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1.
bioRxiv ; 2024 Jun 06.
Article in English | MEDLINE | ID: mdl-38895273

ABSTRACT

Rationale: The role of MUC5B mucin expression in IPF pathogenesis is unknown. Bleomycin-exposed rodent models do not exhibit sustained fibrosis or airway remodeling. Unlike mice, ferrets have human-like distribution of MUC5B expressing cell types and natively express the risk-conferring variant that induces high MUC5B expression in humans. We hypothesized that ferrets would consequently exhibit aberrant repair to propagate fibrosis similar to human IPF. Methods: Bleomycin (5U/kg) or saline-control was micro-sprayed intratracheally then wild-type ferrets were evaluated through 22 wks. Clinical phenotype was assessed with lung function. Fibrosis was assessed with µCT imaging and comparative histology with Ashcroft scoring. Airway remodeling was assessed with histology and quantitative immunofluorescence. Results: Bleomycin ferrets exhibited sustained restrictive physiology including decreased inspiratory capacity, decreased compliance, and shifted Pressure-Volume loops through 22 wks. Volumetric µCT analysis revealed increased opacification of the lung bleomycin-ferrets. Histology showed extensive fibrotic injury that matured over time and MUC5B-positive cystic structures in the distal lung suggestive of honeycombing. Bleomycin ferrets had increased proportion of small airways that were double-positive for CCSP and alpha-tubulin compared to controls, indicating an aberrant 'proximalization' repair phenotype. Notably, this aberrant repair was associated with extent of fibrotic injury at the airway level. Conclusions: Bleomycin-exposed ferrets exhibit sustained fibrosis through 22 wks and have pathologic features of IPF not found in rodents. Ferrets exhibited proximalization of the distal airways and other pathologic features characteristic of human IPF. MUC5B expression through native cell types may play a key role in promoting airway remodeling and lung injury in IPF.

2.
JCI Insight ; 8(1)2023 01 10.
Article in English | MEDLINE | ID: mdl-36625345

ABSTRACT

Substantial clinical evidence supports the notion that ciliary function in the airways is important in COVID-19 pathogenesis. Although ciliary damage has been observed in both in vitro and in vivo models, the extent or nature of impairment of mucociliary transport (MCT) in in vivo models remains unknown. We hypothesize that SARS-CoV-2 infection results in MCT deficiency in the airways of golden Syrian hamsters that precedes pathological injury in lung parenchyma. Micro-optical coherence tomography was used to quantitate functional changes in the MCT apparatus. Both genomic and subgenomic viral RNA pathological and physiological changes were monitored in parallel. We show that SARS-CoV-2 infection caused a 67% decrease in MCT rate as early as 2 days postinfection (dpi) in hamsters, principally due to 79% diminished airway coverage of motile cilia. Correlating quantitation of physiological, virological, and pathological changes reveals steadily descending infection from the upper airways to lower airways to lung parenchyma within 7 dpi. Our results indicate that functional deficits of the MCT apparatus are a key aspect of COVID-19 pathogenesis, may extend viral retention, and could pose a risk factor for secondary infection. Clinically, monitoring abnormal ciliated cell function may indicate disease progression. Therapies directed toward the MCT apparatus deserve further investigation.


Subject(s)
COVID-19 , Animals , Cricetinae , COVID-19/pathology , Disease Models, Animal , Disease Progression , Lung/diagnostic imaging , Lung/pathology , Mesocricetus , Mucociliary Clearance , SARS-CoV-2 , Subgenomic RNA
3.
PLoS One ; 14(6): e0214297, 2019.
Article in English | MEDLINE | ID: mdl-31188822

ABSTRACT

Animal and plant species often face multiple threats simultaneously. We explored the relative impact of three major threats on populations of the endangered San Joaquin kit fox. This species was once widely distributed across the southern San Joaquin Valley, California, USA, but agriculture and urban development have replaced much of its natural habitat. We modeled impacts of climate change, land-use change, and rodenticide exposure on kit fox populations using a spatially explicit, individual-based population model from 2000 to 2050 for the Central Valley, California. Our study indicates that land-use change will likely have the largest impact on kit fox populations. Land development has the potential to decrease populations by approximately 15% under a compact growth scenario in which projected population increases are accommodated within existing urban areas, and 17% under a business-as-usual scenario in which future population growth increases the developed area around urban centers. Plausible scenarios for exposure to pesticides suggest a reduction in kit fox populations by approximately 13%. By contrast, climate change has the potential to ameliorate some of these impacts. Climate-change induced vegetation shifts have the potential to increase total available kit fox habitat and could drive population increases of up to 7%. These vegetation shifts could also reduce movement barriers and create opportunities for hybridization between the endangered San Joaquin kit fox and the more widely distributed desert kit fox, found in the Mojave Desert. In contrast to these beneficial impacts, increasing climate extremes raise the probability of the kit fox population dropping below critical levels. Taken together, these results paint a complex picture of how an at-risk species is likely to respond to multiple threats.


