Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 13 de 13
Filter
Add more filters










Publication year range
1.
Pediatr Blood Cancer ; 69(2): e29396, 2022 02.
Article in English | MEDLINE | ID: mdl-34662499

ABSTRACT

OBJECTIVES: Patients with metaiodobenzylguanidine (MIBG)-avid relapsed or refractory neuroblastoma after initial therapy may exhibit transient responses to salvage treatment with iodine-131 metaiodobenzylguanidine (131 I-MIBG). It is unclear whether disease progression following 131 I-MIBG treatment occurs in previously involved versus new anatomic sites of disease. Understanding this pattern of relapse will inform the use of consolidation therapy following 131 I-MIBG administration. METHODS: Patients with relapsed or refractory metastatic MIBG-avid neuroblastoma or ganglioneuroblastoma, who received single-agent 131 I-MIBG, had stable or responding disease 6-8 weeks following 131 I-MIBG, but subsequently experienced disease progression were included. MIBG scans were reviewed to establish anatomic and temporal evolution of MIBG-avid disease. RESULTS: A total of 84 MIBG-avid metastatic sites were identified immediately prior to MIBG therapy in a cohort of 12 patients. At first progression, a total of 101 MIBG-avid sites were identified, of which 69 (68%) overlapped with pre-treatment disease sites, while 32 (32%) represented anatomically new disease areas. Eight of 12 patients had one or more new MIBG-avid sites at first progression. Of the 69 involved sites at progression that overlapped with pre-treatment disease, 11 represented relapsed sites that had cleared following MIBG therapy, two were persistent but increasingly MIBG-avid, and 56 were stably persistent. CONCLUSIONS: Previously involved anatomic disease sites predominate at disease progression following 131 I-MIBG treatment. Nevertheless, the majority of patients progressed in at least one new anatomic disease site. This suggests that consolidation focal therapies targeting residual disease sites may be of limited benefit in preventing systemic disease progression following 131 I-MIBG treatment of relapsed or refractory neuroblastoma.


Subject(s)
Neoplasms, Second Primary , Neuroblastoma , 3-Iodobenzylguanidine/therapeutic use , Disease Progression , Humans , Iodine Radioisotopes/therapeutic use , Neoplasm Recurrence, Local/radiotherapy , Neoplasms, Second Primary/chemically induced , Neuroblastoma/diagnostic imaging , Neuroblastoma/pathology , Neuroblastoma/radiotherapy , Retrospective Studies
2.
Int J Radiat Oncol Biol Phys ; 97(2): 270-277, 2017 02 01.
Article in English | MEDLINE | ID: mdl-28068235

ABSTRACT

PURPOSE: External beam radiation therapy to initial sites of disease may influence relapse patterns in high-risk neuroblastoma. However, the effect of systemic irradiation by use of total body irradiation (TBI) on anatomic patterns of relapse has not previously been investigated. METHODS AND MATERIALS: We retrospectively analyzed patients receiving definitive treatment of high-risk neuroblastoma with subsequent relapse in bony metastatic sites, with a date of relapse between January 1, 1997, and December 31, 2012. Anatomic sites of disease, defined by metaiodobenzylguanidine (MIBG) avidity, were compared at diagnosis and at first relapse. The Fisher exact test was performed to compare relapse in initially involved sites between patients treated with and without TBI. RESULTS: Seventy-four patients with a median age at diagnosis of 3.5 years (range, 0.3-15.3 years) had relapse in 227 sites of MIBG-avid metastatic disease, with a median time to relapse of 1.8 years. Of the 227 sites of first relapse, 154 sites (68%) were involved at diagnosis. When we compared relapse patterns in patients treated with and without TBI, 12 of 23 patients (52%) treated with TBI had relapse in ≥1 previously MIBG-avid site of disease whereas 40 of 51 patients (78%) treated without TBI had relapse in ≥1 previously MIBG-avid site of disease (P=.03). CONCLUSIONS: Patients treated with systemic irradiation in the form of TBI were significantly less likely to have relapse in prior sites of disease. These findings support further investigation into the role of radiopharmaceutical therapies in curative multimodality therapy.


