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1.
Sci Adv ; 7(9)2021 Feb.
Article in English | MEDLINE | ID: mdl-33627419

ABSTRACT

Ice-nucleating particles (INPs) in biomass-burning aerosol (BBA) that affect cloud glaciation, microphysics, precipitation, and radiative forcing were recently found to be driven by the production of mineral phases. BBA experiences extensive chemical aging as the smoke plume dilutes, and we explored how this alters the ice activity of the smoke using simulated atmospheric aging of authentic BBA in a chamber reactor. Unexpectedly, atmospheric aging enhanced the ice activity for most types of fuels and aging schemes. The removal of organic carbon particle coatings that conceal the mineral-based ice-active sites by evaporation or oxidation then dissolution can increase the ice activity by greater than an order of magnitude. This represents a different framework for the evolution of INPs from biomass burning where BBA becomes more ice active as it dilutes and ages, making a larger contribution to the INP budget, resulting cloud microphysics, and climate forcing than is currently considered.

2.
Proc Natl Acad Sci U S A ; 117(36): 21928-21937, 2020 09 08.
Article in English | MEDLINE | ID: mdl-32839314

ABSTRACT

Ice nucleation and the resulting cloud glaciation are significant atmospheric processes that affect the evolution of clouds and their properties including radiative forcing and precipitation, yet the sources and properties of atmospheric ice nucleants are poorly constrained. Heterogeneous ice nucleation caused by ice-nucleating particles (INPs) enables cloud glaciation at temperatures above the homogeneous freezing regime that starts near -35 °C. Biomass burning is a significant global source of atmospheric particles and a highly variable and poorly understood source of INPs. The nature of these INPs and how they relate to the fuel composition and its combustion are critical gaps in our understanding of the effects of biomass burning on the environment and climate. Here we show that the combustion process transforms inorganic elements naturally present in the biomass (not soil or dust) to form potentially ice-active minerals in both the bottom ash and emitted aerosol particles. These particles possess ice-nucleation activities high enough to be relevant to mixed-phase clouds and are active over a wide temperature range, nucleating ice at up to -13 °C. Certain inorganic elements can thus serve as indicators to predict the production of ice nucleants from the fuel. Combustion-derived minerals are an important but understudied source of INPs in natural biomass-burning aerosol emissions in addition to lofted primary soil and dust particles. These discoveries and insights should advance the realistic incorporation of biomass-burning INPs into atmospheric cloud and climate models. These mineral components produced in biomass-burning aerosol should also be studied in relation to other atmospheric chemistry processes, such as facilitating multiphase chemical reactions and nutrient availability.


Subject(s)
Aerosols/chemistry , Coal Ash/chemistry , Ice Cover/chemistry , Minerals/chemistry , Atmosphere/chemistry , Biomass , Climate Change , Freezing , Ice/analysis , Particle Size , Wildfires
3.
Biochemistry ; 54(39): 6071-81, 2015 Oct 06.
Article in English | MEDLINE | ID: mdl-26352296

ABSTRACT

Cu(A) is a binuclear electron transfer (ET) center found in cytochrome c oxidases (CcOs), nitrous oxide reductases (N2ORs), and nitric oxide reductase (NOR). In these proteins, the Cu(A) centers facilitate efficient ET (kET > 104s⁻¹) under low thermodynamic driving forces (10-90 mV). While the structure and functional properties of Cu(A) are well understood, a detailed mechanism of the incorporation of copper into the protein and the identity of the intermediates formed during the Cu(A) maturation process are still lacking. Previous studies of the Cu(A) assembly mechanism in vitro using a biosynthetic model Cu(A) center in azurin (Cu(A)Az) identified a novel intermediate X (Ix) during reconstitution of the binuclear site. However, because of the instability of Ix and the coexistence of other Cu centers, such as Cu(A)' and type 1 copper centers, the identity of this intermediate could not be established. Here, we report the mechanism of Cu(A) assembly using variants of Glu114XCuAAz (X = Gly, Ala, Leu, or Gln), the backbone carbonyl of which acts as a ligand to the Cu(A) site, with a major focus on characterization of the novel intermediate Ix. We show that Cu(A) assembly in these variants proceeds through several types of Cu centers, such as mononuclear red type 2 Cu, the novel intermediate Ix, and blue type 1 Cu. Our results show that the backbone flexibility of the Glu114 residue is an important factor in determining the rates of T2Cu → Ix formation, suggesting that Cu(A) formation is facilitated by swinging of the ligand loop, which internalizes the T2Cu capture complex to the protein interior. The kinetic data further suggest that the nature of the Glu114 side chain influences the time scales on which these intermediates are formed, the wavelengths of the absorption peaks, and how cleanly one intermediate is converted to another. Through careful understanding of these mechanisms and optimization of the conditions, we have obtained Ix in ∼80-85% population in these variants, which allowed us to employ ultraviolet-visible, electron paramagnetic resonance, and extended X-ray absorption fine structure spectroscopic techniques to identify the Ix as a mononuclear Cu(Cys)(2)(His) complex. Because some of the intermediates have been proposed to be involved in the assembly of native Cu(A), these results shed light on the structural features of the important intermediates and mechanism of Cu(A) formation.


Subject(s)
Azurin/chemistry , Copper/chemistry , Thermus thermophilus/chemistry , Catalytic Domain , Cysteine/chemistry , X-Ray Absorption Spectroscopy
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