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1.
Bioorg Med Chem Lett ; 26(15): 3746-53, 2016 08 01.
Article in English | MEDLINE | ID: mdl-27268696

ABSTRACT

Several isoxazole-containing series of FXR agonists have been published over the last 15years, subsequent to the prototypical amphiphilic 'hammerhead'-type structure that was originally laid out by GW4064, the first potent synthetic FXR agonist. A set of novel compounds where the hammerhead is connected to the terminal carboxylic acid-bearing aryl or heteroaryl moiety by either a cyclopropyl, a hydroxycyclobutyl or a hydroxyazetidinyl linker was synthesized in order to improve upon the ADME properties of such isoxazoles. The resulting compounds all demonstrated high potencies at the target receptor FXR but with considerable differences in their physicochemical and in vivo profiles. The structure-activity relationships for key chemical features that have a major impact on the in vivo pharmacology of this series are discussed.


Subject(s)
Isoxazoles/pharmacology , Receptors, Cytoplasmic and Nuclear/agonists , Dose-Response Relationship, Drug , Humans , Isoxazoles/chemical synthesis , Isoxazoles/chemistry , Molecular Structure , Structure-Activity Relationship
2.
Int J Cancer ; 136(11): 2693-704, 2015 Jun 01.
Article in English | MEDLINE | ID: mdl-25363753

ABSTRACT

The nuclear bile acid receptor Farnesoid X receptor (FXR) is strongly expressed in liver and intestine, controls bile acid and lipid homeostasis and exerts tumor-protective functions in liver and intestine. Histidine-rich glycoprotein (HRG) is an abundant plasma protein produced by the liver with the proposed function as a pattern recognition molecule involved in the clearance of immune complexes, necrotic cells and pathogens, the modulation of angiogenesis, the normalization of deranged endothelial vessel structure in tumors and tumor suppression. FXR recognition sequences were identified within a human HRG promoter fragment that mediated FXR/FXR-agonist dependent reporter gene activity in vitro. We show that HRG is a novel transcriptional target gene of FXR in human hepatoma cells, human upcyte® primary hepatocytes and 3D human liver microtissues in vitro and in mouse liver in vivo. Prolonged administration of the potent nonsteroidal FXR agonist PX20606 increases HRG levels in mouse plasma. Finally, daily oral administration of this FXR agonist for seven days resulted in a significant increase of HRG levels in the plasma of healthy human male volunteers during a clinical Phase I safety study. HRG might serve as a surrogate marker indicative of liver-specific FXR activation in future human clinical studies. Furthermore, potent FXR agonists might be beneficial in serious health conditions where HRG is reduced, for example, in hepatocellular carcinoma but also other solid cancers, liver failure, sepsis and pre-eclampsia.


Subject(s)
Benzoates/administration & dosage , Hepatocytes/metabolism , Isoxazoles/administration & dosage , Liver/metabolism , Proteins/genetics , Proteins/metabolism , Receptors, Cytoplasmic and Nuclear/agonists , Receptors, Cytoplasmic and Nuclear/metabolism , Animals , Benzoates/pharmacology , Cell Line , Gene Expression Profiling , Gene Expression Regulation/drug effects , Hep G2 Cells , Humans , Isoxazoles/pharmacology , Liver/pathology , Male , Mice
3.
J Pharmacol Exp Ther ; 343(3): 556-67, 2012 Dec.
Article in English | MEDLINE | ID: mdl-22918042

ABSTRACT

Farnesoid X receptor (FXR), a bile acid-activated nuclear hormone receptor, plays an important role in the regulation of cholesterol and more specifically high-density lipoprotein (HDL) homeostasis. Activation of FXR is reported to lead to both pro- and anti-atherosclerotic effects. In the present study we analyzed the impact of different FXR agonists on cholesterol homeostasis, plasma lipoprotein profiles, and transhepatic cholesterol efflux in C57BL/6J mice and cynomolgus monkeys and atherosclerosis development in cholesteryl ester transfer protein transgenic (CETPtg) low-density lipoprotein receptor (LDLR) (-/-) mice. In C57BL/6J mice on a high-fat diet the synthetic FXR agonists isopropyl 3-(3,4-difluorobenzoyl)-1,1-dimethyl-1,2,3,6-tetrahydroazepino[4,5-b]indole-5-carboxylate (FXR-450) and 4-[2-[2-chloro-4-[[5-cyclopropyl-3-(2,6-dichlorophenyl)-4-isoxazolyl]methoxy]phenyl]cyclopropyl]benzoic acid (PX20606) demonstrated potent plasma cholesterol-lowering activity that affected all lipoprotein species, whereas 3-[2-[2-chloro-4-[[3-(2,6-dichlorophenyl)-5-(1-methylethyl)-4-isoxazolyl]methoxy]phenyl]ethenyl]benzoic acid (GW4064) and 6-ethyl chenodeoxycholic acid (6-ECDCA) showed only limited effects. In FXR wild-type mice, but not FXR(-/-) mice, the more efficacious FXR agonists increased fecal cholesterol excretion and reduced intestinal cholesterol (re)uptake. In CETPtg-LDLR(-/-) mice PX20606 potently lowered total cholesterol and, despite the observed HDL cholesterol (HDLc) reduction, caused a highly significant decrease in atherosclerotic plaque size. In normolipidemic cynomolgus monkeys PX20606 and 6-ECDCA both reduced total cholesterol, and PX20606 specifically lowered HDL(2c) but not HDL(3c) or apolipoprotein A1. That pharmacological FXR activation specifically affects this cholesterol-rich HDL(2) subclass is a new and highly interesting finding and sheds new light on FXR-dependent HDLc lowering, which has been perceived as a major limitation for the clinical development of FXR agonists.


