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1.
Dalton Trans ; 47(6): 1827-1840, 2018 Feb 06.
Article in English | MEDLINE | ID: mdl-29302661

ABSTRACT

A valence isoelectronic and isostructural series of charged bis(N-heterocyclic carbene) pincer complexes [M(bC^N^bC)X]OTf and [M(bC^N^bC)CH3CN](OTf)2 (where M = Ni, Pd, and Pt, bC^N^bC = 1,1'-(pyridine-2,6-diylbis(methylene))bis(3-butylbenzo[d]imidazol-2-ylidene)) were synthesized, characterized, modelled by density functional theory calculations, and compared for their electrochemical properties and reactivity with CO2. Although the electrochemical response of each complex is altered by the presence of CO2, controlled potential electrolysis experiments demonstrated the superior ability of [Pd] to reduce CO2 to CO in faradaic efficiencies up to 58% in the presence of trifluoroacetic acid, compared to [Pt] and [Ni] which showed only marginal production of CO, giving the trend [Pd] ≫ [Pt] > [Ni] for this series.

2.
Metallomics ; 9(7): 902-909, 2017 07 19.
Article in English | MEDLINE | ID: mdl-28561856

ABSTRACT

Trivalent lanthanum (La3+) has the potential to treat bone resorption disorders (such as osteoporosis) by eliciting a bone-building response in the cells which control skeletal remodelling. Because La3+ suffers from extremely poor intestinal absorption, specifically designed chelators are required in order that a biologically active form of lanthanum can be administered orally. Two such chelators, 1,2-dimethyl-3-hydroxy-4-pyridinone (Hdpp) and bis-{[bis(carboxymethyl)amino]methy}phosphinic acid (H5XT), have previously been the subjects of extensive physical, in vitro, and in vivo testing as the tris- and mono-lanthanum(iii) complexes La(dpp)3 and La(XT), respectively. In this manuscript, we expand upon those studies to include 4-week intravenous (IV) and oral La3+ biodistribution profiles, which show that the metal ion initially accumulates in the liver followed by preferential redistribution and retention by bone. Of the two compounds, La(XT) demonstrates the more favourable in vivo characteristics, therefore dose-dependent oral biodistribution studies were carried out with this complex. These show drug saturation above a dose of 100 mg kg-1 day-1, so liver histology was performed in order to assess any potential toxicity. Finally, we improve upon the physical characterization of La(dpp)3 to include a single crystal X-ray structure, which exhibits an 8-coorindate La3+ centre with two bound water molecules, and a disordered exoclathrate-type hydrogen bonded network.


Subject(s)
Bone Resorption/drug therapy , Lanthanum/administration & dosage , Lanthanum/therapeutic use , Administration, Intravenous , Administration, Oral , Animals , Bone Resorption/blood , Bone Resorption/pathology , Creatinine/blood , Crystallography, X-Ray , Dose-Response Relationship, Drug , Lanthanum/chemistry , Liver/enzymology , Molecular Conformation , Rats , Tissue Distribution
3.
PLoS Negl Trop Dis ; 11(6): e0005628, 2017 Jun.
Article in English | MEDLINE | ID: mdl-28614360

ABSTRACT

The vast burden of cryptococcal meningitis occurs in immunosuppressed patients, driven by HIV, and is caused by Cryptococcus neoformans var. grubii. We previously reported cryptococcal meningitis in Vietnam arising atypically in HIV uninfected, apparently immunocompetent patients, caused by a single amplified fragment length polymorphism (AFLP) cluster of C. neoformans var. grubii (VNIγ). This variant was less common in HIV infected individuals; it remains unclear why this lineage is associated with apparently immunocompetent patients. To study this host tropism we aimed to further our understanding of clinical phenotype and genomic variation within Vietnamese C. neoformans var. grubii. After performing MLST on C. neoformans clinical isolates we identified 14 sequence types (STs); ST5 correlated with the VNIγ cluster. We next compared clinical phenotype by lineage and found HIV infected patients with cryptococcal meningitis caused by ST5 organisms were significantly more likely to have lymphadenopathy (11% vs. 4%, p = 0.05 Fisher's exact test) and higher blood lymphocyte count (median 0.76 versus 0.55 X109 cells/L, p = 0.001, Kruskal-Wallis test). Furthermore, survivors of ST5 infections had evidence of worse disability outcomes at 70 days (72.7% (40/55) in ST5 infections versus 57.1% (52/91) non-ST5 infections (OR 2.11, 95%CI 1.01 to 4.41), p = 0.046). To further investigate the relationship between strain and disease phenotype we performed genome sequencing on eight Vietnamese C. neoformans var. grubii. Eight genome assemblies exhibited >99% nucleotide sequence identity and we identified 165 kbp of lineage specific to Vietnamese isolates. ST5 genomes harbored several strain specific regions, incorporating 19 annotated coding sequences and eight hypothetical proteins. These regions included a phenolic acid decarboxylase, a DEAD-box ATP-dependent RNA helicase 26, oxoprolinases, a taurine catabolism dioxygenase, a zinc finger protein, membrane transport proteins and various drug transporters. Our work outlines the complexity of genomic pathogenicity in cryptococcal infections and identifies a number of gene candidates that may aid the disaggregation of the pathways associated with the pathogenesis of Cryptococcus neoformans var. grubii.