Subject(s)
Bone Neoplasms/diagnostic imaging , Bone Neoplasms/secondary , Neoplasm Recurrence, Local/diagnostic imaging , Neuroblastoma/diagnostic imaging , Neuroblastoma/radiotherapy , Neuroblastoma/secondary , Whole-Body Irradiation , 3-Iodobenzylguanidine , Adolescent , Adrenal Gland Neoplasms/pathology , Adrenal Gland Neoplasms/radiotherapy , Adrenal Gland Neoplasms/therapy , Child , Child, Preschool , Clinical Protocols , Combined Modality Therapy/methods , Female , Humans , Induction Chemotherapy/methods , Infant , Kaplan-Meier Estimate , Male , Neuroblastoma/therapy , Radiopharmaceuticals , Retrospective Studies , Risk , Statistics, Nonparametric , Stem Cell Transplantation , Transplantation, Autologous , Whole-Body Irradiation/statistics & numerical data
3.
Int J Radiat Oncol Biol Phys ; 97(1): 91-97, 2017 01 01.
Article in English | MEDLINE | ID: mdl-27838186

ABSTRACT

PURPOSE: To perform an in-depth temporal analysis of visual acuity (VA) outcomes after proton beam radiation therapy (PBRT) in a large, uniformly treated cohort of uveal melanoma (UM) patients, to determine trends in VA evolution depending on pretreatment and temporally defined posttreatment VA measurements; and to investigate the relevance of specific patient, tumor and dose-volume parameters to posttreatment vision loss. METHODS AND MATERIALS: Uveal melanoma patients receiving PBRT were identified from a prospectively maintained database. Included patients (n=645) received 56 GyE in 4 fractions, had pretreatment best corrected VA (BCVA) in the affected eye of count fingers (CF) or better, with posttreatment VA assessment at specified post-PBRT time point(s). Patients were grouped according to the pretreatment BCVA into favorable (≥20/40) or unfavorable (20/50-20/400) and poor (CF) strata. Temporal analysis of BCVA changes was described, and univariate and forward stepwise multivariate logistic regression analyses were performed to identify predictors for VA loss. RESULTS: Median VA follow-up was 53 months (range, 3-213 months). At 60-month follow up, among evaluable treated eyes with favorable pretreatment BCVA, 45% retained BCVA ≥20/40, whereas among evaluable treated eyes with initially unfavorable/poor BCVA, 21% had vision ≥20/100. Among those with a favorable initial BCVA, attaining BCVA of ≥20/40 at any posttreatment time point was associated with subsequent maintenance of excellent BCVA. Multivariate analysis identified volume of the macula receiving 28GyE (P<.0001) and optic nerve (P=.0004) as independent dose-volume histogram predictors of 48-month post-PBRT vision loss among initially favorable treated eyes. CONCLUSIONS: Approximately half of PBRT-treated UM eyes with excellent pretreatment BCVA assessed at 5 years after treatment will retain excellent long-term vision. 28GyE macula and optic nerve dose-volume histogram parameters allow for rational treatment planning optimization that may lead to improved visual outcomes. The detailed temporal analysis with intermediate as well as long-term functional prognosis, and the relationship of outcomes with clinical and treatment planning parameters, is critical for informed care of UM patients before and after PBRT.


