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1.
Phys Rev Lett ; 132(2): 026001, 2024 Jan 12.
Article in English | MEDLINE | ID: mdl-38277582

ABSTRACT

Confinement can have a considerable effect on the behavior of particle systems and is therefore an effective way to discover new phenomena. A notable example is a system of identical bosons at low temperature under an external field mimicking an isotropic bubble trap, which constrains the particles to a portion of space close to a spherical surface. Using path integral Monte Carlo simulations, we examine the spatial structure and superfluid fraction in two emblematic cases. First, we look at soft-core bosons, finding the existence of supersolid cluster arrangements with polyhedral symmetry; we show how different numbers of clusters are stabilized depending on the trap radius and the particle mass, and we characterize the temperature behavior of the cluster phases. A detailed comparison with the behavior of classical soft-core particles is provided too. Then, we examine the case, of more immediate experimental interest, of a dipolar condensate on the sphere, demonstrating how a quasi-one-dimensional supersolid of clusters is formed on a great circle for realistic values of density and interaction parameters. Crucially, this supersolid phase is only slightly disturbed by gravity. We argue that the predicted phases can be revealed in magnetic traps with spherical-shell geometry, possibly even in a lab on Earth. Our results pave the way for future simulation studies of correlated quantum systems in curved geometries.

2.
J Phys Chem A ; 125(50): 10593-10603, 2021 Dec 23.
Article in English | MEDLINE | ID: mdl-34904838

ABSTRACT

Conjugated polymers are promising candidates in the design of polymer solar cell materials with suitable electronic properties. Recent studies show that the use of different functional groups as side chain in thiophene-based polymers changes the electronic and conformation structures. Here we design new thiophene-based molecules by replacing the hydrogen attached to the backbone of P3MT with electron-donating and electron-withdrawing groups. We then calculate the HOMO, LUMO, and HOMO-LUMO energy gap to quantify the theoretical merit of the new polymers as solar absorbers and their inter-ring torsional potential to understand their suitability to link together in high conductivity, extended conjugated systems. Calculations are done with first-principles density functional theory (DFT), implemented using B3LYP with dispersion function and 6-31G(d,p) as basis set. Our results show that the HOMO-LUMO gap is sensibly lowered by donating groups and we found that the substitution of the hydrogen with -NH2, and -F gives an energy gap lower than the energy gap of P3MT. The lowest energy gap was found when substituting with -NH2. Electron-withdrawing groups lower the HOMO, with the overall lowest found when -NO2 is used. -COCl, -CONH2, and -Cl give a steric hindrance greater than that of PTB7, which is set as reference. Our calculations show a possible approach to the rational design of donor materials when substituents are inserted systematically in a generic oligomer.

3.
Entropy (Basel) ; 23(5)2021 May 09.
Article in English | MEDLINE | ID: mdl-34065124

ABSTRACT

We study self-assembly on a spherical surface of a model for a binary mixture of amphiphilic dimers in the presence of guest particles via Monte Carlo (MC) computer simulation. All particles had a hard core, but one monomer of the dimer also interacted with the guest particle by means of a short-range attractive potential. We observed the formation of aggregates of various shapes as a function of the composition of the mixture and of the size of guest particles. Our MC simulations are a further step towards a microscopic understanding of experiments on colloidal aggregation over curved surfaces, such as oil droplets.

4.
Phys Rev E ; 98(1-1): 010103, 2018 Jul.
Article in English | MEDLINE | ID: mdl-30110854

ABSTRACT

We show by extensive molecular dynamics simulations that accurate predictions of liquid-vapor coexistence in molten alkali halides can be achieved in terms of a rigid ion potential description in which temperature-dependent ionic diameters are employed. The new ionic sizes result from the fitting of the experimental isothermal compressibilities, a condition whose physical implications and consequences are illustrated. The same diameters also allow us to formulate confident predictions for the compressibilities of salts in cases where the experimental data are lacking. The extension of the present approach to molten alkali-halide mixtures and to other classes of molten salts is discussed.

5.
Polymers (Basel) ; 10(3)2018 Mar 15.
Article in English | MEDLINE | ID: mdl-30966359

ABSTRACT

We carry out extensive molecular dynamics simulations of thin films of bead-spring models of binary mixtures composed of cyclic and linear polymer chains. We study the equilibrium behavior of the polymer chains for two very different chain lengths, which resemble short (10-mers) and long (100-mers) chains, at different concentrations of the binary mixture. We clearly show how the concentration variable affects the enrichment of either of the two polymer species at the interface, and also how the chain length influences this process.