Subject(s)
Cryptococcus neoformans/classification , Cryptococcus neoformans/genetics , Genetic Variation , Genome, Fungal , HIV Infections/complications , Meningitis, Cryptococcal/microbiology , Cryptococcus neoformans/isolation & purification , Cryptococcus neoformans/physiology , Genomics , Host Specificity , Humans , Meningitis, Cryptococcal/pathology , Multilocus Sequence Typing , Mycological Typing Techniques , Vietnam
4.
Dalton Trans ; 45(13): 5583-9, 2016 Apr 07.
Article in English | MEDLINE | ID: mdl-26916542

ABSTRACT

Tridentate amine-imine-phosphine ligands, R2PC5H7NC2H4NEt2 [(R)PNN(H)], where R = Pr(i) or Bu(t) are synthesized using a straightforward protocol of condensation, deprotonation, and addition of a chlorodialkylphosphine. Multinuclear NMR spectroscopy shows the ligands exist exclusively in the enamine tautomeric form in solution. Treating these ligands with RuHCl(PPr(i)3)2(CO) forms the desired coordination compounds, RuHCl[(R)PNN(H)](CO), where the imine tautomeric form of the ligands coordinates to ruthenium. Deuterium labelling experiments show Ru-H/N-D scrambling occurs during ligand coordination. Treating the RuHCl[(R)PNN(H)](CO) precursors with potassium tert-butoxide allows for the synthesis of two new ruthenium enamido-phosphine complexes, RuH[(R)PNN](CO), which were fully characterized. The structure of one of the derivatives was confirmed by X-ray crystallography (R = Pr(i)). The reactivity of the enamido-phosphine complexes with H2 and benzyl alcohol is also reported. For the enamido phosphine complex where R = Pr(i), the reaction with H2 is reversible and forms (RuH(CO)[(Pri)PNN(H)])2(µ-H)2, a hydride-bridged dimer that results from cooperative activation of H2. The reactivity of both amine-enamido-phosphine ruthenium compounds with benzyl alcohol establishes that the complexes are catalyst precursors for acceptorless dehydrogenation (AD), although the turnover frequencies measured using both catalyst precursors are modest.

5.
mBio ; 5(1): e00926-13, 2014 Feb 11.
Article in English | MEDLINE | ID: mdl-24520057

ABSTRACT

UNLABELLED: Burkholderia pseudomallei is the causative agent of melioidosis, an often fatal infectious disease for which there is no vaccine. B. pseudomallei is listed as a tier 1 select agent, and as current therapeutic options are limited due to its natural resistance to most antibiotics, the development of new antimicrobial therapies is imperative. To identify drug targets and better understand the complex B. pseudomallei genome, we sought a genome-wide approach to identify lethal gene targets. As B. pseudomallei has an unusually large genome spread over two chromosomes, an extensive screen was required to achieve a comprehensive analysis. Here we describe transposon-directed insertion site sequencing (TraDIS) of a library of over 10(6) transposon insertion mutants, which provides the level of genome saturation required to identify essential genes. Using this technique, we have identified a set of 505 genes that are predicted to be essential in B. pseudomallei K96243. To validate our screen, three genes predicted to be essential, pyrH, accA, and sodB, and a gene predicted to be nonessential, bpss0370, were independently investigated through the generation of conditional mutants. The conditional mutants confirmed the TraDIS predictions, showing that we have generated a list of genes predicted to be essential and demonstrating that this technique can be used to analyze complex genomes and thus be more widely applied. IMPORTANCE: Burkholderia pseudomallei is a lethal human pathogen that is considered a potential bioterrorism threat and has limited treatment options due to an unusually high natural resistance to most antibiotics. We have identified a set of genes that are required for bacterial growth and thus are excellent candidates against which to develop potential novel antibiotics. To validate our approach, we constructed four mutants in which gene expression can be turned on and off conditionally to confirm that these genes are required for the bacteria to survive.


