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1.
Isr J Chem ; 63(3-4)2023 Mar.
Article in English | MEDLINE | ID: mdl-38046285

ABSTRACT

Functional regulation of cell signaling through dynamic changes in protein activity state as well as spatial organization represent two dynamic, complex, and conserved phenomena in biology. Seemingly separate areas of -omics method development have focused on building tools that can detect and quantify protein activity states, as well as map sub-cellular and intercellular protein organization. Integration of these efforts, through the development of chemical tools and platforms that enable detection and quantification of protein functional states with spatial resolution provide opportunities to better understand heterogeneity in the proteome within cell organelles, multi-cellular tissues, and whole organisms. This review provides an overview of and considerations for major classes of chemical proteomic probes and technologies that enable protein activity mapping from sub-cellular compartments to live animals.

2.
Nat Nanotechnol ; 16(1): 96-103, 2021 01.
Article in English | MEDLINE | ID: mdl-33139937

ABSTRACT

The role of membrane potential in most intracellular organelles remains unexplored because of the lack of suitable tools. Here, we describe Voltair, a fluorescent DNA nanodevice that reports the absolute membrane potential and can be targeted to organelles in live cells. Voltair consists of a voltage-sensitive fluorophore and a reference fluorophore for ratiometry, and acts as an endocytic tracer. Using Voltair, we could measure the membrane potential of different organelles in situ in live cells. Voltair can potentially guide the rational design of biocompatible electronics and enhance our understanding of how membrane potential regulates organelle biology.


Subject(s)
DNA/chemistry , Molecular Biology/instrumentation , Molecular Biology/methods , Organelles/chemistry , Animals , Electrophysiology/instrumentation , Electrophysiology/methods , Endocytosis , Equipment Design , Fluorescent Dyes , HEK293 Cells , Humans , Intracellular Membranes/chemistry , Lysosomes/chemistry , Membrane Potentials , Time-Lapse Imaging
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