6.
J Chem Phys ; 147(16): 164502, 2017 Oct 28.
Article in English | MEDLINE | ID: mdl-29096484

ABSTRACT

Values of the fifth virial coefficient, compressibility factors, and fluid-fluid coexistence curves of binary asymmetric nonadditive mixtures of hard disks are reported. The former correspond to a wide range of size ratios and positive nonadditivities and have been obtained through a standard Monte Carlo method for the computation of the corresponding cluster integrals. The compressibility factors as functions of density, derived from canonical Monte Carlo simulations, have been obtained for two values of the size ratio (q = 0.4 and q = 0.5), a value of the nonadditivity parameter (Δ = 0.3), and five values of the mole fraction of the species with the biggest diameter (x1 = 0.1, 0.3, 0.5, 0.7, and 0.9). Some points of the coexistence line relative to the fluid-fluid phase transition for the same values of the size ratios and nonadditivity parameter have been obtained from Gibbs ensemble Monte Carlo simulations. A comparison is made between the numerical results and those that follow from some theoretical equations of state.

7.
J Chem Phys ; 147(14): 144902, 2017 Oct 14.
Article in English | MEDLINE | ID: mdl-29031271

ABSTRACT

The emergence of supramolecular aggregates from simple microscopic interaction rules is a fascinating feature of complex fluids which, besides its fundamental interest, has potential applications in many areas, from biological self-assembly to smart material design. We here investigate by Monte Carlo simulation the equilibrium structure of a two-dimensional mixture of asymmetric dimers and spheres (disks). Dimers and disks are hard particles, with an additional short-range attraction between a disk and the smaller monomer of a dimer. The model parameters and thermodynamic conditions probed are typical of colloidal fluid mixtures. In spite of the minimalistic character of the interaction, we observe-upon varying the relative concentration and size of the two colloidal species-a rich inventory of mesoscale structures at low temperature, such as clusters, lamellæ (i.e., polymer-like chains), and gel-like networks. For colloidal species of similar size and near equimolar concentrations, a dilute fluid of clusters gives way to floating lamellæ upon cooling; at higher densities, the lamellæ percolate through the simulation box, giving rise to an extended network. A crystal-vapour phase-separation may occur for a mixture of dimers and much larger disks. Finally, when the fluid is brought in contact with a planar wall, further structures are obtained at the interface, from layers to branched patterns, depending on the nature of wall-particle interactions.

8.
Article in English | MEDLINE | ID: mdl-28829042

ABSTRACT

A number of references in the bibliography were reported incorrectly.

9.
J Phys Condens Matter ; 29(36): 365102, 2017 Sep 13.
Article in English | MEDLINE | ID: mdl-28661404

ABSTRACT

We report extensive calculations, based on the modified hypernetted chain (MHNC) theory, on the hierarchical reference theory (HRT), and on Monte Carlo simulations, of thermodynamical, structural and phase coexistence properties of symmetric binary hard-core Yukawa mixtures (HCYM) with attractive interactions at equal species concentration. The obtained results are throughout compared with those available in the literature for the same systems. It turns out that the MHNC predictions for thermodynamic and structural quantities are quite accurate in comparison with the MC data. The HRT is equally accurate for thermodynamics, and slightly less accurate for structure. Liquid-vapor (LV) and liquid-liquid (LL) consolute coexistence conditions as emerging from simulations, are also highly satisfactorily reproduced by both the MHNC and HRT for relatively long ranged potentials. When the potential range reduces, the MHNC faces problems in determining the LV binodal line; however, the LL consolute line and the critical end point (CEP) temperature and density turn out to be still satisfactorily predicted within this theory. The HRT also predicts with good accuracy the CEP position. The possibility of employing liquid state theories HCYM for the purpose of reliably determining phase equilibria in multicomponent colloidal fluids of current technological interest, is discussed.

10.
J Phys Condens Matter ; 28(41): 414009, 2016 10 19.
Article in English | MEDLINE | ID: mdl-27545096

ABSTRACT

We perform structural and thermodynamic calculations in the framework of the modified hypernetted chain (MHNC) integral equation closure to the Ornstein-Zernike equation for binary mixtures of size-different particles interacting with hard-core Yukawa pair potentials. We use the Percus-Yevick (PY) bridge functions of a binary mixture of hard-sphere (HSM) particles. The hard-sphere diameters of the PY bridge functions of the HSM system are adjusted so to achieve thermodynamic consistency between the virial and compressibility equations of state. We show the benefit of thermodynamic consistency by comparing the MHNC results with the available computer simulation data reported in the literature, and we demonstrate that the self-consistent thermodynamic theory provides a better reproduction of the simulation data over other microscopic theories.