Subject(s)
Burkholderia pseudomallei/genetics , Genes, Bacterial , Genes, Essential , Genome, Bacterial , Mutagenesis, Insertional , DNA Transposable Elements , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , Sequence Analysis, DNA
6.
Genome Biol ; 13(12): R115, 2012 Dec 13.
Article in English | MEDLINE | ID: mdl-23237666

ABSTRACT

BACKGROUND: Gastric cancer is the second highest cause of global cancer mortality. To explore the complete repertoire of somatic alterations in gastric cancer, we combined massively parallel short read and DNA paired-end tag sequencing to present the first whole-genome analysis of two gastric adenocarcinomas, one with chromosomal instability and the other with microsatellite instability. RESULTS: Integrative analysis and de novo assemblies revealed the architecture of a wild-type KRAS amplification, a common driver event in gastric cancer. We discovered three distinct mutational signatures in gastric cancer--against a genome-wide backdrop of oxidative and microsatellite instability-related mutational signatures, we identified the first exome-specific mutational signature. Further characterization of the impact of these signatures by combining sequencing data from 40 complete gastric cancer exomes and targeted screening of an additional 94 independent gastric tumors uncovered ACVR2A, RPL22 and LMAN1 as recurrently mutated genes in microsatellite instability-positive gastric cancer and PAPPA as a recurrently mutated gene in TP53 wild-type gastric cancer. CONCLUSIONS: These results highlight how whole-genome cancer sequencing can uncover information relevant to tissue-specific carcinogenesis that would otherwise be missed from exome-sequencing data.


Subject(s)
DNA Mutational Analysis/methods , High-Throughput Nucleotide Sequencing/methods , Stomach Neoplasms/genetics , Adenocarcinoma/genetics , Chromosomal Instability , Deamination , Exome , Genomics , Microsatellite Instability , Mutation , Reactive Oxygen Species/metabolism
7.
Genome Res ; 21(5): 665-75, 2011 May.
Article in English | MEDLINE | ID: mdl-21467267

ABSTRACT

Somatic genome rearrangements are thought to play important roles in cancer development. We optimized a long-span paired-end-tag (PET) sequencing approach using 10-Kb genomic DNA inserts to study human genome structural variations (SVs). The use of a 10-Kb insert size allows the identification of breakpoints within repetitive or homology-containing regions of a few kilobases in size and results in a higher physical coverage compared with small insert libraries with the same sequencing effort. We have applied this approach to comprehensively characterize the SVs of 15 cancer and two noncancer genomes and used a filtering approach to strongly enrich for somatic SVs in the cancer genomes. Our analyses revealed that most inversions, deletions, and insertions are germ-line SVs, whereas tandem duplications, unpaired inversions, interchromosomal translocations, and complex rearrangements are over-represented among somatic rearrangements in cancer genomes. We demonstrate that the quantitative and connective nature of DNA-PET data is precise in delineating the genealogy of complex rearrangement events, we observe signatures that are compatible with breakage-fusion-bridge cycles, and we discover that large duplications are among the initial rearrangements that trigger genome instability for extensive amplification in epithelial cancers.


Subject(s)
Base Pairing/genetics , Breast Neoplasms/genetics , Chromosome Mapping/methods , Genome, Human/genetics , Genomic Structural Variation/genetics , Stomach Neoplasms/genetics , Cell Line, Tumor , Computational Biology , DNA/genetics , Female , Gene Rearrangement , Humans , Sequence Analysis, DNA
8.
Acta Crystallogr Sect E Struct Rep Online ; 65(Pt 11): o2621, 2009 Oct 03.
Article in English | MEDLINE | ID: mdl-21578237

ABSTRACT

In the title compound, C(13)H(15)NO(3)S, the sole classical hydrogen-bond donor is involved in an intra-molecular O-H⋯N hydrogen bond. In the crystal structure, pairs of mol-ecules related by inversion centres are linked by pairs of weak inter-molecular C-H⋯O inter-actions; these centrosymmetric pairs are, in turn, linked further by weak inter-molecular C-H⋯O inter-actions, forming two-dimensional sheets oriented parallel to (101).