Subject(s)
Melanoma/radiotherapy , Organ Sparing Treatments/methods , Proton Therapy/methods , Uveal Neoplasms/radiotherapy , Visual Acuity/radiation effects , Adolescent , Adult , Aged , Aged, 80 and over , Dose Fractionation, Radiation , Female , Follow-Up Studies , Humans , Macula Lutea/radiation effects , Male , Middle Aged , Optic Nerve/radiation effects , Proton Therapy/adverse effects , Radiotherapy Dosage , Regression Analysis , Time Factors , Treatment Outcome , Vision Disorders/etiology , Vision Disorders/prevention & control , Visual Acuity/physiology
4.
Int J Radiat Oncol Biol Phys ; 91(3): 661-8, 2015 Mar 01.
Article in English | MEDLINE | ID: mdl-25542309

ABSTRACT

PURPOSE: To demonstrate the clinical feasibility and potential benefits of sector beam intensity modulation (SBIM) specific to Gamma Knife stereotactic radiosurgery (GKSRS). METHODS AND MATERIALS: SBIM is based on modulating the confocal beam intensities from individual sectors surrounding an isocenter in a nearly 2π geometry. This is in contrast to conventional GKSRS delivery, in which the beam intensities from each sector are restricted to be either 0% or 100% and must be identical for any given isocenter. We developed a SBIM solution based on available clinical planning tools, and we tested it on a cohort of 12 clinical cases as a proof of concept study. The SBIM treatment plans were compared with the original clinically delivered treatment plans to determine dosimetric differences. The goal was to investigate whether SBIM would improve the dose conformity for these treatment plans without prohibitively lengthening the treatment time. RESULTS: A SBIM technique was developed. On average, SBIM improved the Paddick conformity index (PCI) versus the clinically delivered plans (clinical plan PCI = 0.68 ± 0.11 vs SBIM plan PCI = 0.74 ± 0.10, P=.002; 2-tailed paired t test). The SBIM plans also resulted in nearly identical target volume coverage (mean, 97 ± 2%), total beam-on times (clinical plan 58.4 ± 38.9 minutes vs SBIM 63.5 ± 44.7 minutes, P=.057), and gradient indices (clinical plan 3.03 ± 0.27 vs SBIM 3.06 ± 0.29, P=.44) versus the original clinical plans. CONCLUSION: The SBIM method is clinically feasible with potential dosimetric gains when compared with conventional GKSRS.


Subject(s)
Radiosurgery/methods , Radiotherapy Planning, Computer-Assisted/methods , Radiotherapy, Intensity-Modulated/methods , Brain Neoplasms/secondary , Brain Neoplasms/surgery , Epilepsy, Temporal Lobe/surgery , Feasibility Studies , Humans , Intracranial Arteriovenous Malformations/surgery , Meningeal Neoplasms/surgery , Meningioma/surgery , Neuroma, Acoustic/surgery , Pilot Projects , Radiosurgery/instrumentation , Trigeminal Neuralgia/surgery
5.
Int J Radiat Oncol Biol Phys ; 89(4): 839-45, 2014 Jul 15.
Article in English | MEDLINE | ID: mdl-24867534

ABSTRACT

PURPOSE/OBJECTIVES: Despite recent improvements in outcomes, 40% of children with high-risk neuroblastoma will experience relapse, facing a guarded prognosis for long-term cure. Whether recurrences are at new sites or sites of original disease may guide decision making during initial therapy. METHODS AND MATERIALS: Eligible patients were retrospectively identified from institutional databases at first metastatic relapse of high-risk neuroblastoma. Included patients had disease involving metaiodobenzylguanidine (MIBG)-avid metastatic sites at diagnosis and first relapse, achieved a complete or partial response with no more than one residual MIBG-avid site before first relapse, and received no total body irradiation or therapy with (131)I-MIBG before first relapse. Anatomically defined metastatic sites were tracked from diagnosis through first relapse to determine tendency of disease to recur at previously involved versus uninvolved sites and to assess whether this pattern was influenced by site irradiation. RESULTS: Of 159 MIBG-avid metastatic sites identified among 43 patients at first relapse, 131 (82.4%) overlapped anatomically with the set of 525 sites present at diagnosis. This distribution was similar for bone sites, but patterns of relapse were more varied for the smaller subset of soft tissue metastases. Among all metastatic sites at diagnosis in our subsequently relapsed patient cohort, only 3 of 19 irradiated sites (15.8%) recurred as compared with 128 of 506 (25.3%) unirradiated sites. CONCLUSIONS: Metastatic bone relapse in neuroblastoma usually occurs at anatomic sites of previous disease. Metastatic sites identified at diagnosis that did not receive radiation during frontline therapy appeared to have a higher risk of involvement at first relapse relative to previously irradiated metastatic sites. These observations support the current paradigm of irradiating metastases that persist after induction chemotherapy in high-risk patients. Furthermore, they raise the hypothesis that metastatic sites appearing to clear with induction chemotherapy may also benefit from radiotherapeutic treatment modalities (external beam radiation or (131)I-MIBG).