Subject(s)
Climate Change , Ecosystem , Rodenticides , Stress, Physiological , Animals , Endangered Species , Foxes , Population Dynamics , Population Growth
5.
Am J Physiol Lung Cell Mol Physiol ; 314(6): L909-L921, 2018 06 01.
Article in English | MEDLINE | ID: mdl-29493257

ABSTRACT

The respiratory tract is lined with multiciliated epithelial cells that function to move mucus and trapped particles via the mucociliary transport apparatus. Genetic and acquired ciliopathies result in diminished mucociliary clearance, contributing to disease pathogenesis. Recent innovations in imaging technology have advanced our understanding of ciliary motion in health and disease states. Application of imaging modalities including transmission electron microscopy, high-speed video microscopy, and micron-optical coherence tomography could improve diagnostics and be applied for precision medicine. In this review, we provide an overview of ciliary motion, imaging modalities, and ciliopathic diseases of the respiratory system including primary ciliary dyskinesia, cystic fibrosis, chronic obstructive pulmonary disease, and idiopathic pulmonary fibrosis.


Subject(s)
Cilia , Cystic Fibrosis , Kartagener Syndrome , Mucociliary Clearance/genetics , Pulmonary Disease, Chronic Obstructive , Animals , Cilia/genetics , Cilia/metabolism , Cilia/pathology , Cystic Fibrosis/genetics , Cystic Fibrosis/metabolism , Cystic Fibrosis/pathology , Humans , Kartagener Syndrome/genetics , Kartagener Syndrome/metabolism , Kartagener Syndrome/pathology , Pulmonary Disease, Chronic Obstructive/genetics , Pulmonary Disease, Chronic Obstructive/metabolism , Pulmonary Disease, Chronic Obstructive/pathology
6.
Cell Rep ; 16(10): 2666-2685, 2016 09 06.
Article in English | MEDLINE | ID: mdl-27568567

ABSTRACT

Human haploinsufficiency of the transcription factor Tcf4 leads to a rare autism spectrum disorder called Pitt-Hopkins syndrome (PTHS), which is associated with severe language impairment and development delay. Here, we demonstrate that Tcf4 haploinsufficient mice have deficits in social interaction, ultrasonic vocalization, prepulse inhibition, and spatial and associative learning and memory. Despite learning deficits, Tcf4(+/-) mice have enhanced long-term potentiation in the CA1 area of the hippocampus. In translationally oriented studies, we found that small-molecule HDAC inhibitors normalized hippocampal LTP and memory recall. A comprehensive set of next-generation sequencing experiments of hippocampal mRNA and methylated DNA isolated from Tcf4-deficient and WT mice before or shortly after experiential learning, with or without administration of vorinostat, identified "memory-associated" genes modulated by HDAC inhibition and dysregulated by Tcf4 haploinsufficiency. Finally, we observed that Hdac2 isoform-selective knockdown was sufficient to rescue memory deficits in Tcf4(+/-) mice.


Subject(s)
DNA Methylation/genetics , Memory , Neuronal Plasticity/genetics , Transcription Factor 7-Like 2 Protein/metabolism , Animals , Autistic Disorder/complications , Autistic Disorder/pathology , Autistic Disorder/physiopathology , CpG Islands/genetics , DNA Methylation/drug effects , Disease Models, Animal , Facies , Gene Expression Profiling , Gene Knockdown Techniques , Hippocampus/metabolism , Histone Deacetylase 2/metabolism , Histone Deacetylase Inhibitors/pharmacology , Hydroxamic Acids/pharmacology , Hyperventilation/complications , Hyperventilation/genetics , Hyperventilation/pathology , Hyperventilation/physiopathology , Intellectual Disability/complications , Intellectual Disability/genetics , Intellectual Disability/pathology , Intellectual Disability/physiopathology , Long-Term Potentiation/drug effects , Male , Memory/drug effects , Mice , Motor Activity/drug effects , Neuronal Plasticity/drug effects , Prepulse Inhibition/drug effects , Transcription Factor 7-Like 2 Protein/genetics , Transcription, Genetic/drug effects , Vorinostat
7.
PLoS One ; 10(8): e0133351, 2015.
Article in English | MEDLINE | ID: mdl-26244655

ABSTRACT

Although rodenticides are increasingly regulated, they nonetheless cause poisonings in many non-target wildlife species. Second-generation anticoagulant rodenticide use is common in agricultural and residential landscapes. Here, we use an individual-based population model to assess potential population-wide effects of rodenticide exposures on the endangered San Joaquin kit fox (Vulpes macrotis mutica). We estimate likelihood of rodenticide exposure across the species range for each land cover type based on a database of reported pesticide use and literature. Using a spatially-explicit population model, we find that 36% of modeled kit foxes are likely exposed, resulting in a 7-18% decline in the range-wide modeled kit fox population that can be linked to rodenticide use. Exposures of kit foxes in low-density developed areas accounted for 70% of the population-wide exposures to rodenticides. We conclude that exposures of non-target kit foxes could be greatly mitigated by reducing the use of second-generation anticoagulant rodenticides in low-density developed areas near vulnerable populations.