9.
Inorg Chem ; 40(23): 6026-34, 2001 Nov 05.
Article in English | MEDLINE | ID: mdl-11681921

ABSTRACT

A series of coordination polymers containing Cu(II) and [Au(CN)(2)](-) units has been prepared. Most of their structures incorporate attractive gold-gold interactions, thus illustrating that such "aurophilic" interactions can be powerful tools for increasing structural dimensionality in supramolecular systems. [Cu(tren)Au(CN)(2)][Au(CN)(2)] (1, tren = tris(2-ethylamino)amine) forms a cation/anion pair, which is weakly linked by hydrogen bonds but not by aurophilic interactions. [Cu(en)(2)Au(CN)(2)][Au(CN)(2)] (2-Au, en = ethylenediamine) is a 2-D system composed of a chain of [Au(CN)(2)](-) anions and another chain of [(en)(2)Cu-NCAuCN](+) cations; short Au-Au bonds of 3.1405(2) A connect the anions. This bond is shorter than that observed in the analogous silver(I) structure, 2-Ag. The average M-C bond lengths of 1.984(8) A in 2-Au are significantly shorter than those found in 2-Ag, suggesting that Au(I) is smaller than Ag(I). Cu(dien)[Au(CN)(2)](2) (3, dien = diethylenetriamine) forms a 1-D chain of tetranuclear [Au(CN)(2)](-) units that are bound to [Cu(dien)] centers. Aurophilic interactions of ca. 3.35 A hold the tetramer together. Cu(tmeda)[Au(CN)(2)](2) (4, tmeda = N,N,N',N'-tetramethylethylenediamine) forms a 3-D network by virtue of aurophilic interactions of 3.3450(10) and 3.5378(8) A. Altering the Cu:Au stoichiometry yields Cu(tmeda)[Au(CN)(2)](1.5)(ClO(4))(0.5) (5), which has an unusual 2-D rhombohedral layer structure (space group R32). Complex 5 is composed of three mutually interpenetrating Cu[Au(CN)(2)](1.5) networks which are interconnected by aurophilic interactions of 3.4018(7) and 3.5949(8) A. Weak antiferromagnetic coupling is observed in 2 and 5.

10.
J Am Chem Soc ; 123(41): 9963-73, 2001 Oct 17.
Article in English | MEDLINE | ID: mdl-11592875

ABSTRACT

A series of Pd complexes of 3'-diphenylphosphino-2,2':5'2' '-terthiophene (1a, dppterth) in which the metal is coordinated in three different modes have been prepared and electropolymerized, resulting in the formation of conductive thin films. In [Pd2(mu-Cl2)(dppterth-P,C3)2] (3a) the metal is P,C-coordinated, in [PdCl2(dppterth-P)2] (4a) the coordination is monodentate via the phosphine, and in [Pd(dppterth-P,C3)(dppterth-P,S1)][PF6] (5a) both P,C- and P,S-coordination modes are found. In 5a, the coordinated thiophene is hemilabile and may be displaced by reaction with more strongly coordinating ligands such as isocyanides. To probe the effect of blocking the alpha-position of the terthienyl moiety with methyl groups, 3'-diphenylphosphino-5-methyl-2,2':5'2' '-terthiophene (1b, Me-dppterth) and 3'-diphenylphosphino-5,5' '-dimethyl-2,2':5'2' '-terthiophene (1c, Me2-dppterth) were prepared, and the corresponding series of Pd complexes was synthesized. One of these complexes, [Pd(Me2-dppterth-P,C3)(Me2-dppterth-P,S1)][PF6] (5c), has been crystallographically characterized. The electropolymerized films prepared from 5a react with isonitriles, and shifts in the absorption spectra of the electropolymerized materials are observed upon reaction. A Pd complex has also been prepared from 5-diphenylphosphino-2,2':5'2' '-terthiophene (2, 5dppterth), and this complex has been electropolymerized. All the electropolymerized thin films have been characterized using EDX analysis, which demonstrates good correspondence with the elemental analysis of the respective monomers, and the maximum conductivities of the films are near 10(-4) S x cm(-1). Comparing the electropolymerization behavior of the complexes, along with their electrochemical and spectroscopic data, allows conclusions to be drawn regarding the involvement of pi-delocalization and the metal group in the conductivity of the materials.