Subject(s)
Bone Neoplasms/secondary , Neuroblastoma/secondary , 3-Iodobenzylguanidine/pharmacokinetics , Adolescent , Bone Neoplasms/diagnostic imaging , Bone Neoplasms/drug therapy , Bone Neoplasms/radiotherapy , Child , Child, Preschool , Female , Humans , Induction Chemotherapy , Infant , Iodine Radioisotopes/therapeutic use , Male , Neoplasm Recurrence, Local/diagnostic imaging , Neoplasm Recurrence, Local/drug therapy , Neoplasm Recurrence, Local/radiotherapy , Neoplasm Recurrence, Local/secondary , Neuroblastoma/diagnostic imaging , Neuroblastoma/drug therapy , Neuroblastoma/radiotherapy , Radionuclide Imaging , Radiopharmaceuticals/pharmacokinetics , Retrospective Studies
6.
Biochim Biophys Acta ; 1838(4): 1082-7, 2014 Apr.
Article in English | MEDLINE | ID: mdl-24269540

ABSTRACT

The influenza A/M2 protein is a homotetrameric single-pass integral membrane protein encoded by the influenza A viral genome. Its transmembrane domain represents both a crucial drug target and a minimalistic model system for transmembrane proton transport and charge stabilization. Recent structural and functional studies of M2 have suggested that the proton transport mechanism involves sequential extraviral protonation and intraviral deprotonation of a highly conserved His37 side chain by the transported proton, consistent with a pH-activated proton shuttle mechanism. Multiple tautomeric forms of His can be formed, and it is not known whether they contribute to the mechanism of proton shuttling. Here we present the thermodynamic and functional characterization of an unnatural amino acid mutant at His37, where the imidazole side chain is substituted with a 4-thiazolyl group that is unable to undergo tautomerization and has a significantly lower solution pKa. The mutant construct has a similar stability to the wild-type protein at pH8 in bilayers and is virtually inactive at external pH7.4 in a semiquantitative liposome flux assay as expected from its lower sidechain pKa. However when the external buffer pH is lowered to 4.9 and 2.4, the mutant shows increasing amantadine sensitive flux of a similar magnitude to that of the wild type construct at pH7.4 and 4.9 respectively. These findings are in line with mechanistic hypotheses suggesting that proton flux through M2 is mediated by proton exchange from adjacent water molecules with the His37 sidechain, and that tautomerization is not required for proton translocation. This article is part of a Special Issue entitled: Viral Membrane Proteins - Channels for Cellular Networking.


Subject(s)
Influenza A virus/chemistry , Viral Matrix Proteins/physiology , Amino Acid Sequence , Hydrogen-Ion Concentration , Molecular Sequence Data , Mutation , Thermodynamics , Viral Matrix Proteins/chemistry
7.
Cancer ; 117(18): 4286-93, 2011 Sep 15.
Article in English | MEDLINE | ID: mdl-21387264

