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1.
Plasmid ; 106: 102442, 2019 11.
Article in English | MEDLINE | ID: mdl-31669286

ABSTRACT

Helicobacter pylori, a human pathogen linked to many stomach diseases, is well adapted to colonize aggressive gastric environments, and its virulence factors contribute this adaptation. Here, we report the construction of two novel H. pylori vectors, pSv2 and pSv4, carrying a reporter gene fused to the promoters of virulence factor genes for monitoring the response of single H. pylori cells to various stresses. H. pylori cryptic plasmids were modified by the introduction of the Escherichia coli origin of replication, chloramphenicol resistance cassette, and promoterless gfp gene to produce E. coli/H. pylori shuttle vectors. The promoter regions of vacA and ureA genes encoding well-characterized H. pylori virulence factors were fused to the promoterless gfp gene. Recording the GFP fluorescence signal from the genetically modified H. pylori cells immobilized in specifically designed microfluidic devices revealed the response of transcriptional reporter systems to osmotic stress, acidic stress, elevated Ni2+ concentration or iron chelation. Our observations validate the utility of the pSv2 and pSv4 vectors to monitor the regulation of virulence factor genes in diverse strains and clinical isolates of H. pylori.


Subject(s)
Genes, Reporter , Helicobacter Infections/genetics , Helicobacter Infections/microbiology , Helicobacter pylori , Stress, Physiological/genetics , Transcription, Genetic , Gene Dosage , Genetic Vectors/genetics , Humans , Plasmids/genetics , Promoter Regions, Genetic , Transformation, Bacterial
2.
Eur J Med Chem ; 180: 143-153, 2019 Oct 15.
Article in English | MEDLINE | ID: mdl-31302447

ABSTRACT

The rise of antibiotic resistance has necessitated the development of alternative strategies for the treatment of infectious diseases. Antimicrobial peptides (AMPs), components of the innate immune response in various organisms, are promising next-generation drugs against bacterial infections. The ability of the medicinal leech Hirudo medicinalis to store blood for months with little change has attracted interest regarding the identification of novel AMPs in this organism. In this study, we employed computational algorithms to the medicinal leech genome assembly to identify amino acid sequences encoding potential AMPs. Then, we synthesized twelve candidate AMPs identified by the algorithms, determined their secondary structures, measured minimal inhibitory concentrations against three bacterial species (Escherichia coli, Bacillus subtilis, and Chlamydia thrachomatis), and assayed cytotoxic and haemolytic activities. Eight of twelve candidate AMPs possessed antimicrobial activity, and only two of them, 3967 (FRIMRILRVLKL) and 536-1 (RWRLVCFLCRRKKV), exhibited inhibition of growth of all tested bacterial species at a minimal inhibitory concentration of 10 µmol. Thus, we evidence the utility of the developed computational algorithms for the identification of AMPs with low toxicity and haemolytic activity in the medicinal leech genome assembly.


Subject(s)
Anti-Bacterial Agents/pharmacology , Antimicrobial Cationic Peptides/pharmacology , Bacterial Infections/drug therapy , Drug Resistance, Bacterial/drug effects , Algorithms , Animals , Anti-Bacterial Agents/chemistry , Antimicrobial Cationic Peptides/chemistry , Bacillus subtilis/drug effects , Bacillus subtilis/growth & development , Cell Line , Cell Survival/drug effects , Chlamydia/drug effects , Chlamydia/growth & development , Dose-Response Relationship, Drug , Escherichia coli/drug effects , Escherichia coli/growth & development , Hirudo medicinalis , Humans , Molecular Structure , Structure-Activity Relationship
3.
Biochimie ; 95(11): 2123-31, 2013 Nov.
Article in English | MEDLINE | ID: mdl-23954621

ABSTRACT

Fragilysin (BFT) is metalloprotease that is secreted by enterotoxigenic Bacteroides fragilis. Studying the mechanism of BFT interaction with intestinal epithelial cells requires a pure protein sample. In this study, we cloned DNA-fragments coding for the catalytic domain of fragilysin-2 and profragilysin-2 into an E. coli expression vector. Purification methods for the recombinant fragilysin-2 catalytic domain and profragilysin-2 were developed. In addition, we obtained mature active fragilysin-2 from recombinant proprotein by limited tryptic digestion. We tested the biological activity of the recombinant protein samples and revealed that E-cadherin was cleaved when HT-29 cells were treated with mature fragilysin-2 but not with profragilysin-2. Azocoll, azocasein and gelatin were not proteolytically cleaved by mature fragilysin-2. Proteins released in culture medium after HT-29 cells treatment with mature active BFT-2 were identified.


Subject(s)
Bacteroides fragilis/genetics , Cloning, Molecular , Metalloendopeptidases/chemistry , Metalloendopeptidases/isolation & purification , Azo Compounds/chemistry , Bacteroides fragilis/chemistry , Cadherins/chemistry , Caseins/chemistry , Catalytic Domain/genetics , Collagen/chemistry , Escherichia coli , Gelatin/chemistry , Gene Expression Regulation, Bacterial , HT29 Cells , Humans , Metalloendopeptidases/genetics
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