12.
J Am Chem Soc ; 123(17): 3960-73, 2001 May 02.
Article in English | MEDLINE | ID: mdl-11457146

ABSTRACT

The reaction of a mixture of 1 equiv of PhPH(2) and 2 equiv of PhNHSiMe(2)CH(2)Cl with 4 equiv of Bu(n)Li followed by the addition of THF generates the lithiated ligand precursor [NPN]Li(2).(THF)(2) (where [NPN] = PhP(CH(2)SiMe(2)NPh)(2)). The reaction of [NPN]Li(2).(THF)(2) with TaMe(3)Cl(2) produces [NPN]TaMe(3), which reacts under H(2) to yield the diamagnetic dinuclear Ta(IV) tetrahydride ([NPN]Ta)(2)(mu-H)(4). This hydride reacts with N(2) with the loss of H(2) to produce ([NPN]Ta(mu-H))(2)(mu-eta(1):eta(2)-N(2)), which was characterized both in solution and in the solid state, and contains strongly activated N(2) bound in the unprecedented side-on end-on dinuclear bonding mode. A density functional theory calculation on the model complex [(H(3)P)(H(2)N)(2)Ta(mu-H)](2)(mu-eta(1):eta(2)-N(2)) provides insight into the molecular orbital interactions involved in the side-on end-on bonding mode of dinitrogen. The reaction of ([NPN]Ta(mu-H))(2)(mu-eta(1):eta(2)-N(2)) with propene generates the end-on bound dinitrogen complex ([NPN]Ta(CH(2)CH(2)CH(3)))(2)(mu-eta(1):eta(1)-N(2)), and the reaction of [NPN]Li(2).(THF)(2) with NbCl(3)(DME) generates the end-on bound dinitrogen complex ([NPN]NbCl)(2)(mu-eta(1):eta(1)-N(2)). These two end-on bound dinitrogen complexes provide evidence that the bridging hydride ligands are responsible for the unusual bonding mode of dinitrogen in ([NPN]Ta(mu-H))(2)(mu-eta(1):eta(2)-N(2)). The dinitrogen moiety in the side-on end-on mode is amenable to functionalization; the reaction of ([NPN]Ta(mu-H))(2)(mu-eta(1):eta(2)-N(2)) with PhCH(2)Br results in C-N bond formation to yield [NPN]Ta(mu-eta(1):eta(2)-N(2)CH(2)Ph)(mu-H)(2)TaBr[NPN]. Nitrogen-15 NMR spectral data are provided for all the tantalum-dinitrogen complexes and derivatives described.

13.
Acta Crystallogr B ; 57(Pt 4): 507-16, 2001 Aug.
Article in English | MEDLINE | ID: mdl-11468377

ABSTRACT

Structures of two derivatives of the curved fluoradene ring system (C(19)H(12)) have been determined. Both have phases that are highly pseudosymmetric. At room temperature crystals of 7b-triisopropylsilylfluoradene (C(28)H(32)Si) have a P1 cell that contains two independent molecules (Z' = 2) and that is almost centered. Crystals of 7b-(2,4-dinitrophenyl)fluoradene (C(25)H(14)N(2)O(4)) have both a P2(1)/c cell with Z' = 1 and a P2(1)/c cell with Z' = 2. The molecular volumes in these two P2(1)/c structures differ by 0.7%, but the structures are otherwise virtually the same; the two independent molecules in the larger cell are related by a pseudotranslation. Some of the atomic ellipsoids in the P2(1)/c, Z' = 1 structure are very large and eccentric, and there are some hints in the diffraction pattern of an incipient phase transition, but the Z' = 1 and Z' = 2 phases are clearly different. The P2(1)/c, Z' = 2 crystal at 295 K probably contains some volume fraction of the Z' = 1 phase; when the temperature is lowered to 273 K this fraction is decreased markedly. The pronounced pseudosymmetry in the P1 and P2(1)/c structures that have Z' = 2 has been investigated by analysing the atomic coordinates, by performing refinements in the smaller pseudocells and by making separate Wilson plots for the classes of reflections which are systematically strong and systematically weak. All three approaches are informative, but they reveal different information. Least-squares fits of coordinates of corresponding atoms measure the similarity of the molecular conformations. The Wilson plots allow a quantitative comparison of the intensities of the strong and weak reflections and thus an assessment of the deviations of the true structure from the smaller pseudocell structure. Comparison of the atomic displacements obtained in the full and pseudocell refinements shows where the structural distortions are largest and provides an indication of their directions.