Subject(s)
Agriculture , Anticoagulants/poisoning , Environmental Exposure , Foxes , Rodenticides/poisoning , Animals , Models, Theoretical
8.
PLoS Genet ; 11(6): e1005290, 2015 Jun.
Article in English | MEDLINE | ID: mdl-26115514

ABSTRACT

Neurons are particularly vulnerable to perturbations in endo-lysosomal transport, as several neurological disorders are caused by a primary deficit in this pathway. In this report, we used positional cloning to show that the spontaneously occurring neurological mutation teetering (tn) is a single nucleotide substitution in hepatocyte growth factor-regulated tyrosine kinase substrate (Hgs/Hrs), a component of the endosomal sorting complex required for transport (ESCRT). The tn mice exhibit hypokenesis, muscle weakness, reduced muscle size and early perinatal lethality by 5-weeks of age. Although HGS has been suggested to be essential for the sorting of ubiquitinated membrane proteins to the lysosome, there were no alterations in receptor tyrosine kinase levels in the central nervous system, and only a modest decrease in tropomyosin receptor kinase B (TrkB) in the sciatic nerves of the tn mice. Instead, loss of HGS resulted in structural alterations at the neuromuscular junction (NMJ), including swellings and ultra-terminal sprouting at motor axon terminals and an increase in the number of endosomes and multivesicular bodies. These structural changes were accompanied by a reduction in spontaneous and evoked release of acetylcholine, indicating a deficit in neurotransmitter release at the NMJ. These deficits in synaptic transmission were associated with elevated levels of ubiquitinated proteins in the synaptosome fraction. In addition to the deficits in neuronal function, mutation of Hgs resulted in both hypermyelinated and dysmyelinated axons in the tn mice, which supports a growing body of evidence that ESCRTs are required for proper myelination of peripheral nerves. Our results indicate that HGS has multiple roles in the nervous system and demonstrate a previously unanticipated requirement for ESCRTs in the maintenance of synaptic transmission.


Subject(s)
Endosomal Sorting Complexes Required for Transport/genetics , Gene Expression Regulation, Developmental , Mutation , Phosphoproteins/genetics , Amino Acid Sequence , Animals , Behavior, Animal/physiology , Endosomal Sorting Complexes Required for Transport/metabolism , Female , Hippocampus/pathology , Male , Mice, Inbred C57BL , Mice, Mutant Strains , Molecular Sequence Data , Motor Activity/genetics , Myelin Sheath/genetics , Myelin Sheath/metabolism , Neuromuscular Junction/genetics , Neuromuscular Junction/physiopathology , Phosphoproteins/metabolism , Sciatic Nerve/metabolism , Sciatic Nerve/physiopathology , Synaptic Transmission/genetics
9.
Mol Neurodegener ; 10: 3, 2015 Jan 10.
Article in English | MEDLINE | ID: mdl-25575639

ABSTRACT

BACKGROUND: Ubiquitin-specific protease 14 (USP14) is one of three proteasome-associated deubiquitinating enzymes that remove ubiquitin from proteasomal substrates prior to their degradation. In vitro evidence suggests that inhibiting USP14's catalytic activity alters the turnover of ubiquitinated proteins by the proteasome, although whether protein degradation is accelerated or delayed seems to be cell-type and substrate specific. For example, combined inhibition of USP14 and the proteasomal deubiquitinating enzyme UCH37 halts protein degradation and promotes apoptosis in multiple myeloma cells, whereas USP14 inhibition alone accelerates the degradation of aggregate-prone proteins in immortalized cell lines. These findings have prompted interest in USP14 as a therapeutic target both inside and outside of the nervous system. However, loss of USP14 in the spontaneously occurring ataxia mouse mutant leads to a dramatic neuromuscular phenotype and early perinatal lethality, suggesting that USP14 inhibition may have adverse consequences in the nervous system. We therefore expressed a catalytically inactive USP14 mutant in the mouse nervous system to determine whether USP14's catalytic activity is required for neuromuscular junction (NMJ) structure and function. RESULTS: Mice expressing catalytically inactive USP14 in the nervous system exhibited motor deficits, altered NMJ structure, and synaptic transmission deficits that were similar to what is observed in the USP14-deficient ataxia mice. Acute pharmacological inhibition of USP14 in wild type mice also reduced NMJ synaptic transmission. However, there was no evidence of altered proteasome activity when USP14 was inhibited either genetically or pharmacologically. Instead, these manipulations increased the levels of non-proteasome targeting ubiquitin conjugates. Specifically, we observed enhanced proteasome-independent ubiquitination of mixed lineage kinase 3 (MLK3). Consistent with the direct activation of MLK3 by ubiquitination, we also observed increased activation of its downstrea targets MAP kinase kinase 4 (MKK4) and c-Jun N-terminal kinase (JNK). In vivo inhibition of JNK improved motor function and synapse structure in the USP14 catalytic mutant mice. CONCLUSIONS: USP14's catalytic activity is required for nervous system structure and function and has an ongoing role in NMJ synaptic transmission. By regulating the ubiquitination status of protein kinases, USP14 can coordinate the activity of intracellular signaling pathways that control the development and activity of the NMJ.


