitro Techniques , Kinetics , Microscopy, Confocal , Oocytes/cytology , Oscillometry , Xenopus laevis
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