Subject(s)
Anticholesteremic Agents/pharmacology , Atherosclerosis/prevention & control , Benzoates/pharmacology , Cholesterol Ester Transfer Proteins/metabolism , Cholesterol/blood , Isoxazoles/pharmacology , Lipoproteins, HDL/blood , Liver/drug effects , Receptors, Cytoplasmic and Nuclear/agonists , Receptors, LDL/metabolism , Animals , Anticholesteremic Agents/chemistry , Anticholesteremic Agents/therapeutic use , Aorta/drug effects , Aorta/metabolism , Aorta/pathology , Atherosclerosis/blood , Atherosclerosis/metabolism , Benzoates/chemistry , Benzoates/therapeutic use , Biological Transport , Cholesterol/administration & dosage , Cholesterol/metabolism , Cholesterol Ester Transfer Proteins/genetics , Diet, High-Fat , Disease Models, Animal , Feces/chemistry , Female , Humans , Isoxazoles/chemistry , Isoxazoles/therapeutic use , Liver/metabolism , Macaca fascicularis , Male , Mice , Mice, Inbred C57BL , Mice, Transgenic , Molecular Structure , Rats , Rats, Sprague-Dawley , Receptors, LDL/genetics , Species Specificity , Structure-Activity Relationship
4.
J Exp Biol ; 214(Pt 10): 1748-53, 2011 May 15.
Article in English | MEDLINE | ID: mdl-21525322

ABSTRACT

The metabolic energy state of sponge tissue in vivo is largely unknown. Quantitative bioluminescence-based imaging was used to analyze the ATP distribution of Suberites domuncula (Olivi 1792) tissue, in relation to differences between the cortex and the medulla. This method provides a quantitative picture of the ATP distribution closely reflecting the in vivo situation. The obtained data suggest that the highest ATP content occurs around channels in the sponge medulla. HPLC reverse-phase C-18, used for measurement of ATP content, established a value of 1.62 µmol ATP g⁻¹ dry mass in sponge medulla, as opposed to 0.04 µmol ATP g⁻¹ dry mass in the cortex, thus indicating a specific and defined energy distribution. These results correlate with the mitochondria localization, determined using primary antibodies against cytochrome oxidase c subunit 1 (COX1) (immunostaining), as well as with the distribution of arginine kinase (AK), essential for cellular energy metabolism (in situ hybridization with AK from S. domuncula; SDAK), in sponge sections. The highest energy consumption seemed to occur in choanocytes, the cells that drive the water through the channel system of the sponge body. Taken together, these results showed that the majority of energetic metabolism in S. domuncula occurs in the medulla, in the proximity of aqueous channels.


Subject(s)
Adenosine Triphosphate/metabolism , Energy Metabolism/physiology , Mitochondria/physiology , Organ Specificity/physiology , Suberites/cytology , Animals , Arginine Kinase/metabolism , Chromatography, High Pressure Liquid , Image Processing, Computer-Assisted , Immunohistochemistry , In Situ Hybridization , Suberites/metabolism
5.
Bioorg Med Chem Lett ; 20(16): 4911-7, 2010 Aug 15.
Article in English | MEDLINE | ID: mdl-20638278

ABSTRACT

To overcome the known liabilities of GW4064 a series of analogs were synthesized where the stilbene double bond is replaced by an oxymethylene or amino-methylene linker connecting a terminal benzoic acid with a substituted heteroaryl in the middle ring position. As a result we discovered compounds with increased potency in vitro that cause dose-dependent reduction of plasma triglycerides and cholesterol in db/db mice down to 2 x 1 mg/kg/day upon oral administration.