Subject(s)
JNK Mitogen-Activated Protein Kinases/physiology , Nerve Tissue Proteins/physiology , Neuromuscular Junction/physiopathology , Signal Transduction/physiology , Ubiquitin Thiolesterase/physiology , Animals , Anthracenes/pharmacology , Ataxia/genetics , Ataxia/pathology , Ataxia/physiopathology , Catalysis , Cells, Cultured , Cerebral Cortex/cytology , Exploratory Behavior , Female , Hand Strength , Male , Mice , Mice, Inbred C57BL , Mice, Neurologic Mutants , Mice, Transgenic , Mutagenesis, Site-Directed , Nerve Tissue Proteins/antagonists & inhibitors , Nerve Tissue Proteins/deficiency , Nerve Tissue Proteins/genetics , Neuromuscular Junction/ultrastructure , Neurons/drug effects , Proteasome Endopeptidase Complex , Protein Processing, Post-Translational , Proteolysis , Pyrroles/pharmacology , Pyrrolidines/pharmacology , Rotarod Performance Test , Signal Transduction/genetics , Transgenes , Ubiquitin Thiolesterase/antagonists & inhibitors , Ubiquitin Thiolesterase/deficiency , Ubiquitin Thiolesterase/genetics , Ubiquitination
10.
PLoS One ; 8(12): e84042, 2013.
Article in English | MEDLINE | ID: mdl-24358326

ABSTRACT

In this study, we identified and characterized an N-ethyl-N-nitrosourea (ENU) induced mutation in Usp14 (nmf375) that leads to adult-onset neurological disease. The nmf375 mutation causes aberrant splicing of Usp14 mRNA, resulting in a 95% reduction in USP14. We previously showed that loss of USP14 in ataxia (ax (J)) mice results in reduced ubiquitin levels, motor endplate disease, Purkinje cell axonal dystrophy and decreased hippocampal paired pulse facilitation (PPF) during the first 4-6 weeks of life, and early postnatal lethality by two months of age. Although the loss of USP14 is comparable between the nmf375 and ax (J) mice, the nmf375 mice did not exhibit these ax (J) developmental abnormalities. However, by 12 weeks of age the nmf375 mutants present with ubiquitin depletion and motor endplate disease, indicating a continual role for USP14-mediated regulation of ubiquitin pools and neuromuscular junction (NMJ) structure in adult mice. The observation that motor endplate disease was only seen after ubiquitin depletion suggests that the preservation of NMJ structure requires the stable maintenance of synaptic ubiquitin pools. Differences in genetic background were shown to affect ubiquitin expression and dramatically alter the phenotypes caused by USP14 deficiency.


Subject(s)
Neuromuscular Diseases/enzymology , Neuromuscular Diseases/genetics , Ubiquitin Thiolesterase/deficiency , Alternative Splicing , Animals , Axons/pathology , Base Sequence , Chromosome Mapping , Disease Models, Animal , Gene Expression , Hippocampus/metabolism , Homeostasis/genetics , Humans , Mice , Motor Endplate/metabolism , Motor Endplate/pathology , Muscle Fibers, Skeletal/metabolism , Muscle Fibers, Skeletal/pathology , Mutation , Neuromuscular Diseases/mortality , Neuromuscular Junction/metabolism , Neuromuscular Junction/pathology , Neuronal Plasticity , Phenotype , Protein Subunits/genetics , Purkinje Cells/cytology , Purkinje Cells/metabolism , RNA, Messenger/chemistry , RNA, Messenger/genetics , Receptors, Cholinergic/chemistry , Receptors, Cholinergic/genetics , Severity of Illness Index , Synapses/metabolism , Ubiquitin/genetics , Ubiquitin/metabolism , Ubiquitin Thiolesterase/genetics
11.
PLoS One ; 7(10): e47884, 2012.
Article in English | MEDLINE | ID: mdl-23144711

