Surface Passivation by Embedment of Polyphosphate Inhibits the Aragonite-to-Calcite Thermodynamic Pump.

We monitored the conversion of aragonite to calcite in water by comparing single and mixed polymorph suspensions. We demonstrate that the enhanced aragonite-to-calcite conversion in mixed polymorph suspensions is dramatically inhibited by adding polyphosphate (sodium hexametaphosphate). 13C and 31P solid-state magic angle spinning (MAS) NMR and attenuated total reflectance Fourier transform infrared (ATR-FTIR) spectra allow us to follow quantitatively these effects as imparted by the dissolution-recrystallization processes. 31P{13C} and 13C{31P} rotational echo double resonance (REDOR)NMR experiments reveal coprecipitated phosphate that is embedded only within the surfaces of both polymorphs during the initial dissolution and recrystallization processes, causing passivation that arrests phase conversion.

Photoacoustic Detection of Weak Absorption Bands in Infrared Spectra of Calcite.

Photoacoustic spectroscopic detection of infrared absorption often produces spectra with enhanced intensities for weaker peaks, enabling the detection of features due to overtones and combinations, as well as less-abundant isotopic species. To illustrate this phenomenon, we present and discuss photoacoustic infrared spectra of calcite. We use linearization of rapid-scan spectra, as well as comparing step-scan and rapid-scan spectra, to demonstrate that saturation is not the driving force behind these enhanced intensities. Our results point to a significant knowledge gap, since a theoretical basis for the enhancement of these weak bands has not yet been developed.

Unveiling the thermolysis natures of ZIF-8 and ZIF-67 by employing in situ structural characterization studies.

The thermolysis routes of two isostructural metal-organic framework compounds (Zn-based ZIF-8 and Co-based ZIF-67) are investigated based on temperature-dependent and time-dependent in situ Fourier transform infrared (FTIR) spectroscopy and in situ X-ray diffraction data, as well as thermogravimetric-differential scanning calorimetry (TG-DSC) analyses and density functional theory (DFT) calculations. These data highlight thermolysis effects on different vibrations and dissociations within specific atomic moieties. The coordination differences between Zn-N and Co-N lead to the distinct thermolysis routes of ZIF-8 and ZIF-67. ZIF-8 is easily deformed during heating while decomposes at a higher temperature due to the saturated Zn-N coordination. ZIF-67, however, does not deform during heating due to the stronger Co-N bonds, but easily reacts with oxygen due to the unsaturated Co-N bonds. Our results demonstrate that in situ FTIR paired with in situ XRD is a powerful technique for MOF thermolysis investigation, and we suggest that the thermolysis mechanisms of MOFs may be unveiled by investigating a series of MOFs having different coordination types using in situ characterisation methods.

Vibrational properties of isotopically enriched materials: the case of calcite.

Isotope enrichment is widely used to affect atomic masses, facilitating data acquisition and peak assignments in experiments such as nuclear magnetic resonance and infrared spectroscopy. It is also used for elucidating the origin of weak features in systems where natural isotopic abundances are low. However, it is not possible to always know a priori precisely how vibrational modes change for arbitrary levels of isotopic substitution. Here, we examine this issue by presenting a joint experimental and theoretical study for the important case of 13C isotope substitution effects on the infrared spectra of calcite. By systematically varying the 13C : 12C ratio, we find that the relative positions and intensities of infrared-active vibrational modes can vary, in a non-linear and mode-dependent fashion, with minority isotope content and proximity. This allows us to determine the origin of weak spectral features due to the natural abundance of isotopes and to show that even relatively low levels of substitution are not necessarily within the "dilute limit," below which isotopic substitutions do not interact.

Regenerative nanobots based on magnetic layered double hydroxide for azo dye removal and degradation.

A highly regenerative multifunctional nanobot system, using Fe3O4@SiO2@MgFe-LDH nanoparticles, is developed for efficient removal of waterborne azo dyes and pharmaceuticals. Efficient capture of pollutants, powerful Fenton degradation, and superior materials regeneration lead to a simple and cost-effective wastewater remediation solution.

Quantifying disorder in colloidal films spin-coated onto patterned substrates.

Polycrystals of thin colloidal deposits, with thickness controlled by spin-coating speed, exhibit axial symmetry with local 4-fold and 6-fold symmetric structures, termed orientationally correlated polycrystals (OCPs). While spin-coating is a very facile technique for producing large-area colloidal deposits, the axial symmetry prevents us from achieving true long-range order. To obtain true long-range order, we break this axial symmetry by introducing a patterned surface topography and thus eliminate the OCP character. We then examine symmetry-independent methods to quantify order in these disordered colloidal deposits. We find that all the information in the bond-orientational order parameters is well captured by persistent homology analysis methods that only use the centers of the particles as input data. It is expected that these methods will prove useful in characterizing other disordered structures.

