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1.
Clin Neuropsychol ; 26(1): 59-73, 2012.
Article in English | MEDLINE | ID: mdl-22196481

ABSTRACT

Technological and medical advances have greatly improved survival rates for many disorders; therefore, more attention is being given to functional outcomes in individuals who have been diagnosed with neurological diseases or disorders. One example of such an endeavor consists of a cognitive rehabilitation program to improve attentional abilities. The current study uses a modification of the original Cognitive Remediation Program to address attentional deficits in children with a variety of neurological disorders. The abbreviated program is designed as a focused, time-limited program that can be easily implemented in inpatient, partial day, or outpatient medical settings using third party payment to fund the program. This article seeks to inform psychologists about how to establish a cognitive rehabilitation program with emphasis placed on providing information about insurance reimbursement and billing procedures. Information is presented regarding billing codes, materials required for reimbursement, the denial/approval process, and percent of the Usual Customary Reasonable charge that was covered. Recommendations to improve the timeliness and efficiency of the reimbursement process, as well as to increase the amount of reimbursement, are highlighted. Directions for future research, including continued documentation of the effectiveness of cognitive rehabilitation programs to establish credibility for procurement of third party payment, are also offered.


Subject(s)
Cognitive Behavioral Therapy/methods , Insurance, Health, Reimbursement , Nervous System Diseases/rehabilitation , Pediatrics , Program Evaluation , Female , Humans , Male , Rehabilitation Centers/statistics & numerical data
2.
Anal Chem ; 82(4): 1200-6, 2010 Feb 15.
Article in English | MEDLINE | ID: mdl-20073479

ABSTRACT

Presented here is an analytical method to detect residual agar from a bacterial spore sample as an indication of culturing on an agar plate. This method is based on the resolubilization of agar polysaccharide from a bacterial spore sample, enzymatic digestion, followed by electrospray ionization tandem mass spectrometry (ESI-MS(n)) analysis for detection of a specific agar fragment ion. A range of Bacillus species and strains were selected to demonstrate the effectiveness of this approach. The characteristic agar fragment ion was detected in the spores grown on agar that were washed from 1 to 5 times, irradiated or nonirradiated, and not in the spores grown in broth. A sample containing approximately 10(8) spores is currently needed for confident detection of residual agar from culture on agar plates in the presence of bacterial spores with a limit of detection of approximately 1 ppm agar spiked into a broth-grown spore sample. The results of a proficiency test with 42 blinded samples are presented demonstrating the utility of this method with no false positives and only three false negatives for samples that were below the detection level of the method as documented.


Subject(s)
Agar/analysis , Spores, Bacterial/chemistry , Agar/metabolism , Bacillus/growth & development , Bacillus/metabolism , Culture Media/chemistry , Culture Techniques , Spectrometry, Mass, Electrospray Ionization , Spores, Bacterial/metabolism
3.
Methods Mol Biol ; 492: 367-79, 2009.
Article in English | MEDLINE | ID: mdl-19241045

ABSTRACT

Matrix-assisted laser desorption/ionization-time-of-flight mass spectrometry (MALDI-TOF MS) for characterization and analysis of microorganisms, specifically bacteria, is described here as a rapid screening tool. The objective of this technique is not comprehensive protein analysis of a microorganism but rather a rapid screening of the organism and the accessible protein pattern for characterization and distinction. This method is based on the ionization of the readily accessible and easily ionizable portion of the protein profile of an organism that is often characteristic of different bacterial species. The utility of this screening approach is yet to reach its full potential but could be applied to food safety, disease outbreak monitoring in hospitals, culture stock integrity and verification, microbial forensics, or homeland security applications.