Subject(s)
Anti-Obesity Agents/chemical synthesis , Isoxazoles/chemistry , Receptors, Cytoplasmic and Nuclear/agonists , Administration, Oral , Animals , Anti-Obesity Agents/chemistry , Anti-Obesity Agents/pharmacology , Binding Sites , Cholesterol/blood , Computer Simulation , Isoxazoles/chemical synthesis , Isoxazoles/pharmacology , Mice , Mice, Obese , Receptors, Cytoplasmic and Nuclear/metabolism , Triglycerides/blood
6.
Micron ; 39(4): 447-60, 2008 Jun.
Article in English | MEDLINE | ID: mdl-17383885

ABSTRACT

Some sponges [phylum Porifera], e.g. the demosponges Lubomirskia baicalensis or Axinella polypoides, show an arborescent growth form. In the freshwater sponge L. baicalensis this morphotype is seen mostly in depths below 4m while in more shallow regions it grows as a crust. The different growth forms are determined in nature very likely by water current and/or light. The branches of this species are composed of modules, arranged along the apical-basal axis. The modules are delimited by a precise architecture of the spicule bundles; longitudinal bundles originate from the apex of the earlier module, while at the basis of each module these bundles are cross-linked by traverse bundles under formation of annuli. Genes encoding putative morphogenetic factors, myotrophin and epidermal growth factor (EGF)-like molecules, and one gene of an antagonist for the Wnt signaling pathway, the soluble frizzled molecule, have been identified and characterized. Their expression levels as well as those of silicatein, one major spicule-forming molecule, have been studied in the crusts and the modules. The data revealed that at the apices of each module higher level of expression of myotrophin and EGF can be detected, while the base of each module is characterized by a high steady-state expression level of soluble frizzled molecule. These results suggest that module formation in L. baicalensis is controlled by a tuned interaction of agonistic (e.g., myotrophin and EGF) as well as antagonistic morphogenetic factors (e.g., soluble frizzled molecule).


Subject(s)
Morphogenesis , Porifera/growth & development , Amino Acid Sequence , Animals , Blotting, Northern , Epidermal Growth Factor/analysis , Frizzled Receptors/analysis , Intercellular Signaling Peptides and Proteins/analysis , Molecular Sequence Data , Porifera/metabolism , Reverse Transcriptase Polymerase Chain Reaction
7.
Bioorg Med Chem ; 15(17): 5877-87, 2007 Sep 01.
Article in English | MEDLINE | ID: mdl-17582775

ABSTRACT

Two new bromopyrrole alkaloids, damipipecolin (1) and damituricin (2), have been isolated from the Mediterranean sponge Axinella damicornis, and their structures established through spectroscopic methods. Compounds 1 and 2 extend the structural variety of the so far known pyrrole alkaloids; in these compounds, the 4-bromopyrrole 2-carboxylic acid is directly condensed with a non-protein cyclic alpha-amino acid, the (2R, 4R)-trans-4-hydroxypipecolic acid and (2R, 4R)-cis-N,N'-dimethyl-4-hydroxyproline (D-turicine) in 1 and 2, respectively. Compounds 1 and 2 were found to display a modulating effect of the serotonin receptor activity in vitro.


Subject(s)
Alkaloids/chemistry , Axinella/chemistry , Bromine/chemistry , Pyrroles/chemistry , Alkaloids/isolation & purification , Alkaloids/pharmacology , Animals , Calcium/metabolism , Cell Survival/drug effects , Cells, Cultured , Glutamic Acid/pharmacology , Humans , Mediterranean Region , Molecular Structure , N-Methylaspartate/pharmacology , Neurons/drug effects , Neurons/metabolism , Rats , Suberites/drug effects , Suberites/metabolism
8.
FEBS J ; 274(1): 23-36, 2007 Jan.
Article in English | MEDLINE | ID: mdl-17222175

ABSTRACT

The endemic freshwater sponge Lubomirskia baicalensis lives in Lake Baikal in winter (samples from March have been studied) under complete ice cover at near 0 degrees C, and in summer in open water at 17 degrees C (September). In March, specimens show high metabolic activity as reflected by the production of gametes. L. baicalensis lives in symbiosis with green dinoflagellates, which are related to Gymnodinium sanguineum. Here we show that these dinoflagellates produce the toxin okadaic acid (OA), which is present as a free molecule as well as in a protein-bound state. In metazoans OA inhibits both protein phosphatase-2A and protein phosphatase-1 (PP1). Only cDNA corresponding to PP1 could be identified in L. baicalensis and subsequently isolated from a L. baicalensis cDNA library. The deduced polypeptide has a molecular mass of 36 802 Da and shares the characteristic domains known from other protein phosphatases. As determined by western blot analysis, the relative amount of PP1 is almost the same in March (under ice) and September (summer). PP1 is not inhibited by low OA concentrations (100 nm); concentrations above 300 nm are required for inhibition. A sponge cell culture system (primmorphs) was used to show that at low temperatures (4 degrees C) expression of hsp70 is strongly induced and hsp70 synthesis is augmented after incubation with 100 nm OA to levels measured at 17 degrees C. In the enriched extract, PP1 activity at 4 degrees C is close to that measured at 17 degrees C. Immunoabsorption experiments revealed that hsp70 contributes to the high protein phosphatase activity at 4 degrees C. From these data we conclude that the toxin OA is required for the expression of hsp70 at low temperature, and therefore contributes to the cold resistance of the sponge.