ABSTRACT

BACKGROUND: Adolescent and adult patients with neuroblastoma appear to have a more indolent disease course but a lower survival rate compared with their younger counterparts. The majority of neuroblastoma tumors specifically accumulate the radiolabeled norepinephrine analogue iodine-131-metaiodobenzylguanidine ((131) I-MIBG). Therefore, (131) I-MIBG has become increasingly used as targeted radiotherapy for patients with recurrent or refractory neuroblastoma. The objective of the current study was to characterize the toxicity and activity of this therapy in older patients. METHODS: The authors performed a retrospective analysis of 39 consecutive patients aged ≥10 years with recurrent or refractory neuroblastoma who were treated with (131) I-MIBG monotherapy at the University of California at San Francisco under phase 1, phase 2, and compassionate access protocols. RESULTS: Sixteen patients were aged ≥18 years at the time of MIBG treatment initiation, whereas 23 patients were ages 10 to 17 years. The median cumulative administered dose of (131) I-MIBG was 17.8 millicuries (mCi)/kg. The majority of treatments led to grade 3 or 4 hematologic toxicities (graded according to the National Cancer Institute Common Terminology Criteria for Adverse Events [version 3]) that were similar in frequency among age strata. Three patients subsequently developed a hematologic malignancy or myelodysplasia. The overall rate of complete plus partial response was 46%. Patients aged ≥18 years at the time of first MIBG treatment had a significantly higher response rate compared with patients ages 10 to 17 years (56% vs 39%; P = .023). The median overall survival was 23 months with a trend toward longer overall survival for the subgroup of patients aged ≥18 years (P = .12). CONCLUSIONS: The findings of the current study suggest that (131) I-MIBG is a highly effective salvage agent for adolescents and adults with neuroblastoma.


Subject(s)
3-Iodobenzylguanidine/therapeutic use , Neuroblastoma/radiotherapy , Radiopharmaceuticals/therapeutic use , 3-Iodobenzylguanidine/adverse effects , Adolescent , Adult , Antineoplastic Agents/administration & dosage , Child , Clinical Trials as Topic , Female , Humans , Male , Neuroblastoma/mortality , Radiopharmaceuticals/adverse effects , Recurrence , Survival Rate , Treatment Outcome
8.
Langmuir ; 27(7): 3815-21, 2011 Apr 05.
Article in English | MEDLINE | ID: mdl-21401044

ABSTRACT

The structure and function of the influenza A M2 proton channel have been the subject of intensive investigations in recent years because of their critical role in the life cycle of the influenza virus. Using a truncated version of the M2 proton channel (i.e., M2TM) as a model, here we show that fluctuations in the fluorescence intensity of a dye reporter that arise from both fluorescence quenching via the mechanism of photoinduced electron transfer (PET) by an adjacent tryptophan (Trp) residue and local motions of the dye molecule can be used to probe the conformational dynamics of membrane proteins. Specifically, we find that the dynamics of the conformational transition between the N-terminal open and C-terminal open states of the M2TM channel occur on a timescale of about 500 µs and that the binding of either amantadine or rimantadine does not inhibit the pH-induced structural equilibrium of the channel. These results are consistent with the direct occluding mechanism of inhibition which suggests that the antiviral drugs act by sterically occluding the channel pore.


Subject(s)
Fluorescence , Membrane Proteins/chemistry , Spectrometry, Fluorescence/methods , Viral Matrix Proteins/chemistry , Hydrogen-Ion Concentration , Liposomes/chemistry , Protein Conformation , Unilamellar Liposomes/chemistry
9.
Biochemistry ; 49(47): 10061-71, 2010 Nov 30.
Article in English | MEDLINE | ID: mdl-20968306

ABSTRACT

The influenza A/M2 protein exhibits inwardly rectifying, pH-activated proton transport that saturates at low pH. A comparison of high-resolution structures of the transmembrane domain at high and low pH suggests that pH-dependent conformational changes may facilitate proton conduction by alternately changing the accessibility of the N-terminal and C-terminal regions of the channel as a proton transits through the transmembrane domain. Here, we show that M2 functionally reconstituted in liposomes populates at least three different conformational states over a physiologically relevant pH range, with transition midpoints that are consistent with previously reported His37 pK(a) values. We then develop and test two similar, quantitative mechanistic models of proton transport, where protonation shifts the equilibrium between structural states having different proton affinities and solvent accessibilities. The models account well for a collection of experimental data sets over a wide range of pH values and voltages and require only a small number of adjustable parameters to accurately describe the data. While the kinetic models do not require any specific conformation for the protein, they nevertheless are consistent with a large body of structural information based on high-resolution nuclear magnetic resonance and crystallographic structures, optical spectroscopy, and molecular dynamics calculations.


