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1.
Am J Infect Control ; 44(1): e1-3, 2016 Jan 01.
Article in English | MEDLINE | ID: mdl-26416525

ABSTRACT

We found a 6.1% bacterial contamination rate among 198 propofol vials collected after clinical use in 12 operating rooms of a high-complexity hospital in Cali, Colombia. Some propofol vials were used for extended periods (up to 72 hours), and only 26.1% of vials were punctured once. Median time of use, although not statistically significant, was higher in positive samples (7.2 vs 3.5 hours, P = .08). Education on the topic should stress that vials are single-patient use and must be immediately discarded after use.


Subject(s)
Anesthetics, Intravenous/therapeutic use , Bacteria/growth & development , Drug Contamination/statistics & numerical data , Propofol/therapeutic use , Colombia , Hospitals/standards , Humans , Operating Rooms/standards , Syringes
2.
Water Res ; 46(19): 6410-8, 2012 Dec 01.
Article in English | MEDLINE | ID: mdl-23039916

ABSTRACT

Water contaminated with human faeces is a risk to human health and management of water bodies can be improved by determining the sources of faecal pollution. Field studies show that existing methods are insufficient and that different markers are required. This study proposes the combined use of two microbial indicators, the concentrations of which are presented as ratios. This provides a more reliable approach to identifying faecal sources as it avoids variation due to treatment or ageing of the contamination. Among other indicators, bacteriophages have been proposed as rapid and cheap indicators of faecal pollution. Samples analysed in this study were derived from wastewater treatment plants (raw sewage, secondary and tertiary effluents and raw sewage sludge) river water, seawater and animal related wastewater. The abundance ratios of faecal coliforms and Bacteroides phages, either strain RYC2056 (non-specific for faecal origin) or strain GA17 (specific for human pollution), and among somatic coliphages and phages infecting both Bacteroides strains, were evaluated. The results indicate that the ratio of somatic coliphages and phages infecting Bacteroides strain GA17, which is specific to human faecal sources, provides a robust method for discriminating samples, even those presenting different levels and ages of pollution, and allows samples polluted with human faeces to be distinguished from those containing animal faecal pollution. This method allows the generation of numerical data that can be further applied to numerical methods for faecal pollution discrimination.


Subject(s)
Bacteriophages/isolation & purification , Bacteroides/virology , Coliphages/isolation & purification , Feces/microbiology , Water Pollution/analysis , Animals , Environmental Monitoring/methods , Humans , Rivers/microbiology , Sewage , Spain , Wastewater/microbiology , Water Microbiology
3.
Environ Microbiol ; 13(6): 1622-31, 2011 Jun.
Article in English | MEDLINE | ID: mdl-21443742

ABSTRACT

Microbial source tracking (MST) methods allow the identification of specific faecal sources. The aim is to detect the sources of faecal pollution in a water body to allow targeted, efficient and cost-effective remediation efforts in the catchment. Bacteriophages infecting selected host strains of Bacteroides species are used as markers to track faecal contaminants in water. By using a suitable Bacteroides host from a given faecal origin, it is possible to specifically detect bacteriophages of this faecal origin. It can thus be used to detect specific phages of Bacteroides for MST. With this objective, we isolated several Bacteroides strains from pig, cow and poultry faeces by applying a previously optimized methodology used to isolate the host strains from humans. The isolated strains belonged to Bacteroides fragilis and Bacteroides thetaiotaomicron. These strains, like most Bacteroides species, detected phages of the Siphoviridae morphology. Using the newly isolated host strains for phage enumeration in a range of samples, we showed that these detect phages in faecal sources that coincide with their own origin (70-100% of the samples), and show no detection or very low percentages of detection of phages from other animal origins (from 0 to 20% of the samples). Only strains isolated from pig wastewater detected phages in 50% of human sewage samples. Nevertheless, those strains detecting phages from faecal origins other than their own detected fewer phages (2-3 log10 pfu·100 ml⁻¹) than the phages detected by the specific strain of the same origin. On the basis of our results, we propose that faecal source tracking with phages infecting specific Bacteroides host strains is a useful method for MST. In addition, the method presented here is feasible in laboratories equipped with only basic microbiological equipment, it is more rapid and cost-effective than other procedures and it does not require highly qualified staff.