11.
J Phys Condens Matter ; 28(41): 414008, 2016 10 19.
Article in English | MEDLINE | ID: mdl-27546819

ABSTRACT

In order to design a flexible molecular model that mimics the chemical moieties of a polyatomic molecule, we propose the 'composite-sphere' model that can assemble the essential elements to produce the structure of the target molecule. This is likened to the polymerization process where monomers assemble to form the polymer. The assemblage is built into the pair interaction potentials which can 'react' (figuratively) with selective pieces into various bonds. In addition, we preserve the spherical symmetries of the individual pair potentials so that the isotropic Ornstein-Zernike equation (OZ) for multi-component mixtures can be used as a theoretical framework. We first test our approach on generating a dumbbell molecule. An equimolar binary mixture of hard spheres and square-well spheres are allowed to react to form a dimer. As the bond length shrinks to zero, we create a site-site model of a Janus-like molecule with a repulsive moiety and an attractive moiety. We employ the zero-separation (ZSEP) closure to solve the OZ equations. The structure and thermodynamic properties are calculated at three isotherms and at several densities and the results are compared with Monte Carlo simulations. The close agreement achieved demonstrates that the ZSEP closure is a reliable theory for this composite-sphere fluid model.

12.
Phys Rev E ; 93(5): 050501, 2016 05.
Article in English | MEDLINE | ID: mdl-27300817

ABSTRACT

We report a molecular dynamics simulation study of free-standing films of a blend of linear and cyclic polymer chains. We find that the composition of linear chains at the interface is enhanced relative to their bulk value for short chains but is depleted for long chains. Our findings are in agreement with recent experimental evidence reported for blends of short linear and cyclic polystyrene chains and highlight the genuine surface behavior in the short chain-length regime where theoretical predictions are more difficult. We highlight surface enrichment at low-energy surfaces as the result of competition between different entropic and enthalpic contributions to the interfacial free energy of the system.

13.
J Chem Phys ; 141(21): 214508, 2014 Dec 07.
Article in English | MEDLINE | ID: mdl-25481153

ABSTRACT

We have studied the equation of state (EOS) and the equilibrium behavior of a two-component mixture of equal-sized, nonadditive hard disks with an interspecies collision diameter that is larger than that of each component. For this purpose, we have calculated the fifth virial coefficient by evaluating numerically the irreducible cluster integrals by a Monte Carlo method. This information is used to calculate both the virial equation of state and an equation of state based on a resummation of the virial expansion. Then, the fluid-fluid phase coexistence boundaries are determined by integrating the EOS so as to obtain the free energy of the system. Canonical and Gibbs ensemble Monte Carlo simulations over a wide range of nonadditivity are also performed in order to provide a benchmark to the theoretical predictions.

14.
J Chem Phys ; 141(4): 044508, 2014 Jul 28.
Article in English | MEDLINE | ID: mdl-25084927

ABSTRACT

In this article, we perform Gibbs ensemble Monte Carlo (GEMC) simulations of liquid-liquid phase coexistence in nonadditive hard-sphere mixtures (NAHSMs) for different size ratios and non-additivity parameters. The simulation data are used to provide a benchmark to a number of theoretical and mixed theoretical/computer simulation approaches which have been adopted in the past to study phase equilibria in NAHSMs, including the method of the zero of the Residual Multi-Particle Entropy, Integral Equation Theories (IETs), and classical Density Functional Theory (DFT). We show that while the entropic criterium is quite accurate in predicting the location of phase equilibrium curves, IETs and DFT provide at best a semi-quantitative reproduction of GEMC demixing curves.

15.
Article in English | MEDLINE | ID: mdl-24229139

ABSTRACT

The bulk phase behavior of a fluid is typically altered when the fluid is brought into confinement by the walls of a random porous medium. Inside the porous medium, phase-transition points are shifted, or may disappear altogether. A crucial determinant is how the walls interact with the fluid particles. In this work, we consider the situation whereby the walls are neutral with respect to the liquid and vapor phases. In order to realize the condition of strict neutrality, we use a symmetric binary mixture inside a porous medium that interacts identically with mixture species. Monte Carlo simulations are then used to obtain the phase behavior. Our main finding is that, in the presence of the porous medium, a liquid-vapor critical point still exists. At the critical point, the distribution of the order parameter remains scale invariant, but self-averaging is violated. These findings provide further evidence that random confinement by neutral walls induces critical behavior of the random Ising model (i.e., Ising models with dilution type disorder, where the disorder couples to the energy).

