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CanDIG: Federated network across Canada for multi-omic and health data discovery and analysis.
Dursi, L Jonathan; Bozoky, Zoltan; de Borja, Richard; Li, Haoyuan; Bujold, David; Lipski, Adam; Rashid, Shaikh Farhan; Sethi, Amanjeev; Memon, Neelam; Naidoo, Dashaylan; Coral-Sasso, Felipe; Wong, Matthew; Quirion, P-O; Lu, Zhibin; Agarwal, Samarth; Pavlov, Yuriy; Ponomarev, Andrew; Husic, Mia; Pace, Krista; Palmer, Samantha; Grover, Stephanie A; Hakgor, Sevan; Siu, Lillian L; Malkin, David; Virtanen, Carl; Pugh, Trevor J; Jacques, Pierre-Étienne; Joly, Yann; Jones, Steven J M; Bourque, Guillaume; Brudno, Michael.
Cell Genom ; 1(2): 100033, 2021 Nov 10.
Article in English | MEDLINE | ID: mdl-36778585

ABSTRACT

We present the Canadian Distributed Infrastructure for Genomics (CanDIG) platform, which enables federated querying and analysis of human genomics and linked biomedical data. CanDIG leverages the standards and frameworks of the Global Alliance for Genomics and Health (GA4GH) and currently hosts data for five pan-Canadian projects. We describe CanDIG's key design decisions and features as a guide for other federated data systems.

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