Subject(s)
Bacteriophages/growth & development , Bacteroides/virology , Environmental Monitoring/methods , Feces/virology , Sewage/analysis , Water Pollutants/analysis , Water Pollution/statistics & numerical data , Animals , Bacteriophages/isolation & purification , Bacteroides/classification , Bacteroides/genetics , Cattle , Feces/microbiology , Fresh Water/microbiology , Fresh Water/virology , Poultry , Sewage/microbiology , Sewage/virology , Swine , Water Microbiology , Water Pollution/analysis , Water Supply/analysis , Water Supply/statistics & numerical data
4.
Water Res ; 43(6): 1559-64, 2009 Apr.
Article in English | MEDLINE | ID: mdl-19147174

ABSTRACT

The four subgroups of F-specific RNA bacteriophages (I-IV) have been proposed as potential tracers for faecal source tracking. Groups II and III predominate in human sources while groups I and IV are most abundant in animal sources. The four subgroups of naturally occurring F-specific RNA bacteriophages were identified in different samples by plaque hybridization with genotype-specific probes and the persistence of each subgroup was evaluated. The proportions of the F-specific RNA bacteriophage subgroups were measured in wastewaters, after inactivation in surface waters or after wastewater treatment and in mixtures of wastewater of human and animal origin. Our results indicate that phage groups differ in their persistence in the environment and to different disinfecting treatments. The greater survival of subgroups I and II in treated samples hinders the interpretation of results obtained with F-specific RNA bacteriophages. The phages of subgroups III and IV were the least resistant to all treatments. These results should be considered when using genotypes of F-specific RNA as sole tracers for faecal source tracking.


Subject(s)
Feces/virology , RNA Phages/isolation & purification , Waste Disposal, Fluid/standards , Abattoirs/standards , Animals , Humans , RNA Phages/classification , RNA Phages/genetics , Sewage/virology , Viral Plaque Assay
5.
Water Res ; 42(17): 4439-48, 2008 Nov.
Article in English | MEDLINE | ID: mdl-18762313

ABSTRACT

Four water reclamation facilities in north-eastern Spain were monitored over 2 years to determine the occurrence and concentrations of a set of microbial indicators (total coliforms, Escherichia coli, enterococci, spores of sulphite reducing clostridia, somatic coliphages, F-specific RNA phages, phages infecting Bacteroides fragilis strain RYC2056 and phages infecting Bacteroides tethaiotaomicron strain GA-17), and two selected pathogens (cytopathogenic enteroviruses and viable Cryptosporidium oocysts). The indicator (survival) and index (presence) functions of the various indicators tested were evaluated through the wastewater treatments. The inactivation pattern of all groups of bacteriophages tested was closer to the inactivation of enteroviruses than to the inactivation of the conventional bacterial indicators tested. The inactivation of sulfite reducing clostridia spores and bacteriophages more closely approximates the reduction of viable Cryptosporidium than do the conventional bacterial indicators. We observed neither index functions nor a predictive relationship between any of microbial indicators and viable Cryptosporidium oocysts. In contrast, several regression models (r>0.6) and discriminant functions (67-88% well classified samples) based mostly on numbers of bacteriophages were able to predict both the presence and concentrations of enteroviruses. A combination of both bacterial and bacteriophage indicators seem to be the best choice for ensuring the microbial quality of reclaimed water.


Subject(s)
Conservation of Natural Resources/trends , Preservation, Biological/methods , Water Microbiology , Water Purification/methods , Water/parasitology , Animals , Bacteriophages/isolation & purification , Bacteroides fragilis/isolation & purification , Cryptosporidium/isolation & purification , Enterovirus/isolation & purification , Enterovirus/pathogenicity , Escherichia coli/isolation & purification , Predictive Value of Tests , Regression Analysis
6.
Appl Environ Microbiol ; 71(9): 5659-62, 2005 Sep.
Article in English | MEDLINE | ID: mdl-16151173

ABSTRACT

Bacteriophages infecting Bacteroides are potentially a good tool for fecal source tracking, but different Bacteroides host strains are needed for different geographic areas. A feasible method for isolating Bacteroides host strains for phages present in human fecal material is described. Useful strains were identified for application in Spain and the United Kingdom. One strain, GA-17, identified as Bacteroides thetaiotaomicron, was tested in several locations in Europe with excellent performance in Southern Europe.


Subject(s)
Bacteriophages/isolation & purification , Bacteroides/classification , Environmental Monitoring/methods , Feces/microbiology , Water Pollution , Bacteriophage Typing , Bacteriophages/physiology , Bacteroides/isolation & purification , Bacteroides/virology , Europe , Feces/virology , Humans , Species Specificity
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