Subject(s)
Cold Temperature , Dinoflagellida/physiology , Fresh Water , Okadaic Acid/pharmacology , Porifera/physiology , Symbiosis/physiology , Amino Acid Sequence , Animals , Catalytic Domain , DNA, Complementary/chemistry , Dinoflagellida/metabolism , HSP70 Heat-Shock Proteins/metabolism , Humans , Microscopy, Electron, Transmission , Models, Biological , Molecular Sequence Data , Okadaic Acid/metabolism , Phosphoprotein Phosphatases/metabolism , Protein Phosphatase 1 , Protein Phosphatase 2
9.
Mol Biol Evol ; 24(3): 792-804, 2007 Mar.
Article in English | MEDLINE | ID: mdl-17190971

ABSTRACT

During evolution and with the emergence of multicellular animals, the need arose to ward off foreign organisms that threaten the integrity of the animal body. Among many different receptors that participate in the recognition of microbial invaders, toll-like receptors (TLRs) play an essential role in mediating the innate immune response. After binding distinct microbial components, TLRs activate intracellular signaling cascades that result in an induced expression of diverse antimicrobial molecules. Because sponges (phylum Porifera) are filter feeders, they are abundantly exposed to microorganisms that represent a potential threat. Here, we describe the identification, cloning, and deduced protein sequence from 3 major elements of the poriferan innate response (to bacterial lipopeptides): the TLR, the IL-1 receptor-associated kinase-4-like protein (IRAK-4l), and a novel effector caspase from the demosponge Suberites domuncula. Each molecule shares significant sequence similarity with its homologues in higher Metazoa. Sequence homologies were found in particular within the family-specific domains toll/interleukin-1 receptor/resistance (TLR family), Ser/Thr/Tyr kinase domain (IRAK family), and CASc (caspase family). In addition, in situ hybridization and immunohistological analyses revealed an abundance of SDTLR (TLR) transcripts in epithelial layers of the sponge surface (exopinacoderm and endopinacoderm). Furthermore, it is shown that both SDTLR and SDIRAK-4 like (IRAK) are expressed constitutively, regardless of treatment with synthetic triacyl lipopeptide Pam(3)Cys-Ser-(Lys)(4). In contrast, SDCASL (caspase) expression is highly Pam(3)Cys-Ser-(Lys)(4) inducible. However, blocking of the lipopeptide with recombinant TLR prior to its application completely prevented the induced expression of this poriferan caspase. These results underscore that the phylogenetically oldest extant metazoan phylum is provided already with the signaling pathways of the antimicrobial host-defense system of Metazoa.


Subject(s)
Immunity, Innate/genetics , Phylogeny , Porifera/genetics , Toll-Like Receptors/genetics , Amino Acid Sequence , Animals , Base Sequence , Blotting, Northern , Caspases/genetics , Caspases/immunology , Cluster Analysis , Croatia , DNA Primers , Immunohistochemistry , In Situ Hybridization , Interleukin-1 Receptor-Associated Kinases/genetics , Interleukin-1 Receptor-Associated Kinases/immunology , Molecular Sequence Data , Porifera/immunology , Sequence Analysis, DNA , Toll-Like Receptors/immunology
10.
J Histochem Cytochem ; 54(9): 1031-40, 2006 Sep.
Article in English | MEDLINE | ID: mdl-16709731

ABSTRACT

The skeleton of demosponges is built of spicules consisting of biosilica. Using the primmorph system from Suberites domuncula, we demonstrate that silicatein, the biosilica-synthesizing enzyme, and silicase, the catabolic enzyme, are colocalized at the surface of growing spicules as well as in the axial filament located in the axial canal. It is assumed that these two enzymes are responsible for the deposition of biosilica. In search of additional potential structural molecules that might guide the mineralization process during spiculogenesis to species-specific spicules, electron microscopic studies with antibodies against galectin and silicatein were performed. These studies showed that silicatein forms a complex with galectin; the strings/bundles of this complex are intimately associated with the surface of the spicules and arranged concentrically around them. Collagen fibers are near the silactein/galectin complexes. The strings/bundles formed from silicatein/galectin display a lower degree of orientation than the collagen fibers arranged in a highly ordered pattern around the spicules. These data indicate that species-specific formation of spicules involves a network of (diffusible) regulatory factor(s) controlling enzymatic silica deposition; this mineralization process proceeds on a galectin/collagen organic matrix.