Quantitative Metrics for Assessing Positional and Orientational Order in Colloidal Crystals.

Although there are numerous self-assembly techniques to prepare colloidal crystals, there is great variability in the methods used to characterize order and disorder in these materials. We assess different kinds of structural order from more than 70 two-dimensional microscopy images of colloidal crystals produced by many common methods, including spin-coating, dip-coating, convective assembly, electrophoretic assembly, and sedimentation. Our suite of analysis methods includes measures for both positional and orientational order. The benchmarks are two-dimensional lattices that we simulated with different degrees of controlled disorder. We find that translational measures are adequate for characterizing small deviations from perfect order, whereas orientational measures are more informative for polycrystalline and highly disordered crystals. Our analysis presents a unified strategy for comparing structural order among different colloidal crystals and establishes benchmarks for future studies.

Linking crystal structure with temperature-sensitive vibrational modes in calcium carbonate minerals.

We demonstrate a correlation between how an IR-active vibrational mode responds to temperature changes and how it responds to crystallinity differences. Infrared (IR) spectroscopy was used to track changes in carbonate-related vibrational modes in three different CaCO3 polymorphs (calcite, aragonite, and vaterite) and CaMg(CO3)2 (dolomite) during heating. Of the three characteristic IR-active carbonate modes, the in-plane bending mode (ν4) shows the most pronounced changes with heating in polymorphs that have planar carbonate arrangements (calcite, aragonite, and dolomite). In contrast, this mode is virtually unchanged in vaterite, which has a canted arrangement of carbonate units. We correlate these trends with recent studies that identified the ν4 mode as most susceptible to changes related to crystallinity differences in calcite and amorphous calcium carbonate. Thus, our results suggest that studies of packing arrangements could provide a generalizable approach to identify the most diagnostic vibrational modes for tracking either temperature-dependent or crystallinity-related effects in IR-active solids.

Magnetosome-containing bacteria living as symbionts of bivalves.

Bacteria containing magnetosomes (protein-bound nanoparticles of magnetite or greigite) are common to many sedimentary habitats, but have never been found before to live within another organism. Here, we show that octahedral inclusions in the extracellular symbionts of the marine bivalve Thyasira cf. gouldi contain iron, can exhibit magnetic contrast and are most likely magnetosomes. Based on 16S rRNA sequence analysis, T. cf. gouldi symbionts group with symbiotic and free-living sulfur-oxidizing, chemolithoautotrophic gammaproteobacteria, including the symbionts of other thyasirids. T. cf. gouldi symbionts occur both among the microvilli of gill epithelial cells and in sediments surrounding the bivalves, and are therefore facultative. We propose that free-living T. cf. gouldi symbionts use magnetotaxis as a means of locating the oxic-anoxic interface, an optimal microhabitat for chemolithoautotrophy. T. cf. gouldi could acquire their symbionts from near-burrow sediments (where oxic-anoxic interfaces likely develop due to the host's bioirrigating behavior) using their superextensile feet, which could transfer symbionts to gill surfaces upon retraction into the mantle cavity. Once associated with their host, however, symbionts need not maintain structures for magnetotaxis as the host makes oxygen and reduced sulfur available via bioirrigation and sulfur-mining behaviors. Indeed, we show that within the host, symbionts lose the integrity of their magnetosome chain (and possibly their flagellum). Symbionts are eventually endocytosed and digested in host epithelial cells, and magnetosomes accumulate in host cytoplasm. Both host and symbiont behaviors appear important to symbiosis establishment in thyasirids.

Scaffold effects on osteogenic differentiation of equine mesenchymal stem cells: an in vitro comparative study.

The in vitro viability, osteogenic differentiation, and mineralization of four different equine mesenchymal stem cells (MSCs) from bone marrow, periosteum, muscle, and adipose tissue are compared, when they are cultured with different collagen-based scaffolds or with fibrin glue. The results indicate that bone marrow cells are the best source of MSCs for osteogenic differentiation, and that an electrochemically aggregated collagen gives the highest cell viability and best osteogenic differentiation among the four kinds of scaffolds studied.

A Strategy for Hydroxide Exclusion in Nanocrystalline Solid-State Metathesis Products.