Subject(s)
Protein Conformation/drug effects , Protons , Viral Matrix Proteins/chemistry , Animals , Hydrogen-Ion Concentration , Influenza A virus/metabolism , Ion Channels/physiology , Kinetics , Liposomes , Oocytes/metabolism , Xenopus
10.
Proc Natl Acad Sci U S A ; 107(34): 15075-80, 2010 Aug 24.
Article in English | MEDLINE | ID: mdl-20689043

ABSTRACT

The M2 proton channel from influenza A virus is an essential protein that mediates transport of protons across the viral envelope. This protein has a single transmembrane helix, which tetramerizes into the active channel. At the heart of the conduction mechanism is the exchange of protons between the His37 imidazole moieties of M2 and waters confined to the M2 bundle interior. Protons are conducted as the total charge of the four His37 side chains passes through 2(+) and 3(+) with a pK(a) near 6. A 1.65 A resolution X-ray structure of the transmembrane protein (residues 25-46), crystallized at pH 6.5, reveals a pore that is lined by alternating layers of sidechains and well-ordered water clusters, which offer a pathway for proton conduction. The His37 residues form a box-like structure, bounded on either side by water clusters with well-ordered oxygen atoms at close distance. The conformation of the protein, which is intermediate between structures previously solved at higher and lower pH, suggests a mechanism by which conformational changes might facilitate asymmetric diffusion through the channel in the presence of a proton gradient. Moreover, protons diffusing through the channel need not be localized to a single His37 imidazole, but instead may be delocalized over the entire His-box and associated water clusters. Thus, the new crystal structure provides a possible unification of the discrete site versus continuum conduction models.


Subject(s)
Influenza A virus/metabolism , Ion Channels/chemistry , Ion Channels/metabolism , Viral Matrix Proteins/chemistry , Viral Matrix Proteins/metabolism , Amino Acid Sequence , Animals , Biophysical Phenomena , Crystallography, X-Ray , Female , Histidine/chemistry , Hydrogen-Ion Concentration , In Vitro Techniques , Influenza A virus/genetics , Ion Channels/genetics , Ion Transport , Models, Molecular , Molecular Sequence Data , Mutagenesis, Site-Directed , Mutant Proteins/chemistry , Mutant Proteins/genetics , Mutant Proteins/metabolism , Oocytes/metabolism , Protein Conformation , Protein Multimerization , Protein Stability , Protons , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Viral Matrix Proteins/genetics , Xenopus
11.
Proc Natl Acad Sci U S A ; 106(30): 12283-8, 2009 Jul 28.
Article in English | MEDLINE | ID: mdl-19590009

ABSTRACT

The influenza A virus M2 protein (A/M2) is a homotetrameric pH-activated proton transporter/channel that mediates acidification of the interior of endosomally encapsulated virus. This 97-residue protein has a single transmembrane (TM) helix, which associates to form homotetramers that bind the anti-influenza drug amantadine. However, the minimal fragment required for assembly and proton transport in cellular membranes has not been defined. Therefore, the conductance properties of truncation mutants expressed in Xenopus oocytes were examined. A short fragment spanning residues 21-61, M2(21-61), was inserted into the cytoplasmic membrane and had specific, amantadine-sensitive proton transport activity indistinguishable from that of full-length A/M2; an epitope-tagged version of an even shorter fragment, M2(21-51)-FLAG, had specific activity within a factor of 2 of the full-length protein. Furthermore, synthetic fragments including a peptide spanning residues 22-46 were found to transport protons into liposomes in an amantadine-sensitive manner. In addition, the functionally important His-37 residue pK(a) values are highly perturbed in the tetrameric form of the protein, a property conserved in the TM peptide and full-length A/M2 in both micelles and bilayers. These data demonstrate that the determinants for folding, drug binding, and proton translocation are packaged in a remarkably small peptide that can now be studied with confidence.