Subject(s)
Suberites/metabolism , Suberites/ultrastructure , Amino Acid Sequence , Animals , Cathepsins/metabolism , Collagen/metabolism , Galectins/metabolism , Histocytochemistry , Microscopy, Electron , Molecular Sequence Data , Silicon Dioxide/metabolism , Suberites/growth & development
11.
DNA Cell Biol ; 25(3): 152-64, 2006 Mar.
Article in English | MEDLINE | ID: mdl-16569194

ABSTRACT

Like in all other Metazoa, also in sponges (Porifera) proliferation, differentiation, and death of cells are controlled by apoptotic processes, thus allowing the establishment of a Bauplan (body plan). The demosponge Lubomirskia baicalensis from the Lake Baikal is especially suitable to assess the role of the apoptotic molecules, since its grade of construction is highly elaborated into an encrusting base and branches composed of modules lined up along the apical-basal axis. The four cDNAs, ALG-2, BAK, MA-3, and Bcl-2, were isolated from this sponge species. The expression levels of these genes follow characteristic gradients. While the proapoptotic genes are highly expressed at the base of the branches and comparably low at the top, the pro-survival gene follows an opposite gradient. Parallel with the tuned expression of these genes, the activities of the apoptosis-executing enzymes caspase-8 (IETDase activity) and caspase-3 (DEVDase activity) are lowest at the top of the branch and highest at their base. This characteristic expression/activity pattern of the genes/enzymes, which had been determined in a few specimens, collected from an unpolluted, natural site, appears reversed in specimens collected from an anthropogenically polluted site. These findings indicate the involvement of apoptotic proteins in the axis formation (branches) in L. baicalensis.


Subject(s)
Apoptosis/genetics , Cell Polarity/genetics , Fresh Water , Gene Expression , Porifera/genetics , Proto-Oncogene Proteins c-bcl-2/genetics , Amino Acid Sequence , Animals , Blotting, Northern , Caspase 3 , Caspase 8 , Caspases/analysis , Conserved Sequence , DNA, Complementary/genetics , DNA, Complementary/isolation & purification , EF Hand Motifs , Glutathione Peroxidase/analysis , Models, Biological , Molecular Sequence Data , Phylogeny , Porifera/enzymology , Porifera/metabolism , Protein Structure, Tertiary , Russia , Sequence Analysis, DNA , Sequence Homology, Amino Acid
12.
Bioorg Med Chem ; 14(1): 17-24, 2006 Jan 01.
Article in English | MEDLINE | ID: mdl-16169235

ABSTRACT

The Mediterranean sponge Axinella verrucosa has been investigated for its alkaloid composition and has been found to produce a complex mixture of bromopyrrole alkaloids. Along with the previously isolated compounds 5-18, four novel alkaloids of this class, compounds 1-4, have been isolated, and their structures established through spectroscopic methods. Compounds 1-4 were found to display neuroprotective activity against the agonists serotonin and glutamate in vitro.


Subject(s)
Alkaloids/isolation & purification , Alkaloids/pharmacology , Porifera/chemistry , Pyrroles/isolation & purification , Pyrroles/pharmacology , Alkaloids/chemistry , Animals , Calcium/metabolism , Cell Line , Chromatography, Thin Layer , Excitatory Amino Acid Antagonists/pharmacology , Glutamic Acid/drug effects , Magnetic Resonance Spectroscopy , Molecular Structure , Neurons/drug effects , Neurons/metabolism , Pyrroles/chemistry , Quisqualic Acid/pharmacology , Serotonin/pharmacology , Serotonin Antagonists/pharmacology , Spectrometry, Mass, Electrospray Ionization , Spectrometry, Mass, Fast Atom Bombardment
13.
Dev Genes Evol ; 216(5): 229-42, 2006 May.
Article in English | MEDLINE | ID: mdl-16380844

ABSTRACT

The freshwater sponge Lubomirskia baicalensis (from Lake Baikal) is characterized by a body plan composed of serial modules which are arranged along an apical-basal axis. In shallow water, the sponge occurs only encrusting, while in deeper environment (>3 m), this species forms branches and grows in an arborescent manner. Each module is stabilized by bundles of spined oxeas (amphioxeae spicules). The spicules are surrounded by an organic matrix. cDNAs for structural proteins (silicatein and mannose-binding lectin (MBL)) as well as for one regulatory protein (mago nashi) were isolated from L. baicalensis. Surprisingly the silicatein alpha molecule exists in several, at least four, isoforms (a1 to a4). Expression studies revealed that the steady-state levels of transcripts for the silicateins, the mannose-binding lectin, and mago nashi are highest at the top of the branches, while only very low levels are found in cells at the base. Based on in situ hybridization studies, evidence is presented that the spicule formation (1) starts and is completed inside of the bundles, and (2) occurs together with the mannose-binding lectin from the surfaces of the bundles. The data suggest that the modules are sequentially formed. It is speculated that the expression of the silicateins and the mannose-binding lectin might be (partially) controlled by mago nashi.