16.
J Chem Phys ; 138(11): 115103, 2013 Mar 21.
Article in English | MEDLINE | ID: mdl-23534667

ABSTRACT

Bovine Serum Albumine (BSA) aqueous solutions in the presence of NaCl are investigated for different protein concentrations and low to intermediate ionic strengths. Protein interactions are modeled via a charge-screened colloidal model, in which the range of the potential is determined by the Debye-Hückel constant. We use Monte Carlo computer simulations to calculate the structure factor, and assume an oblate ellipsoidal form factor for BSA. The theoretical scattered intensities are found in good agreement with the experimental small angle X-ray scattering intensities available in the literature. The performance of well-known integral equation closures to the Ornstein-Zernike equation, namely the mean spherical approximation, the Percus-Yevick, and the hypernetted chain equations, is also assessed with respect to computer simulation.


Subject(s)
Serum Albumin, Bovine/metabolism , Sodium Chloride/metabolism , Animals , Cattle , Computer Simulation , Models, Biological , Monte Carlo Method , Osmolar Concentration , Scattering, Small Angle , Serum Albumin, Bovine/chemistry , Sodium Chloride/chemistry , X-Ray Diffraction
17.
J Phys Chem B ; 116(7): 2114-20, 2012 Feb 23.
Article in English | MEDLINE | ID: mdl-22277046

ABSTRACT

Lysozyme interactions in an aqueous solution are modeled via the Derjaguin-Landau-Verwey-Overbeek (DLVO) theory. We calculate the structural functions at different pH values by means of Monte Carlo computer simulation and integral equation theories. The theoretical structure factor is then used to evaluate the scattered intensities, which are compared with the experimental small-angle neutron scattering data reported in Philos. Mag.2011, 91, 2066. We find that the DLVO theory reproduces only qualitatively the tendency of protein interactions to become more short-range and attractive at low ionic strength; however, at sufficiently high ionic strength, the theory becomes quantitative. At the higher investigated pH values, DLVO theory predicts the formation of protein aggregates driven by the competition of short-range attraction and long-range repulsion.


Subject(s)
Colloids/chemistry , Muramidase/chemistry , Water/chemistry , Computer Simulation , Models, Chemical , Monte Carlo Method , Osmolar Concentration
18.
Phys Rev Lett ; 101(24): 246101, 2008 Dec 12.
Article in English | MEDLINE | ID: mdl-19113634

ABSTRACT

We study the liquid-liquid demixing of a binary mixture with a symmetrical coupling to the quenched disorder by means of computer simulation. The critical point in the thermodynamic limit is estimated both by assuming the knowledge of the critical exponents and independently of them. The finite-size scaling analysis of the susceptibilities and the values of the critical amplitudes show that the universality class of the fluid mixture is compatible with the diluted quenched-Ising model. Our findings extend the class of systems exhibiting the same critical behavior of diluted antiferromagnets.

19.
Phys Rev Lett ; 101(24): 248102, 2008 Dec 12.
Article in English | MEDLINE | ID: mdl-19113673

ABSTRACT

We employ nonequilibrium molecular dynamics simulation to characterize the effective interactions between lysozyme molecules involved in the formation of two hydrophobic crystal contacts. We show that the effective interactions between crystal contacts do not exceed a few kT, the range of the attractive part of the potential is less than 4 angstroms, and, within this range, there is a significant depletion of water density between two protein contacts. Our findings highlight the different natures of protein crystallization and protein recognition processes.


Subject(s)
Muramidase/chemistry , Water/chemistry , Chemical Phenomena , Computer Simulation , Crystallization , Hydrophobic and Hydrophilic Interactions , Solutions , Thermodynamics
20.
J Phys Condens Matter ; 20(11): 115101, 2008 Mar 19.
Article in English | MEDLINE | ID: mdl-21694215

ABSTRACT

We use theory and computer simulation to study the structure and phase behavior of colloid-polymer mixtures in the presence of quenched disorder. The Asakura-Oosawa model (AO) (Asakura and Oosawa 1954 J. Chem. Phys. 22 1255) is used to describe the colloid-colloid, colloid-polymer, and polymer-polymer pair interactions. We then investigate the behavior of this model in the presence of frozen-in (quenched) obstacles. The obstacles will be placed according to two different scenarios, both of which are experimentally feasible. In the first scenario, polymers are distributed at positions drawn from an ideal gas configuration. In the second scenario, colloidal particles are distributed at positions drawn from an equilibrium hard sphere configuration. We investigate how the unmixing transition of the AO model is affected by the type of quenched disorder. The theoretical formalism is based on the replica method of Given and Stell (1994 Physica A 209 495). Our foremost aim is to test the accuracy of three common closures to the replica Ornstein-Zernike equations, namely the hypernetted chain, the Percus-Yevick, and the Martinov-Sarkisov equations. The accuracy is determined by comparison with grand canonical Monte Carlo simulations. We find that, for quenched polymer disorder, all three closures perform remarkably well. However, when quenched colloid disorder is considered, i.e. the second mentioned scenario, the predictions of all three closures worsen dramatically.

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