ABSTRACT

Regulated protein degradation by the proteasome plays an essential role in the enhancement and suppression of signaling pathways in the nervous system. Proteasome-associated factors are pivotal in ensuring appropriate protein degradation, and we have previously demonstrated that alterations in one of these factors, the proteasomal deubiquitinating enzyme ubiquitin-specific protease 14 (Usp14), can lead to proteasome dysfunction and neurological disease. Recent studies in cell culture have shown that Usp14 can also stabilize the expression of over-expressed, disease-associated proteins such as tau and ataxin-3. Using Usp14-deficient ax(J) mice, we investigated if loss of Usp14 results in decreased levels of endogenous tau and ataxin-3 in the nervous system of mice. Although loss of Usp14 did not alter the overall neuronal levels of tau and ataxin-3, we found increased levels of phosphorylated tau that correlated with the onset of axonal varicosities in the Usp14-deficient mice. These changes in tau phosphorylation were accompanied by increased levels of activated phospho-Akt, phosphorylated MAPKs, and inactivated phospho-GSK3ß. However, genetic ablation of tau did not alter any of the neurological deficits in the Usp14-deficient mice, demonstrating that increased levels of phosphorylated tau do not necessarily lead to neurological disease. Due to the widespread activation of intracellular signaling pathways induced by the loss of Usp14, a better understanding of the cellular pathways regulated by the proteasome is required before effective proteasomal-based therapies can be used to treat chronic neurological diseases.


Subject(s)
Neurons/metabolism , Tauopathies/metabolism , Ubiquitin Thiolesterase/deficiency , tau Proteins/metabolism , Animals , Ataxin-3 , Brain/metabolism , Brain/pathology , Cerebellum/metabolism , Cerebellum/pathology , Cerebellum/ultrastructure , Excitatory Postsynaptic Potentials , Fluorescent Antibody Technique, Indirect , Glycogen Synthase Kinase 3/metabolism , Glycogen Synthase Kinase 3 beta , Hippocampus/metabolism , Hippocampus/pathology , Hippocampus/physiopathology , Immunoblotting , Mice , Mice, Inbred C57BL , Mice, Knockout , Microscopy, Electron , Mitogen-Activated Protein Kinases/metabolism , Neurons/pathology , Nuclear Proteins/genetics , Nuclear Proteins/metabolism , Phosphorylation , Proteolysis , Proto-Oncogene Proteins c-akt/metabolism , Purkinje Cells/metabolism , Purkinje Cells/pathology , Survival Analysis , Tauopathies/genetics , Tauopathies/pathology , Transcription Factors/genetics , Transcription Factors/metabolism , Ubiquitin Thiolesterase/genetics , tau Proteins/genetics
12.
Mol Ecol ; 21(24): 5918-33, 2012 Dec.
Article in English | MEDLINE | ID: mdl-23106496

ABSTRACT

Identifying historic patterns of population genetic diversity and connectivity is a primary challenge in efforts to re-establish the processes that have generated and maintained genetic variation across natural landscapes. The challenge of reconstructing pattern and process is even greater in highly altered landscapes where population extinctions and dramatic demographic fluctuations in remnant populations may have substantially altered, if not eliminated, historic patterns. Here, we seek to reconstruct historic patterns of diversity and connectivity in an endangered subspecies of woodrat that now occupies only 1-2 remnant locations within the highly altered landscape of the Great Central Valley of California. We examine patterns of diversity and connectivity using 14 microsatellite loci and sequence data from a mitochondrial locus and a nuclear intron. We reconstruct temporal change in habitat availability to establish several historical scenarios that could have led to contemporary patterns of diversity, and use an approximate Bayesian computation approach to test which of these scenarios is most consistent with our observed data. We find that the Central Valley populations harbour unique genetic variation coupled with a history of admixture between two well-differentiated species of woodrats that are currently restricted to the woodlands flanking the Valley. Our simulations also show that certain commonly used analytical approaches may fail to recover a history of admixture when populations experience severe bottlenecks subsequent to hybridization. Overall our study shows the strength of combining empirical and simulation analyses to recover the history of populations occupying highly altered landscapes.


Subject(s)
Endangered Species , Evolution, Molecular , Genetics, Population , Phylogeny , Sigmodontinae/genetics , Alleles , Animals , Bayes Theorem , California , Cell Nucleus/genetics , Computer Simulation , DNA, Mitochondrial/genetics , Ecosystem , Genetic Variation , Geography , Likelihood Functions , Microsatellite Repeats , Molecular Sequence Data , Sequence Analysis, DNA
13.
Traffic ; 11(12): 1567-78, 2010 Dec.
Article in English | MEDLINE | ID: mdl-21029287

ABSTRACT

Drosophila temperature-sensitive rolling blackout (rbo(ts) ) mutants display a total block of endocytosis in non-neuronal cells and a weaker, partial defect at neuronal synapses. RBO is an integral plasma membrane protein and is predicted to be a serine esterase. To determine if lipase activity is required for RBO function, we mutated the catalytic serine 358 to alanine in the G-X-S-X-G active site, and assayed genomic rescue of rbo mutant non-neuronal and neuronal phenotypes. The rbo(S358A) mutant is unable to rescue rbo null 100% embryonic lethality, indicating that the lipase domain is critical for RBO essential function. Likewise, the rbo(S358A) mutant cannot provide any rescue of endocytic blockade in rbo(ts) Garland cells, showing that the lipase domain is indispensable for non-neuronal endocytosis. In contrast, rbo(ts) conditional paralysis, synaptic transmission block and synapse endocytic defects are all fully rescued by the rbo(S358A) mutant, showing that the RBO lipase domain is dispensable in neuronal contexts. We identified a synthetic lethal interaction between rbo(ts) and the well-characterized dynamin GTPase conditional shibire (shi(ts1)) mutant. In both non-neuronal cells and neuronal synapses, shi(ts1); rbo(ts) phenocopies shi(ts1) endocytic defects, indicating that dynamin and RBO act in the same pathway, with dynamin functioning upstream of RBO. We conclude that RBO possesses both lipase domain-dependent and scaffolding functions with differential requirements in non-neuronal versus neuronal endocytosis mechanisms downstream of dynamin GTPase activity.