Subject(s)
Body Patterning , Cathepsins/metabolism , Mannose-Binding Lectin/metabolism , Porifera/anatomy & histology , Porifera/metabolism , Amino Acid Sequence , Animals , Base Sequence , Cathepsins/genetics , Cathepsins/ultrastructure , Conserved Sequence , Genetic Variation , In Situ Hybridization , Mannose-Binding Lectin/ultrastructure , Models, Biological , Molecular Sequence Data , Phylogeny , Porifera/growth & development , Porifera/ultrastructure , Protein Isoforms/genetics , Protein Isoforms/metabolism , Sequence Homology, Amino Acid
14.
J Biol Chem ; 280(30): 27949-59, 2005 Jul 29.
Article in English | MEDLINE | ID: mdl-15923643

ABSTRACT

Sponges (phylum Porifera) are the phylogenetically oldest metazoa; as filter feeders, they are abundantly exposed to marine microorganisms. Here we present data indicating that the demosponge Suberites domuncula is provided with a recognition system for gram-negative bacteria. The lipopolysaccharide (LPS)-interacting protein was identified as a receptor on the sponge cell surface, which recognizes the bacterial endotoxin LPS. The cDNA was isolated, and the protein (Mr 49,937) was expressed. During binding to LPS, the protein dimerizes and interacts with MyD88, which was also identified and cloned. The sponge MyD88 (Mr 28,441) is composed of two protein interaction domains, a Toll/interleukin-1 receptor domain (found in MyD88 and in Toll-like receptors) and a death domain (present in MyD88 and interleukin-1 receptor-associated kinase). Northern blot experiments and in situ hybridization studies showed that after LPS treatment, the level of the LPS-interacting protein remains unchanged, whereas MyD88 is strongly up-regulated. A perforin-like molecule (Mr 74,171), the macrophage-expressed protein, was identified as an executing molecule of this pathway. This gene is highly expressed after LPS treatment, especially at the surfaces of the animals. The recombinant protein possesses biological activity and eliminates gram-negative bacteria; it is inactive against gram-positive bacteria. These data indicate that S. domuncula is provided with an innate immune system against gram-negative bacteria; the ligand LPS (a pathogen-associated molecular pattern) is recognized by the pattern recognition receptor (LPS-interacting protein), which interacts with MyD88. A signal transduction is established, which results in an elevated expression of MyD88 as well as of the macrophage-expressed protein as an executing protein.


Subject(s)
Antigens, Differentiation/chemistry , Membrane Glycoproteins/chemistry , Receptors, Immunologic/chemistry , Suberites/immunology , Suberites/microbiology , Adaptor Proteins, Signal Transducing , Amino Acid Sequence , Animals , Blotting, Northern , Blotting, Western , Cloning, Molecular , Cross-Linking Reagents/pharmacology , DNA, Complementary/metabolism , Dimerization , Fluorescein-5-isothiocyanate/pharmacology , Gene Library , Immunohistochemistry , Immunoprecipitation , In Situ Hybridization , Ligands , Lipopolysaccharides/chemistry , Macrophages/metabolism , Models, Biological , Molecular Sequence Data , Myeloid Differentiation Factor 88 , Perforin , Phylogeny , Pore Forming Cytotoxic Proteins , Protein Binding , Protein Structure, Tertiary , RNA/chemistry , Recombinant Proteins/chemistry , Sequence Homology, Amino Acid , Signal Transduction , Suberites/metabolism , Up-Regulation
15.
Genomics ; 85(6): 666-78, 2005 Jun.
Article in English | MEDLINE | ID: mdl-15885494

ABSTRACT

The formation of spicules is a complicated morphogenetic process in sponges (phylum Porifera). The primmorph system was used to demonstrate that in the demosponge Suberites domuncula the synthesis of the siliceous spicules starts intracellularly and is dependent on the concentration of silicic acid. To understand spicule formation, a cluster of genes was isolated. In the center of this cluster is the silicatein gene, which codes for the enzyme that synthesizes spicules. This gene is flanked by an ankyrin repeat gene at one side and by a tumor necrosis factor receptor-associated factor and a protein kinase gene at the other side. All genes are strongly expressed in primmorphs and intact animals after exposure to silicic acid, and this expression is restricted to those areas where the spicule formation starts or where spicules are maintained in the animals. Our observations suggest that in S. domuncula a coordinated expression of physically linked genes is essential for the synthesis of the major skeletal elements.