14.
Org Lett ; 3(13): 2109-12, 2001 Jun 28.
Article in English | MEDLINE | ID: mdl-11418061

ABSTRACT

[reaction: see text] Semipinacol-type rearrangements to produce azaspirocyclic ketones are presented. The yields and stereoselectivities of these reactions range from 67-94% yield and 2.8:1 to 1:0 diastereoselectivity, respectively.

15.
Chemistry ; 7(8): 1637-45, 2001 Apr 17.
Article in English | MEDLINE | ID: mdl-11349904

ABSTRACT

The preparation of cavitands composed of 4, 5, 6, and 7 aromatic subunits ([n]cavitands, n=4-7) is described. The simple, two-step synthetic procedure utilized readily available starting materials (2-methylresorcinol and diethoxymethane). The two cavitand products having 4 and 5 aromatic subunits exhibited highly symmetric cone conformations, while the larger cavitands (n = 6 and 7) adopt conformations of lower symmetry. 1H NMR spectroscopic studies of [6]cavitand and [7]cavitand revealed that these hosts undergo exchange between equivalent conformations at room temperature. The departure of these two cavitands from cone conformations is related to steric crowding on their Ar-O-CH2-OAr bridges and is predicted by simple molecular mechanics calculations (MM2 force field). X-ray diffraction studies on single crystals of the [4]cavitand, [5]cavitand, and [6]cavitand hosts afforded additional experimental support for these conclusions.


Subject(s)
Ethers, Cyclic/chemical synthesis , Resorcinols/chemical synthesis , Ethers, Cyclic/chemistry , Models, Chemical , Models, Molecular , Molecular Conformation , Molecular Structure , Resorcinols/chemistry
16.
Inorg Chem ; 40(9): 2005-10, 2001 Apr 23.
Article in English | MEDLINE | ID: mdl-11304142

ABSTRACT

A number of Re complexes with N,N'-bis(2-pyridylmethyl)ethylenediamine (H2pmen) have been made from [NH4][ReO4]. [ReOCl2(H2pmen)]Cl, [ReOCl(Hpmen)][ReO4], and [ReO2(H2pmen)][ReO4] are related by hydrolysis/HCl substitution. [ReOCl(Hpmen)][ReO4] was structurally characterized and found to contain a water-stable amido-Re bond. Dehydrogenation of the N-donor ligand from each amine to imine with concomitant two-electron reduction of the Re center occurs readily in these systems. With suitable 3-hydroxy-4-pyrones, ternary complexes such as [ReIIICl(ma)(C14H14N4)][ReO4].CH3OH, 5, were made from [NH4][ReO4], H2pmen.4HCl and pyrones in one-pot syntheses. 5, a seven-coordinate ReIII complex, was structurally characterized.


Subject(s)
Ethylenediamines/chemistry , Organometallic Compounds/chemistry , Radiopharmaceuticals/chemistry , Rhenium/chemistry , Crystallography, X-Ray , Hydrogenation , Hydrolysis , Magnetic Resonance Spectroscopy , Molecular Structure , Radioisotopes
17.
Carbohydr Res ; 330(3): 421-6, 2001 Feb 15.
Article in English | MEDLINE | ID: mdl-11270822

ABSTRACT

The conformational preferences about the C-N bond in N-(4-methoxyphenyl)-2,3,4,6-tetra-O-acetyl-alpha (1) and beta-D-glucopyranosylamine (2), in the solid state and in solution, have been investigated. The crystal structure of the axially substituted alpha anomer (1) indicates a conformational preference about the C-1-N bond in which nN-->sigma*C-O exo-anomeric interactions may be expressed, although this conformational preference is not displayed in solution. The solution conformation relieves steric interactions that result from expression of the exo-anomeric effect in the solid-state conformation. The conformational preference in the equatorially substituted beta anomer (2) both in solution and in the solid state is similar and permits expression of nN-->sigma*C-O exo-anomeric interactions. The structural data for 1 and 2 indicate significant differences in O-5-C-1-N-1 bond angles but insignificant differences in each of the O-5-C-1 or C-1-N-1 bond lengths. The J(C-1-H-1 coupling constants in 1 and 2 indicate a greater coupling constant for the alpha anomer that is consistent with a dominant nO-->sigma*C-H orbital interaction in the beta anomer that weakens the C-1-H-1 bond.