Subject(s)
Carboxylic Ester Hydrolases/metabolism , Drosophila Proteins/metabolism , Drosophila melanogaster/physiology , Dynamins/metabolism , Endocytosis/physiology , Lipase/metabolism , Animals , Carboxylic Ester Hydrolases/genetics , Catalytic Domain/genetics , Drosophila Proteins/genetics , Drosophila melanogaster/enzymology , Drosophila melanogaster/genetics , Endocytosis/genetics , Female , Genes, Lethal , Lipase/genetics , Male , Protein Structure, Tertiary , Synapses/enzymology , Synapses/genetics
14.
J Neurosci ; 28(26): 6569-82, 2008 Jun 25.
Article in English | MEDLINE | ID: mdl-18579730

ABSTRACT

The mistrafficking and consequent cytoplasmic accumulation of cholesterol and sphingolipids is linked to multiple neurodegenerative diseases. One class of disease, the sphingolipid storage diseases, includes Niemann-Pick disease type C (NPC), caused predominantly (95%) by mutation of the NPC1 gene. A disease model has been established through mutation of Drosophila NPC1a (dnpc1a). Null mutants display early lethality attributable to loss of cholesterol-dependent ecdysone steroid hormone production. Null mutants rescued to adults by restoring ecdysone production mimic human NPC patients with progressive motor defects and reduced life spans. Analysis of dnpc1a null brains shows elevated overall cholesterol levels and progressive accumulation of filipin-positive cholesterol aggregates within brain and retina, as well as isolated cultured brain neurons. Ultrastructural imaging of dnpc1a mutant brains reveals age-progressive accumulation of striking multilamellar and multivesicular organelles, preceding the onset of neurodegeneration. Consistently, electroretinogram recordings show age-progressive loss of phototransduction and photoreceptor synaptic transmission. Early lethality, movement impairments, neuronal cholesterol deposits, accumulation of multilamellar bodies, and age-dependent neurodegeneration are all rescued by targeted neuronal expression of a wild-type dnpc1a transgene. Interestingly, targeted expression of dnpc1a in glia also provides limited rescue of adult lethality. Generation of dnpc1a null mutant neuron clones in the brain reveals cell-autonomous requirements for dNPC1a in cholesterol and membrane trafficking. These data demonstrate a requirement for dNPC1a in the maintenance of neuronal function and viability and show that loss of dNPC1a in neurons mimics the human neurodegenerative condition.


Subject(s)
Aging/metabolism , Brain/metabolism , Cholesterol/metabolism , Drosophila Proteins/genetics , Membrane Proteins/genetics , Nerve Degeneration/metabolism , Neurons/metabolism , Aging/genetics , Animals , Biological Transport, Active/genetics , Brain/pathology , Brain/physiopathology , Cell Survival/genetics , Cells, Cultured , Disease Models, Animal , Drosophila melanogaster , Filipin/metabolism , Gene Expression Regulation, Developmental/genetics , Genes, Lethal/genetics , Inclusion Bodies/genetics , Inclusion Bodies/metabolism , Inclusion Bodies/pathology , Intracellular Membranes/metabolism , Mice , Mutation/genetics , Nerve Degeneration/genetics , Nerve Degeneration/physiopathology , Neurons/pathology , Niemann-Pick C1 Protein , Niemann-Pick Diseases/genetics , Niemann-Pick Diseases/metabolism , Niemann-Pick Diseases/physiopathology , Organelles/genetics , Organelles/metabolism , Organelles/pathology , Photoreceptor Cells, Invertebrate/metabolism , Photoreceptor Cells, Invertebrate/pathology , Retinal Diseases/genetics , Retinal Diseases/metabolism , Retinal Diseases/physiopathology
15.
J Lipid Res ; 48(8): 1857-72, 2007 Aug.
Article in English | MEDLINE | ID: mdl-17525475