Subject(s)
Bacteria/chemistry , Bacteria/isolation & purification , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Animals , Bacillus subtilis/chemistry , Bacillus subtilis/cytology , Bacillus subtilis/isolation & purification , Bacteria/classification , Bacteria/cytology , Spores, Bacterial/chemistry
4.
Chemistry ; 14(32): 9951-9, 2008.
Article in English | MEDLINE | ID: mdl-18942695

ABSTRACT

A nanoparticle-based electrochemical immunosensor has been developed for the detection of phosphorylated acetylcholinesterase (AChE), which is a potential biomarker of exposure to organophosphate (OP) pesticides and chemical warfare nerve agents. Zirconia nanoparticles (ZrO(2) NPs) were used as selective sorbents to capture the phosphorylated AChE adduct, and quantum dots (ZnS@CdS, QDs) were used as tags to label monoclonal anti-AChE antibody to quantify the immunorecognition events. The sandwich-like immunoreactions were performed among the ZrO(2) NPs, which were pre-coated on a screen printed electrode (SPE) by electrodeposition, phosphorylated AChE and QD-anti-AChE. The captured QD tags were determined on the SPE by electrochemical stripping analysis of its metallic component (cadmium) after an acid-dissolution step. Paraoxon was used as the model OP insecticide to prepare the phosphorylated AChE adducts to demonstrate proof of principle for the sensor. The phosphorylated AChE adduct was characterized by Fourier transform infrared spectroscopy (FTIR) and mass spectroscopy. The binding affinity of anti-AChE to the phosphorylated AChE was validated with an enzyme-linked immunosorbent assay. The parameters (e.g., amount of ZrO(2) NP, QD-anti-AChE concentration,) that govern the electrochemical response of immunosensors were optimized. The voltammetric response of the immunosensor is highly linear over the range of 10 pM to 4 nM phosphorylated AChE, and the limit of detection is estimated to be 8.0 pM. The immunosensor also successfully detected phosphorylated AChE in human plasma. This new nanoparticle-based electrochemical immunosensor provides an opportunity to develop field-deployable, sensitive, and quantitative biosensors for monitoring exposure to a variety of OP pesticides and nerve agents.


Subject(s)
Acetylcholinesterase/analysis , Biomarkers/analysis , Electrochemistry/methods , Immunochemistry/methods , Nanoparticles , Organophosphorus Compounds/toxicity , Paraoxon/toxicity , Pesticides/toxicity , Acetylcholinesterase/blood , Acetylcholinesterase/chemistry , Amino Acid Sequence , Biomarkers/chemistry , Cholinesterase Inhibitors/chemistry , Humans , Insecticides/toxicity , Molecular Sequence Data , Nanoparticles/chemistry , Pesticides/chemistry , Phosphorylation , Spectroscopy, Fourier Transform Infrared
5.
Appl Environ Microbiol ; 74(11): 3573-82, 2008 Jun.
Article in English | MEDLINE | ID: mdl-18390682

ABSTRACT

In the aftermath of the 2001 anthrax letters, researchers have been exploring ways to predict the production environment of unknown-source microorganisms. Culture medium, presence of agar, culturing temperature, and drying method are just some of the broad spectrum of characteristics an investigator might like to infer. The effects of many of these factors on microorganisms are not well understood, but the complex way in which microbes interact with their environments suggests that numerous analytical techniques measuring different properties will eventually be needed for complete characterization. In this work, we present a Bayesian statistical framework for integrating disparate analytical measurements. We illustrate its application to the problem of characterizing the culture medium of Bacillus spores using three different mass spectral techniques. The results of our study suggest that integrating data in this way significantly improves the accuracy and robustness of the analyses.


Subject(s)
Bacillus anthracis/chemistry , Bacillus thuringiensis/chemistry , Chemistry Techniques, Analytical/methods , Mass Spectrometry , Spores, Bacterial/chemistry , Bayes Theorem , Culture Media/chemistry
6.
J Am Soc Mass Spectrom ; 16(4): 456-62, 2005 Apr.
Article in English | MEDLINE | ID: mdl-15792714

