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Biochim Biophys Acta ; 1680(1): 11-23, 2004 Oct 05.
Article in English | MEDLINE | ID: mdl-15451168

ABSTRACT

Editing of apolipoprotein (apo) B mRNA is mediated by an enzyme-complex that consists of the catalytic cytidine deaminase APOBEC-1 and the mRNA binding protein APOBEC-1 complementation factor or APOBEC-1 stimulating protein (ACF/ASP). Here we describe the detailed characterization of the structure, expression and splicing pattern of the mouse ACF/ASP gene. ACF/ASP mRNA is mainly expressed in mouse liver, small intestine and kidney. The deduced protein sequences of ACF/ASP from mouse and man share an identity of 93%. The mouse ACF/ASP gene consists of 12 exons and gives rise predominantly to full-length transcripts. To a minor extent (<10%) ACF/ASP mRNA with unspliced exon 8 is generated in liver, kidney and small intestine that encodes a truncated protein with a predicted molecular weight of 43 kDa. The promoter of the mouse ACF/ASP gene lacks a canonical TATA-box, but contains a cluster of Sp1 binding sites and uses multiple transcriptional initiation sites. Transfection studies demonstrated a preference of this promoter for cell lines derived from the gastrointestinal tract and proved the location of the promoter core region. The high sequence identity between man and mouse-much higher as observed for APOBEC-1-indicates a strong evolutionary constraint on the structure-function relationship of ACF/ASP, most probably due to a central role in editing and processing of apo B mRNA.


Subject(s)
Alternative Splicing , Codon, Nonsense/genetics , Gene Expression Regulation/physiology , RNA-Binding Proteins/genetics , Transcription Initiation Site , Amino Acid Sequence , Animals , Base Sequence , Mice , Molecular Sequence Data , Promoter Regions, Genetic , RNA, Messenger/metabolism , RNA-Binding Proteins/biosynthesis , Reverse Transcriptase Polymerase Chain Reaction
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