ABSTRACT

Phosphatidylinositol transfer proteins (PITPs) bind phosphatidylinositol (PtdIns) and phosphatidylcholine and play diverse roles in coordinating lipid metabolism/signaling with intracellular functions. The underlying mechanisms remain unclear. Genetic ablation of PITPalpha in mice results in neonatal lethality characterized by intestinal and hepatic steatosis, spinocerebellar neurodegeneration, and glucose homeostatic defects. We report that mice expressing a PITPalpha selectively ablated for PtdIns binding activity (Pitpalpha(T59D)), as the sole source of PITPalpha, exhibit phenotypes that recapitulate those of authentic PITPalpha nullizygotes. Analyses of mice with graded reductions in PITPalpha activity reveal proportionately graded reductions in lifespan, demonstrate that intestinal steatosis and hypoglycemia are apparent only when PITPalpha protein levels are strongly reduced (>or=90%), and correlate steatotic and glucose homeostatic defects with cerebellar inflammatory disease. Finally, reconstitution of PITPalpha expression in the small intestine substantially corrects the chylomicron retention disease and cerebellar inflammation of Pitpalpha(0/0) neonates, but does not rescue neonatal lethality in these animals. These data demonstrate that PtdIns binding is an essential functional property of PITPalpha in vivo, and suggest a causal linkage between defects in lipid transport and glucose homeostasis and cerebellar inflammatory disease. Finally, the data also demonstrate intrinsic neuronal deficits in PITPalpha-deficient mice that are independent of intestinal lipid transport defects and hypoglycemia.


Subject(s)
Phospholipid Transfer Proteins/metabolism , Alleles , Animals , Binding Sites , Cerebellar Diseases/metabolism , Cerebellar Diseases/pathology , Cerebellum/metabolism , Fatty Liver/metabolism , Fatty Liver/pathology , Female , Glucose/metabolism , Intestinal Diseases/metabolism , Intestinal Diseases/pathology , Intestine, Small/metabolism , Intestine, Small/pathology , Male , Mice , Mice, Inbred Strains , Models, Genetic , Neurodegenerative Diseases/metabolism , Neurodegenerative Diseases/pathology , Phenotype , Phosphatidylinositols/metabolism , Phospholipid Transfer Proteins/genetics , Synaptic Transmission
16.
Mol Biol Cell ; 18(5): 1928-42, 2007 May.
Article in English | MEDLINE | ID: mdl-17344474

ABSTRACT

Molecular dynamics simulations coupled with functional analyses of the major yeast phosphatidylinositol/phosphatidylcholine transfer protein Sec14p identify structural elements involved in regulating the ability of Sec14p to execute phospholipid exchange. The molecular dynamics simulations suggest large rigid body motions within the Sec14p molecule accompany closing and opening of an A(10)/T(4)/A(11) helical gate, and that "state-of-closure" of this helical gate determines access to the Sec14p phospholipid binding cavity. The data also project that conformational dynamics of the helical gate are controlled by a hinge unit (residues F(212), Y(213), K(239), I(240), and I(242)) that links to the N- and C-terminal ends of the helical gate, and by a novel gating module (composed of the B(1)LB(2) and A(12)LT(5) substructures) through which conformational information is transduced to the hinge. The (114)TDKDGR(119) motif of B(1)LB(2) plays an important role in that transduction process. These simulations offer new mechanistic possibilities for an important half-reaction of the Sec14p phospholipid exchange cycle that occurs on membrane surfaces after Sec14p has ejected bound ligand, and is reloading with another phospholipid molecule. These conformational transitions further suggest structural rationales for known disease missense mutations that functionally compromise mammalian members of the Sec14-protein superfamily.


Subject(s)
Phospholipid Transfer Proteins/chemistry , Phospholipid Transfer Proteins/metabolism , Saccharomyces cerevisiae Proteins/chemistry , Saccharomyces cerevisiae Proteins/metabolism , Amino Acid Motifs , Amino Acid Sequence , Animals , Binding Sites , Carrier Proteins/chemistry , Carrier Proteins/genetics , Carrier Proteins/metabolism , Crystallography, X-Ray , Humans , Models, Molecular , Molecular Sequence Data , Mutagenesis, Site-Directed , Phospholipid Transfer Proteins/genetics , Protein Conformation , Protein Structure, Secondary , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/metabolism , Saccharomyces cerevisiae Proteins/genetics , Sequence Homology, Amino Acid , Thermodynamics
17.
Mol Biol Cell ; 17(6): 2498-512, 2006 Jun.
Article in English | MEDLINE | ID: mdl-16540520

ABSTRACT

Phosphatidylinositol transfer proteins (PITPs) regulate the interface between lipid metabolism and specific steps in membrane trafficking through the secretory pathway in eukaryotes. Herein, we describe the cis-acting information that controls PITPbeta localization in mammalian cells. We demonstrate PITPbeta localizes predominantly to the trans-Golgi network (TGN) and that this localization is independent of the phospholipid-bound state of PITPbeta. Domain mapping analyses show the targeting information within PITPbeta consists of three short C-terminal specificity elements and a nonspecific membrane-binding element defined by a small motif consisting of adjacent tryptophan residues (the W(202)W(203) motif). Combination of the specificity elements with the W(202)W(203) motif is necessary and sufficient to generate an efficient TGN-targeting module. Finally, we demonstrate that PITPbeta association with the TGN is tolerant to a range of missense mutations at residue serine 262, we describe the TGN localization of a novel PITPbeta isoform with a naturally occurring S262Q polymorphism, and we find no other genetic or pharmacological evidence to support the concept that PITPbeta localization to the TGN is obligately regulated by conventional protein kinase C (PKC) or the Golgi-localized PKC isoforms delta or epsilon. These latter findings are at odds with a previous report that conventional PKC-mediated phosphorylation of residue Ser262 is required for PITPbeta targeting to Golgi membranes.