Subject(s)
Glucosamine/analogs & derivatives , Glucosamine/chemistry , Acetylation , Carbohydrate Conformation , Crystallography, X-Ray , Models, Molecular , Solutions , Stereoisomerism
18.
Chem Commun (Camb) ; (17): 1570-1, 2001 Sep 07.
Article in English | MEDLINE | ID: mdl-12240386

ABSTRACT

Several cis-RuX2((R)-BINAP)(diimine) complexes have been prepared, and many of these exhibit an unusual temperature-dependent, accidental degeneracy of the 31P shifts in their solution NMR spectra.

19.
Inorg Chem ; 39(26): 5958-63, 2000 Dec 25.
Article in English | MEDLINE | ID: mdl-11188520

ABSTRACT

The oxorhenium(V) complexes with ligands containing N4 (H2pmen) and N4O2 (H2bbpen, H2Clbbpen, and H2bped) donor atom sets have been synthesized. X-ray crystallographic analyses of the [ReO(H2pmen)Cl2]+, [ReO(bbpen)]+, and [ReO(bped)]+ complexes showed that all three cations share a rare seven-coordinate structure with a distorted pentagonal bipyramidal geometry, which represents a novel and potentially general structural motif in ReV = O complexes. 1H NMR spectroscopy shows that the structures of the complexes are retained in the solution.


Subject(s)
Organometallic Compounds/chemistry , Rhenium , Crystallography, X-Ray , Models, Molecular , Molecular Conformation , Molecular Structure , Organometallic Compounds/chemical synthesis , Radioisotopes , Radiopharmaceuticals , Structure-Activity Relationship
20.
Inorg Chem ; 39(3): 508-16, 2000 Feb 07.
Article in English | MEDLINE | ID: mdl-11229570

ABSTRACT

This report covers initial studies in the coaggregation of nickel (Ni2+) and lanthanide (Ln3+) metal ions to form complexes with interesting structural and magnetic properties. The tripodal amine phenol ligand H3tam (1,1,1-tris(((2-hydroxybenzyl)amino)methyl)ethane) is shown to be particularly accommodating with respect to the geometric constraints of both transition and lanthanide metal ions, forming isolable complexes with both of these ion types. In the solid-state structure of [Ni(H2tam)(CH3CN)]PF6.2.5CH3CN.0.5CH3OH (1), the Ni(II) center has a distorted octahedral geometry, with an N3O2 donor set from the [H2tam]- ligand and a coordinated solvent (acetonitrile) occupying the sixth site. The reaction of stoichiometric amounts of H3tam with the Ni(II) ion in the presence of lanthanide(III) ions provides [LnNi2(tam)2]+ cationic complexes which contain coaggregated metal ions. These complexes are isolable and have been characterized by a variety of analytical techniques, with mass spectrometry proving to be particularly diagnostic. The solid-state structures of [LaNi2(tam)2(CH3OH)1/2(CH3CH2OH)1/2(H2O)]ClO4.0.5CH3OH.0.5CH3CH2OH.4H2O (2), [DyNi2(tam)2(CH3OH)(H2O)]ClO4.CH3OH. H2O(6), and [YbNi2(tam)2(H2O)]ClO4.2.58H2O(9) have been determined. Each complex contains two octahedral Ni(II) ions, each of which is encapsulated by the ligand tam3- in an N3O3 coordination sphere; each [Ni(tam)]-unit caps the lanthanide(III) ion via bridging phenoxy oxygen donor atoms. In 2, La3+ is eight-coordinated, while in 6, Dy(III) is seven- (to "weakly eight-") coordinated, and Yb(III) in 9 has a six-coordination environment. The complexes are symmetrically different, 2 possessing C2 symmetry and 6 and 9 having C1 symmetry. Magnetic studies of 2, 6, and 9 indicate that antiferromagnetic exchange coupling between the Ni(II) and Ln(III) ions increases with decreasing ionic radius of Ln(III).


Subject(s)
Metals, Rare Earth/chemistry , Nickel/chemistry , Amines/chemistry , Contrast Media/chemistry , Ligands , Magnetics , Models, Molecular , Molecular Structure , Organometallic Compounds/chemical synthesis , Organometallic Compounds/chemistry , Phenols/chemistry
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