Subject(s)
Cathepsins/genetics , Enzymes/genetics , Gene Expression Regulation/physiology , Silicic Acid/pharmacology , Suberites/genetics , Animals , Base Sequence , Cathepsins/biosynthesis , Enzymes/biosynthesis , Gene Expression Regulation/drug effects , Molecular Sequence Data , Suberites/physiology , Suberites/ultrastructure
16.
J Exp Biol ; 208(Pt 4): 637-46, 2005 Feb.
Article in English | MEDLINE | ID: mdl-15695756

ABSTRACT

In Demospongiae (phylum Porifera) the formation of the siliceous skeleton, composed of spicules, is an energetically expensive reaction. The present study demonstrates that primmorphs from the demosponge Suberites domuncula express the gene for arginine kinase after exposure to exogenous silicic acid. The deduced sponge arginine kinase sequence displays the two characteristic domains of the ATP:guanido phosphotransferases; it can be grouped to the 'usual' mono-domain 40 kDa guanidino kinases (arginine kinases). Phylogenetic studies indicate that the metazoan guanidino kinases evolved from this ancestral sponge enzyme; among them are also the 'unusual' two-domain 80 kDa guanidino kinases. The high expression level of the arginine kinase gene was already measurable 1 day after addition of silicic acid by northern blot, as well as by in situ hybridization analysis. Parallel determinations of enzyme activity confirmed that high levels of arginine kinase are present in primmorphs that had been exposed for 1-5 days to silicic acid. Finally, transmission electron-microscopical studies showed that primmorphs containing high levels of arginine kinase also produce siliceous spicules. These data highlight that silicic acid is an inorganic morphogenetic factor that induces the expression of the arginine kinase, which in turn probably catalyzes the reversible transfer of high-energy phosphoryl groups.


Subject(s)
Arginine Kinase/metabolism , Evolution, Molecular , Gene Expression Regulation, Enzymologic , Phylogeny , Porifera/metabolism , Silicic Acid/metabolism , Amino Acid Sequence , Animals , Arginine Kinase/genetics , Base Sequence , Blotting, Northern , Catalysis , Cluster Analysis , DNA, Complementary/genetics , In Situ Hybridization , Microscopy, Electron, Transmission , Molecular Sequence Data , Porifera/genetics , Porifera/ultrastructure , Sequence Alignment , Sequence Analysis, DNA
17.
Immunogenetics ; 56(8): 597-610, 2004 Nov.
Article in English | MEDLINE | ID: mdl-15517243

ABSTRACT

Until recently, the lack of molecular probes hampered the determination of the expression of pro-apoptotic and anti-apoptotic genes in sponge. In an approach to solve this problem, the present study describes a variety of cDNAs from the demosponge Suberites domuncula, coding for proteins that are characteristic for the initiation of apoptosis (caspase, MA3, ALG-2 protein), for the prevention of programmed cells death (2 Bcl-2 homology proteins, FAIM-related polypeptide, and DAD-1-related protein), and for morphogenetic processes (retinoid X receptor). They were used as probes to monitor the expression levels in vitro in the allogeneic mixed sponge cell reaction (MSCR) system. In the allogeneic MSCR, two-cell aggregates (primmorphs) from genetically different animals of the same species were positioned next to each other. After approximately 8 days in culture, one of the primmorphs underwent apoptotic death, while the second remained alive. The expression levels of the aforementioned genes were determined by Northern blotting and by in situ hybridization. These experiments revealed that in the apoptotic primmorph, the characteristic apoptotic genes were expressed, while in the non-apoptotic aggregates the cell-survival genes are highly upregulated. Interestingly, the transcript levels of retinoid X receptor were higher in apoptotic primmorphs than in the non-apoptotic aggregate in the assay. Our data show for the first time that in the in vitro MSCR system, allogeneic recognition led to apoptotic cell death in one partner, while the other one survived. We suggest that this process is controlled by a differential expression of the pro-apoptotic and pro-survival genes studied here.


Subject(s)
Apoptosis , Gene Expression Profiling , Graft Rejection , Porifera/immunology , Amino Acid Sequence , Animals , Blotting, Northern , Caspases/genetics , Genes, bcl-2 , Molecular Sequence Data , Porifera/genetics , Retinoid X Receptors/genetics , Transplantation, Homologous
18.
Evid Based Complement Alternat Med ; 1(2): 133-144, 2004 Sep 01.
Article in English | MEDLINE | ID: mdl-15480439