Subject(s)
Phospholipid Transfer Proteins/metabolism , trans-Golgi Network/metabolism , Amino Acid Sequence , Animals , COS Cells , Cell Line , Chlorocebus aethiops , Genes, Reporter , Green Fluorescent Proteins/metabolism , Mice , Molecular Sequence Data , Phospholipid Transfer Proteins/chemistry , Phospholipid Transfer Proteins/genetics , Protein Transport , Transfection
18.
Crit Rev Biochem Mol Biol ; 41(1): 21-49, 2006.
Article in English | MEDLINE | ID: mdl-16455519

ABSTRACT

Phosphatidylinositol/phosphatidylcholine transfer proteins (PITPs) remain largely functionally uncharacterized, despite the fact that they are highly conserved and are found in all eukaryotic cells thus far examined by biochemical or sequence analysis approaches. The available data indicate a role for PITPs in regulating specific interfaces between lipid-signaling and cellular function. In this regard, a role for PITPs in controlling specific membrane trafficking events is emerging as a common functional theme. However, the mechanisms by which PITPs regulate lipid-signaling and membrane-trafficking functions remain unresolved. Specific PITP dysfunctions are now linked to neurodegenerative and intestinal malabsorption diseases in mammals, to stress response and developmental regulation in higher plants, and to previously uncharacterized pathways for regulating membrane trafficking in yeast and higher eukaryotes, making it clear that PITPs are integral parts of a highly conserved signal transduction strategy in eukaryotes. Herein, we review recent progress in deciphering the biological functions of PITPs, and discuss some of the open questions that remain.


Subject(s)
Eukaryotic Cells/metabolism , Phosphatidylinositols/metabolism , Phospholipid Transfer Proteins/metabolism , Animals , Arabidopsis/metabolism , Models, Molecular , Phospholipid Transfer Proteins/chemistry , Phospholipid Transfer Proteins/genetics , Saccharomyces cerevisiae Proteins/chemistry , Saccharomyces cerevisiae Proteins/genetics , Saccharomyces cerevisiae Proteins/metabolism
20.
J Biol Chem ; 278(35): 33501-18, 2003 Aug 29.
Article in English | MEDLINE | ID: mdl-12788952

ABSTRACT

Phosphatidylinositol transfer proteins (PITPs) regulate the interface between lipid metabolism and cellular functions. We now report that ablation of PITP alpha function leads to aponecrotic spinocerebellar disease, hypoglycemia, and intestinal and hepatic steatosis in mice. The data indicate that hypoglycemia is in part associated with reduced proglucagon gene expression and glycogenolysis that result from pancreatic islet cell defects. The intestinal and hepatic steatosis results from the intracellular accumulation of neutral lipid and free fatty acid mass in these organs and suggests defective trafficking of triglycerides and diacylglycerols from the endoplasmic reticulum. We propose that deranged intestinal and hepatic lipid metabolism and defective proglucagon gene expression contribute to hypoglycemia in PITP alpha-/- mice, and that hypoglycemia is a significant contributing factor in the onset of spinocerebellar disease. Taken together, the data suggest an unanticipated role for PITP alpha in with glucose homeostasis and in mammalian endoplasmic reticulum functions that interface with transport of specific luminal lipid cargoes.


Subject(s)
Carrier Proteins/genetics , Carrier Proteins/physiology , Hypoglycemia/genetics , Intestinal Diseases/genetics , Liver Diseases/genetics , Membrane Proteins/genetics , Membrane Proteins/physiology , Saccharomyces cerevisiae Proteins , Spinocerebellar Degenerations/genetics , Adenosine Triphosphate/metabolism , Animals , Brain/embryology , Brain/metabolism , Cerebellum/metabolism , Dose-Response Relationship, Drug , Endoplasmic Reticulum/metabolism , Fatty Acids/metabolism , Genetic Vectors , Genotype , Glucagon/biosynthesis , Glucagon/metabolism , Glycogen/metabolism , Hypoglycemia/metabolism , In Situ Nick-End Labeling , Lipid Metabolism , Liver/metabolism , Mice , Mice, Inbred C57BL , Mice, Transgenic , Microscopy, Electron , Models, Genetic , Phenotype , Phospholipid Transfer Proteins , Proglucagon , Protein Precursors/biosynthesis , Protein Precursors/metabolism , Time Factors
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