We demonstrate a simple strategy to either prevent or enhance hydroxide incorporation in nanocrystalline solid-state metathesis reaction products prepared in ambient environments. As an example, we show that ZnCO3 (smithsonite) or Zn5(CO3)2(OH)6 (hydrozincite) forms extremely rapidly, in less than two minutes, to form crystalline domains of 11 ± 2 nm and 6 ± 2 nm, respectively. The phase selectivity between these nanocrystalline products is dominated by the alkalinity of the hydrated precursor salts, which may in turn affect the availability of carbon dioxide during the reaction. Thus, unlike traditional aqueous precipitation reactions, our solid-state method offers a way to produce hydroxide-free, nanocrystalline products without active pH control.

Controlled cell proliferation on an electrochemically engineered collagen scaffold.

Therapies for corneal disease and injury often rely on artificial implants, but integrating cells into synthetic corneal materials remains a significant challenge. The electrochemically formed collagen-based matrix presented here is non-toxic to cells and controls the proliferation in the corneal fibroblasts seeded onto it. Histology and biomolecular studies show a behavior similar to corneal stromal cells in a native corneal environment. Not only is this result an important first step toward developing a more realistic, multi-component artificial cornea, but it also opens possibilities for using this matrix to control and contain the growth of cells in engineered tissues.

Correlating mechanical properties with aggregation processes in electrochemically fabricated collagen membranes.

We show that mechanical stiffness is a useful metric for characterizing complex collagen assemblies, providing insight about aggregation products and pathways in collagen-based materials. This study focuses on mechanically robust collagenous membranes produced by an electrochemical synthesis process. Changing the duration of the applied electric field, or adjusting the electrolyte composition (by adding Ca(2+), K(+), or Na(+) or by changing pH), produces membranes with a range of Young's moduli as determined from force-displacement measurements with an atomic force microscope. The structural organization, characterized by UV-visible spectroscopy, Raman spectroscopy, optical microscopy, and atomic force microscopy, correlates with the mechanical stiffness. These data provide insights into the relative importance of different aggregation pathways enabled by our multiparameter electrochemically induced collagen assembly process.

Significant carrier concentration changes in native electrodeposited ZnO.

We show that unintentional hydrogen doping of ZnO during the electrodeposition process can impact the material's carrier concentration as significantly as others have reported for intentional extrinsic doping. Mott-Schottky analyses on the natively n-type electrodeposits show a decrease in the carrier concentrations from 10(21) to 10(18) cm(-3) with increasing overpotential. A strong link exists between larger optical band gaps (determined from diffuse reflectance spectroscopy) and higher carrier concentrations, which suggests that hydrogen-based doping underlies the n-type conductivity (Moss-Burstein effect). We propose that kinetic defects introduced during growth at larger overpotentials compete with hydrogen doping, thereby leading to lower net carrier concentrations. This has important implications for using the deposition potential to tune other electrodeposit properties such as the growth rate and morphology.

The effect of synthesis conditions and humidity on current-voltage relations in electrodeposited ZnO-based Schottky junctions.

Electrochemically produced ZnO/metal rectifying (Schottky) junctions can exhibit consistent barrier heights and high rectifying ratios when prepared using optimized electrolyte pH (6.5) and applied voltage (

Orientationally correlated colloidal polycrystals without long-range positional order.

We probe the local and global structure of spin-coated colloidal crystals via laser diffraction measurements and scanning electron and atomic force microscopies, and find that they are unique three-dimensional orientationally correlated polycrystals, exhibiting short-range positional order but long-range radial orientational correlations, reminiscent of-but distinct from-two-dimensional colloidal hexatic phases. Thickness and symmetries are controllable by solvent choice and spin speed. While the polycrystallinity of these colloidal films limits their applicability to photonics, we demonstrate their feasibility as templates to make crack-free magnetic patterns.

Electrochemically controlled growth and positioning of suspended collagen membranes.

Two independently recognized in vitro polymer aggregation variables, electric field and pH, can be used in concert to produce suspended membranes from solutions of type I collagen monomers, without need of a supporting substrate. A collagen network film can form at the alkaline-acidic pH interface created during the normal course of water electrolysis with parallel plate electrodes, and the anchoring location can be controlled by adjusting the bulk electrolyte pH. Electrosynthesized films remain intact upon drying and rehydration and function as ion-separation membranes even in submillimeter channels. This approach could benefit lab-on-a-chip technologies for the rational placement of membranes in microfluidic devices.