ABSTRACT

The progress in molecular and cell biology has enabled a rational exploitation of the natural resources of the secondary metabolites and biomaterials from sponges (phylum Porifera). It could be established that these natural substances are superior for biomedical application to those obtained by the traditional combinatorial chemical approach. It is now established that the basic structural and functional elements are highly conserved from sponges to the crown taxa within the Protostomia (Drosophila melanogaster and Caenorhabditis elegans) and Deuterostomia (human); therefore, it is obvious that the molecular etiology of diseases within the metazoan animals have a common basis. Hence, the major challenge for scientists studying natural product chemistry is to elucidate the target(s) of a given secondary metabolite, which is per se highly active and selective. After this step, the potential clinical application can be approached. The potential value of some selected secondary metabolites, all obtained from sponges and their associated microorganisms, is highlighted. Examples of compounds that are already in medical use (inhibition of tumor/virus growth [arabinofuranosyl cytosine and arabinofuranosyl adenine]), or are being considered as lead structures (acting as cytostatic and anti-inflammatory secondary metabolites [avarol/avarone], causing induction of apoptosis [sorbicillactone]) or as prototypes for the interference with metabolic pathways common in organisms ranging from sponges to humans (modulation of pathways activated by fungal components [aeroplysinin], inhibition of angiogenesis [2-methylthio-1,4-napthoquinone], immune modulating activity [FK506]) are discussed in this study. In addition, bioactive proteins from sponges are listed (antibacterial activity [pore-forming protein and tachylectin]). Finally, it is outlined that the skeletal elements-the spicules-serve as blueprints for new biomaterials, especially those based on biosilica, which might be applied in biomedicine. These compounds and biomaterials have been isolated/studied by members of the German Center of Excellence BIOTECmarin. The goal for the future is to successfully introduce some of these compounds in the treatment of human diseases in order to raise the public awareness on the richness and diversity of natural products, which should be sustainably exploited for human benefit.

19.
J Mol Evol ; 59(1): 41-50, 2004 Jul.
Article in English | MEDLINE | ID: mdl-15383906

ABSTRACT

Until recently the positioning of the sponges (phylum Porifera) within the metazoan systematics was hampered by the lack of molecular evidence for the existence of junctional structures in the surface cell layers. In this study two genes related to the tight junctions are characterized from the demosponge Suberites domuncula: tetraspanin (SDTM4SF), a cell surface receptor, and MAGI (SDMAGI), a MAGUK (membrane-associated guanylate kinase homologue) protein. Especially the MAGI protein is known in other metazoan animal phyla to exist exclusively in tight junctions. The characteristic domains of MAGI proteins (six PDZ domains, two WW domains, and a truncated guanylate kinase motif) are conserved in the sponge protein. The functional analysis of SDMAGI done by in situ hybridization shows its expression in the surface epithelial layers (exopinacoderm and endopinacoderm). Northern blot studies reveal that expression of SDMAGI and SDTM4SF increases after formation of the pinacoderm layer in the animals as well as in primmorphs. These results support earlier notions that sponges contain junctional structures. We conclude that sponges contain epithelia whose cells are organized by cell junctions.


Subject(s)
Evolution, Molecular , Gene Expression , Intercellular Junctions/genetics , Membrane Proteins/genetics , Phylogeny , Porifera/genetics , Amino Acid Sequence , Animals , Base Sequence , Blotting, Northern , DNA, Complementary/genetics , Guanylate Kinases , In Situ Hybridization , Mediterranean Sea , Molecular Sequence Data , Nucleoside-Phosphate Kinase/genetics , Protein Structure, Tertiary , Sequence Alignment , Sequence Analysis, DNA
20.
Int J Dev Biol ; 48(4): 293-305, 2004 Jun.
Article in English | MEDLINE | ID: mdl-15300510

ABSTRACT

Sponges (phylum Porifera) are simple metazoans for which no molecular information on gametogenesis and larval development is available. To support the current study, it was confirmed by histology that oocytes and larvae were produced by the demosponge Suberites domuncula. Three genes/expressed products from S. domuncula whose expression correlated with sexual reproduction were identified and characterized (they are used here as marker genes): i) a receptor tyrosine kinase (RTK) with sequence similarity in the tyrosine kinase domain to fibroblast growth factor receptors; ii) the sex-determining protein FEM1 and iii) the sperm associated antigen (SAA) of triploblasts. Antibodies against the extracellular domain of the RTK specifically stained oocytes and larvae in S. domuncula tissue sections. Induction of these three genes was successful at elevated temperature, a factor which also promotes natural gametogenesis. In situ hybridization analyses revealed that FEM1 and SAA were expressed in those areas in which gametogenesis begins. Our results indicate that genes which play a role in sex determination may be present in Porifera.


Subject(s)
Suberites/cytology , Amino Acid Sequence , Animals , Antigens/genetics , Base Sequence , Biomarkers/metabolism , Cell Differentiation , DNA/genetics , Female , Gene Expression Regulation, Developmental , Male , Molecular Sequence Data , Oocytes/cytology , Oocytes/metabolism , Phylogeny , Receptor Protein-Tyrosine Kinases/genetics , Receptor Protein-Tyrosine Kinases/metabolism , Seasons , Sequence Homology, Amino Acid , Sex Determination Processes , Spermatozoa/immunology , Spermatozoa/metabolism , Suberites/genetics , Suberites/metabolism
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