ABSTRACT

Bacterial analysis by matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry has been demonstrated in numerous laboratories, and a few attempts have been made to compare results from different laboratories on the same organism. It has been difficult to understand the causes behind the observed differences between laboratories when different instruments, matrices, solvents, etc. are used. In order to establish this technique as a useful tool for bacterial identification, additional efforts in standardizing the methods by which MALDI mass spectra are obtained and comparisons of spectra from different instruments with different operators are needed. Presented here is an extension of our previous single-laboratory reproducibility study with three different laboratories in a controlled experiment with aliquots of the same bacterial culture, matrix stock solution, and calibrant standards. Using automated spectral collection of whole-cell bacteria and automated data processing and analysis algorithms, fingerprints from three different laboratories were constructed and compared. Nine of the ions appeared reproducibly within all three laboratories, with additional unique ions observed within each of the laboratories. An initial evaluation of the ability to use a fingerprint generated within one laboratory for bacterial identification of a sample from another laboratory is presented, and strategies for improving identification rates between laboratories is discussed.


Subject(s)
Bacterial Proteins/analysis , Escherichia coli/chemistry , Escherichia coli/metabolism , Peptide Mapping/methods , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Laboratories , Proteome , Reproducibility of Results
7.
Appl Environ Microbiol ; 71(1): 58-64, 2005 Jan.
Article in English | MEDLINE | ID: mdl-15640170

ABSTRACT

Matrix-assisted laser desorption ionization-time-of-flight mass spectrometry (MALDI-TOF MS) has been used to identify bacteria based upon protein signatures. This research shows that while some different proteins are produced by vegetative bacteria when they are cultured in different growth media, positive identification with MALDI-TOF MS is still possible with the protocol established at the Pacific Northwest National Laboratory (K. H. Jarman, S. T. Cebula, A. J. Saenz, C. E. Petersen, N. B. Valentine, M. T. Kingsley, and K. L. Wahl, Anal. Chem. 72:1217-1223, 2000). A core set of small proteins remain constant under at least four different culture media conditions and blood agar plates, including minimal medium M9, rich media, tryptic soy broth (TSB) or Luria-Bertani (LB) broth, and blood agar plates, such that analysis of the intact cells by matrix-assisted laser desorption/ionization mass spectrometry allows for consistent identification.


Subject(s)
Bacteria/classification , Bacteria/growth & development , Bacterial Typing Techniques , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Algorithms , Bacillus subtilis/classification , Bacillus subtilis/growth & development , Bacteria/metabolism , Bacterial Proteins/metabolism , Bacteriological Techniques , Culture Media , Escherichia coli/classification , Escherichia coli/growth & development , Yersinia enterocolitica/classification , Yersinia enterocolitica/growth & development
8.
Anal Chem ; 74(24): 6191-9, 2002 Dec 15.
Article in English | MEDLINE | ID: mdl-12510738

ABSTRACT

Many different laboratories are currently developing mass-spectrometric techniques to analyze and identify microorganisms. However, minimal work has been done with mixtures of bacteria. To demonstrate that microbial mixtures could be analyzed by matrix-assisted laser desorption/ionization mass spectrometry (MALDI-MS), mixed bacterial cultures were analyzed in a double-blind fashion. Nine different bacterial species currently in our MALDI-MS fingerprint library were used to generate 50 different simulated mixed bacterial cultures similar to that done for an initial blind study previously reported (Jarman, K. H.; Cebula, S. T.; Saenz, A. J.; Petersen, C. E.; Valentine, N. B.; Kingsley, M. T.; Wahl, K. L. Anal. Chem. 2000, 72, 1217-1223). The samples were analyzed by MALDI-MS with automated data extraction and analysis algorithms developed in our laboratory. The components present in the sample were identified correctly to the species level in all but one of the samples. However, correctly eliminating closely related organisms was challenging for the current algorithms, especially in differentiating Serratia marcescens, Escherichia coli, and Yersinia enterocolitica, which have some similarities in their MALDI-MS fingerprints. Efforts to improve the specificity of the algorithms are in progress.


Subject(s)
Bacteria/classification , Bacteria/isolation & purification , Bacterial Typing Techniques/methods , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Algorithms , Automation/methods , Bacteria/genetics , Phylogeny , Sensitivity and Specificity , Species Specificity
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