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1.
Carbohydr Res ; 343(16): 2754-62, 2008 Nov 03.
Article in English | MEDLINE | ID: mdl-18565500

ABSTRACT

Mutations of the tryptophan residues in the tryptophan-track of the N-terminal domain (W33F/Y and W69F/Y) and in the catalytic domain (W245F/Y) of Serratia sp. TU09 Chitinase 60 (CHI60) were constructed, as single and double point substitutions to either phenylalanine or tyrosine. The enzyme-substrate interaction and mode of catalysis, exo/endo-type, of wild type CHI60 and mutant enzymes on soluble (partially N-acetylated chitin), amorphous (colloidal chitin), and crystalline (ß-chitin) substrates were studied. All CHI60 mutants exhibited a reduced substrate binding activity on colloidal chitin. CHI60 possesses a dual mode of catalysis with both exo- and endo-type activities allowing the enzyme to work efficiently on various substrate types. CHI60 preferentially uses the endo-type mode on soluble and amorphous substrates and the exo-type mode on crystalline substrate. However, the prevalent mode of hydrolysis mediated by CHI60 is regulated by ionic strength. Slightly elevated ionic strength, 0.1-0.2M NaCl, which promotes enzyme-substrate interactions, enhances CHI60 hydrolytic activity on amorphous substrate and, interestingly, on partially N-acetylated chitin. High ionic strength, 0.5-2.0M NaCl, prevents the enzyme from dissociating from amorphous substrate, occupying the enzyme in an enzyme-substrate non-productive complex. However, on crystalline substrates, the activity of CHI60 was only inhibited approximately 50% at high ionic strength, suggesting that the enzyme hydrolyzes crystalline substrates with an exo-type mode processively while remaining tightly bound to the substrate. Moreover, substitution of Trp-33 to either phenylalanine or tyrosine reduced the activity of the enzyme at high ionic strength, suggesting an important role of Trp-33 on enzyme processivity.


Subject(s)
Chitinases/antagonists & inhibitors , Serratia/enzymology , Sodium Chloride/pharmacology , Biocatalysis , Chitinases/genetics , Chitinases/metabolism , Dose-Response Relationship, Drug , Hydrolysis , Models, Molecular , Mutagenesis, Site-Directed , Osmolar Concentration , Sodium Chloride/chemistry , Structure-Activity Relationship
2.
Virology ; 259(1): 20-33, 1999 Jun 20.
Article in English | MEDLINE | ID: mdl-10364486

ABSTRACT

The herpes simplex virus (HSV) transactivator VP16 is a structural component of the virion that activates immediate-early viral gene expression. The HSV-1 mutant in1814, which contains a 12-bp insertion that compromises the transcriptional function of VP16, replicated to a low level if at all in the trigeminal ganglia of mice (I. Steiner, J. G. Spivack, S. L. Deshmane, C. I. Ace, C. M. Preston, and N. W. Fraser (1990). J. Virol. 64, 1630-1638; Valyi-Nagy et al., unpublished data). However, in1814 did establish a latent infection in the ganglia after corneal inoculation from which it could be reactivated. In this study, several HSV-1 strains were constructed with deletions in the VP16 transcriptional activation domain. These viruses were viable in cell culture, although some were significantly reduced in their ability to initiate infection. A deletion mutant completely lacking the activation domain of VP16 (RP5) was unable to replicate to any detectable level or to efficiently establish latent infections in the peripheral and central nervous systems of immunocompetent mice. However, similar to in1814, RP5 formed a slowly progressing persistent infection in immunocompromised nude mice. Thus RP5 is severely neuroattenuated in the murine model of HSV infection. However, the activation domain of VP16 is not essential for replication in the nervous system, since we observed a slow progressive infection persisting in the absence of an immune response.


