Structure and evolution of magnetohydrodynamic solitary waves with Hall and finite Larmor radius effects.

Nonlinear and low-frequency solitary waves are investigated in the framework of the one-dimensional Hall-magnetohydrodynamic model with finite Larmor effects and two different closure models for the pressures. For a double adiabatic pressure model, the organization of these localized structures in terms of the propagation angle with respect to the ambient magnetic field θ and the propagation velocity C is discussed. There are three types of regions in the θ-C plane that correspond to domains where either solitary waves cannot exist, are organized in branches, or have a continuous spectrum. A numerical method valid for the two latter cases, which rigorously proves the existence of the waves, is presented and used to locate many waves, including bright and dark structures. Some of them belong to parametric domains where solitary waves were not found in previous works. The stability of the structures has been investigated by performing a linear analysis of the background plasma state and by means of numerical simulations. They show that the cores of some waves can be robust, but, for the parameters considered in the analysis, the tails are unstable. The substitution of the double adiabatic model by evolution equations for the plasma pressures appears to suppress the instability in some cases and to allow the propagation of the solitary waves during long times.

Quasicollapse of oblique solitons of the weakly dissipative derivative nonlinear Schrödinger equation.

Numerical integrations of the derivative nonlinear Schrödinger equation for Alfvén waves, supplemented by a weak dissipative term (originating from diffusion or Landau damping), with initial conditions in the form of a bright soliton with nonvanishing conditions at infinity (oblique soliton), reveal an interesting phenomenon of "quasicollapse": as the dissipation parameter is reduced, larger amplitudes are reached and smaller scales are created, but on an increasing time scale. This process involves an early bifurcation of the initial soliton toward a breather that is analyzed by means of a numerical inverse scattering technique. This evolution leads to the formation of persistent dark solitons that are only weakly affected when crossed by the decaying breather which has the form of either a localized structure or an extended wave packet.

Dynamical model for nonlinear mirror modes near threshold.

Using a reductive perturbative expansion of the Vlasov-Maxwell (VM) equations for magnetized plasmas, a pseudodifferential equation of gradient type is derived for the nonlinear dynamics of mirror modes near the instability threshold. This model, where kinetic effects arise at a linear level only, develops a finite-time singularity, indicating the existence of a subcritical bifurcation. A saturation mechanism based on the local variations of the ion Larmor radius, is then phenomenologically supplemented. In contrast with previous models where saturation is due to the cooling of a population of trapped particles, the resulting equation correctly reproduces results of numerical simulations of VM equations, such as the development of magnetic humps from an initial noise, and the existence of stable large-amplitude magnetic holes both below and slightly above threshold.

Hydrodynamics of bacterial colonies: phase diagrams.

We present numerical simulations of a recent hydrodynamic model describing the growth of bacterial colonies on agar plates. We show that this model is able to qualitatively reproduce experimentally observed phase diagrams, which relate a colony shape to the initial quantity of nutrients on the plate and the initial wetness of the agar. We also discuss the principal features resulting from the interplay between hydrodynamic motions and colony growth, as described by our model.

Hydrodynamics of bacterial colonies: a model.

We propose a hydrodynamic model for the evolution of bacterial colonies growing on soft agar plates. This model consists of reaction-diffusion equations for the concentrations of nutrients, water, and bacteria, coupled to a single hydrodynamic equation for the velocity field of the bacteria-water mixture. It captures the dynamics inside the colony as well as on its boundary and allows us to identify a mechanism for collective motion towards fresh nutrients, which, in its modeling aspects, is similar to classical chemotaxis. As shown in numerical simulations, our model reproduces both usual colony shapes and typical hydrodynamic motions, such as the whirls and jets recently observed in wet colonies of Bacillus subtilis. The approach presented here could be extended to different experimental situations and provides a general framework for the use of advection-reaction-diffusion equations in modeling bacterial colonies.

Phase dynamics of nearly stationary patterns in activator-inhibitor systems

The slow dynamics of nearly stationary patterns in a FitzHugh-Nagumo model are studied using a phase dynamics approach. A Cross-Newell phase equation describing slow and weak modulations of periodic stationary solutions is derived. The derivation applies to the bistable, excitable, and Turing unstable regimes. In the bistable case stability thresholds are obtained for the Eckhaus and zigzag instabilities and for the transition to traveling waves. Neutral stability curves demonstrate the destabilization of stationary planar patterns at low wave numbers to zigzag and traveling modes. Numerical solutions of the model system support the theoretical findings.

Effect of a random noise on scaling laws of finite Prandtl number rotating convection near threshold.

A generalized Swift-Hohenberg model including a weak random forcing, viewed as mimicking the intrinsic source of noise due to boundary defects, is used to reproduce the experimentally observed power-law variation of the correlation length of rotating convection patterns as a function of the stress parameter near threshold, and to demonstrate the sensitivity of the exponent to the amplitude of the superimposed random noise. The scaling properties of rotating convection near threshold are thus conjectured to be nonuniversal.