Subject(s)
Ion Channels/physiology , Peptide Fragments/physiology , Viral Matrix Proteins/physiology , Amantadine/pharmacology , Amino Acid Sequence , Animals , Biological Transport/drug effects , Dopamine Agents/pharmacology , Female , HeLa Cells , Humans , Hydrogen-Ion Concentration , Ion Channels/chemistry , Ion Channels/genetics , Membrane Potentials/drug effects , Microinjections , Molecular Sequence Data , Peptide Fragments/chemistry , Peptide Fragments/genetics , Protein Multimerization , Protons , Sequence Homology, Amino Acid , Thermodynamics , Viral Matrix Proteins/chemistry , Viral Matrix Proteins/genetics , Xenopus
12.
Biochemistry ; 47(38): 9934-6, 2008 Sep 23.
Article in English | MEDLINE | ID: mdl-18754675

ABSTRACT

The M2 protein from influenza A is a pH-activated proton channel that plays an essential role in the viral life cycle and serves as a drug target. Using spin labeling EPR spectroscopy, we studied a 38-residue M2 peptide spanning the transmembrane region and its C-terminal extension. We obtained residue-specific environmental parameters under both high- and low-pH conditions for nine consecutive C-terminal sites. The region forms a membrane surface helix at both high and low pH, although the arrangement of the monomers within the tetramer changes with pH. Both electrophysiology and EPR data point to a critical role for residue Lys 49.


Subject(s)
Influenza A virus/chemistry , Viral Matrix Proteins/chemistry , Animals , Electron Spin Resonance Spectroscopy , Hydrogen-Ion Concentration , Lysine/chemistry , Protein Conformation , Protein Structure, Secondary , Protein Structure, Tertiary , Xenopus laevis
13.
J Raman Spectrosc ; 39(11): 1606-1613, 2008 Nov.
Article in English | MEDLINE | ID: mdl-20648227

ABSTRACT

The incorporation of unnatural amino acids into proteins that act as spectroscopic probes can be used to study protein structure and function. One such probe is 4-cyanophenylalanine (PheCN), the nitrile group of which has a stretching mode that occurs in a region of the vibrational spectrum that does not contain any modes from the usual components of proteins and the wavenumber is sensitive to the polarity of its environment. In this work we evaluate the potential of UV resonance Raman spectroscopy for monitoring the sensitivity of the νC≡N band of PheCN incorporated into proteins to the protein environment. Measurement of the Raman excitation profile of PheCN showed that considerable resonance enhancement of the Raman signal was obtained using UV excitation and the best signal-to-noise ratios were obtained with excitation wavelengths of 229 and 244 nm. The detection limit for PheCN in proteins was ~10 µM, approximately a hundred-fold lower than the concentrations used in IR studies, which increases the potential applications of PheCN as a vibrational probe. The wavenumber of the PheCN νC≡N band was strongly dependent on the polarity of its environment, when the solvent was changed from H(2)O to THF it decreased by 8 cm(-1). The presence of liposomes caused a similar though smaller decrease in νC≡N for a peptide, mastoparan X, modified to contain PheCN. The selectivity and sensitivity of resonance Raman spectroscopy of PheCN mean that it can be a useful probe of intra- and intermolecular interactions in proteins and opens the door to its application in the study of protein dynamics using time-resolved resonance Raman spectroscopy.

SELECTION OF CITATIONS
SEARCH DETAIL
...