Subject(s)
Central Nervous System/virology , Herpes Simplex Virus Protein Vmw65/genetics , Herpes Simplex/virology , Herpesvirus 1, Human/physiology , Peripheral Nervous System/virology , Virus Latency/genetics , Animals , Female , Gene Expression Regulation, Viral/physiology , Herpes Simplex/physiopathology , Mice , Mice, Inbred BALB C , Mice, Inbred C57BL , Mice, Nude , Transcriptional Activation
3.
Proc Natl Acad Sci U S A ; 92(20): 9333-7, 1995 Sep 26.
Article in English | MEDLINE | ID: mdl-7568128

ABSTRACT

Varicella-zoster virus open reading frame 10 (ORF10) protein, the homolog of the herpes simplex virus protein VP16, can transactivate immediate-early promoters from both viruses. A protein sequence comparison procedure termed hydrophobic cluster analysis was used to identify a motif centered at Phe-28, near the amino terminus of ORF10, that strongly resembles the sequence of the activating domain surrounding Phe-442 of VP16. With a series of GAL4-ORF10 fusion proteins, we mapped the ORF10 transcriptional-activation domain to the amino-terminal region (aa 5-79). Extensive mutagenesis of Phe-28 in GAL4-ORF10 fusion proteins demonstrated the importance of an aromatic or bulky hydrophobic amino acid at this position, as shown previously for Phe-442 of VP16. Transactivation by the native ORF10 protein was abolished when Phe-28 was replaced by Ala. Similar amino-terminal domains were identified in the VP16 homologs of other alphaherpesviruses. Hydrophobic cluster analysis correctly predicted activation domains of ORF10 and VP16 that share critical characteristics of a distinctive subclass of acidic activation domains.


Subject(s)
Herpesvirus 3, Human/genetics , Herpesvirus 3, Human/metabolism , Open Reading Frames , Saccharomyces cerevisiae Proteins , Trans-Activators/biosynthesis , Trans-Activators/chemistry , Transcription Factors , Transcriptional Activation , Amino Acid Sequence , Animals , Cell Line , Chloramphenicol O-Acetyltransferase/biosynthesis , Chlorocebus aethiops , DNA-Binding Proteins , Fungal Proteins/biosynthesis , Herpes Simplex Virus Protein Vmw65/chemistry , Molecular Sequence Data , Mutagenesis, Site-Directed , Phenylalanine , Protein Conformation , Recombinant Fusion Proteins/biosynthesis , Sequence Homology, Amino Acid , Trans-Activators/genetics , Transfection , Vero Cells , Viral Proteins/biosynthesis
4.
J Virol ; 68(5): 2803-10, 1994 May.
Article in English | MEDLINE | ID: mdl-7512152

ABSTRACT

Lesions resulting from recurrent genital herpes simplex virus (HSV) infection are characterized by infiltration of CD4+ lymphocytes. We have investigated the antigenic specificity of 47 HSV-specific CD4+ T-cell clones recovered from the HSV-2 buttock and thigh lesions of five patients. Clones with proliferative responses to recombinant truncated glycoprotein B (gB) or gD of HSV-2 or purified natural gC of HSV-2 comprised a minority of the total number of HSV-specific clones isolated from lesions. The gC2- and gD2-specific CD4+ clones had cytotoxic activity. The approximate locations of the HSV-2 genes encoding HSV-2 type-specific CD4+ antigens have been determined by using HSV-1 x HSV-2 intertypic recombinant virus and include the approximate map regions 0.30 to 0.46, 0.59 to 0.67, 0.67 to 0.73, and 0.82 to 1.0 units. The antigenic specificity of an HLA DQ2-restricted, HSV-2 type-specific T-cell clone was mapped to amino acids 425 to 444 of VP16 of HSV-2 by sequential use of an intertypic recombinant virus containing VP16 of HSV-2 in an HSV-1 background, recombinant VP16 fusion proteins, and synthetic peptides. Each of the remaining four patients also yielded at least one type-specific T-cell clone reactive with an HSV-2 epitope mapping to approximately 0.67 to 0.73 map units. The antigenic specificities of lesion-derived CD4+ T-cell clones are quite diverse and include at least 10 epitopes. Human T-cell clones reactive with gC and VP16 are reported here for the first time.


Subject(s)
CD4-Positive T-Lymphocytes/immunology , Epitopes/immunology , Herpes Simplex/immunology , Herpesvirus 2, Human/immunology , Amino Acid Sequence , Clone Cells/immunology , Cross Reactions , Herpes Simplex Virus Protein Vmw65/immunology , Herpesvirus 1, Human/immunology , Humans , Molecular Sequence Data , Recurrence , Viral Envelope Proteins/immunology
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