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2.
Respir Res ; 23(1): 305, 2022 Nov 09.
Article in English | MEDLINE | ID: mdl-36352422

ABSTRACT

BACKGROUND: The club cell secretory protein (CC16) has anti-inflammatory and antioxidant effects and is a potential early biomarker of lung damage. The CC16 single nucleotide polymorphism (SNP) rs3741240 risk allele (A) has been inconsistently linked to asthma; other tagging SNPs in the gene have not been explored. The aim was to determine whether CC16 tagging polymorphisms are associated with adult asthma, asthma subtypes or asthma control in the Agricultural Lung Health Study (ALHS). METHODS: The ALHS is an asthma case-control study nested in the Agricultural Health Study cohort. Asthma cases were individuals with current doctor diagnosed asthma, likely undiagnosed asthma, or asthma-COPD overlap defined by questionnaire. We also examined asthma subtypes and asthma control. Five CC16 tagging SNPs were imputed to 1000 Genomes Integrated phase 1 reference panel. Logistic regression was used to estimate associations between CC16 SNPs and asthma outcomes adjusted for covariates. RESULTS: The sample included 1120 asthma cases and 1926 controls of European ancestry, with a mean age of 63 years. The frequency of the risk genotype (AA) for rs3741240 was 12.5% (n = 382). CC16 rs3741240 was not associated with adult asthma outcomes. A tagging SNP in the CC16 gene, rs12270961 was associated with uncontrolled asthma (n = 208, ORadj= 1.4, 95% CI 1.0, 1.9; p = 0.03). CONCLUSION: This study, the largest study to investigate associations between CC16 tagging SNPs and asthma phenotypes in adults, did not confirm an association of rs3741240 with adult asthma. A tagging SNP in CC16 suggests a potential relationship with asthma control.


Subject(s)
Asthma , Uteroglobin , Humans , Asthma/diagnosis , Asthma/epidemiology , Asthma/genetics , Case-Control Studies , Lung , Polymorphism, Single Nucleotide/genetics , Uteroglobin/genetics , Adult
3.
Clin Oncol (R Coll Radiol) ; 34(4): e149-e159, 2022 04.
Article in English | MEDLINE | ID: mdl-34750056

ABSTRACT

AIMS: Image-defined risk factors (IDRFs) in neuroblastoma predict surgical complications and management outcomes. As there is a lack of data regarding the association of IDRFs with clinical and pathological factors, this study evaluated the prognostic value of IDRFs to predict neuroblastoma survival outcomes. MATERIALS AND METHODS: This was a retrospective study including 345 patients and reviewed diagnostic imaging for 20 IDRFs, pleural effusions and ascites. The IDRFs were grouped into five 'primary IDRFs' cohorts with vascular encasement, involvement of multiple body compartments, organ infiltration, airway obstruction and intraspinal extension. The association between clinical, histopathological and biological characteristics of neuroblastoma and management was evaluated. RESULTS: More patients without IDRFs had operations compared with patients with IDRFs, with a trend towards significance (64.4% versus 35.6%, P = 0.082). Patients with multiple compartment tumour involvement (P = 0.003) and organ infiltration (P < 0.001) had a higher risk of surgical complications. The 5-year overall survival of the group with more than one IDRF was 0.0% and those with pleural effusions or ascites 6.7%, associated with the worst outcome (P = 0.005). The total number of IDRFs was not predictive of the metastatic remission rate (P = 0.585) or overall survival (P = 0.142), with no conclusive association found between IDRF groups and clinical or biological markers. CONCLUSIONS: Patients with more than one IDRF had the shortest survival time, whereas those with pleural effusions and ascites at diagnosis had a poor outcome. Standardised reporting of IDRFs is crucial for predicting prognosis.


Subject(s)
Neuroblastoma , Pleural Effusion , Ascites/etiology , Ascites/pathology , Biomarkers, Tumor , Humans , Neoplasm Staging , Neuroblastoma/diagnostic imaging , Neuroblastoma/surgery , Pleural Effusion/pathology , Prognosis , Retrospective Studies , Risk Factors , South Africa/epidemiology , Tomography, X-Ray Computed
4.
Phys Rev Lett ; 126(14): 141301, 2021 Apr 09.
Article in English | MEDLINE | ID: mdl-33891448

ABSTRACT

We present the first joint analysis of cluster abundances and auto or cross-correlations of three cosmic tracer fields: galaxy density, weak gravitational lensing shear, and cluster density split by optical richness. From a joint analysis (4×2pt+N) of cluster abundances, three cluster cross-correlations, and the auto correlations of the galaxy density measured from the first year data of the Dark Energy Survey, we obtain Ω_{m}=0.305_{-0.038}^{+0.055} and σ_{8}=0.783_{-0.054}^{+0.064}. This result is consistent with constraints from the DES-Y1 galaxy clustering and weak lensing two-point correlation functions for the flat νΛCDM model. Consequently, we combine cluster abundances and all two-point correlations from across all three cosmic tracer fields (6×2pt+N) and find improved constraints on cosmological parameters as well as on the cluster observable-mass scaling relation. This analysis is an important advance in both optical cluster cosmology and multiprobe analyses of upcoming wide imaging surveys.

5.
J Immunotoxicol ; 17(1): 153-162, 2020 12.
Article in English | MEDLINE | ID: mdl-32634062

ABSTRACT

Exposure to organic dust increases chronic airway inflammatory disorders. Effective treatment strategies are lacking. It has been reported that hog barn dust extracts (HDE) induce TNFα through protein kinase C (PKC) activation and that lung inflammation is enhanced in scavenger receptor A (SRA/CD204) knockout (KO) mice following HDE. Because interleukin (IL)-10 production can limit excessive inflammation, it was hypothesized here that HDE-induced IL-10 would require CD204 to effect inflammatory responses. C57BL/6 wild-type (WT), SRA KO, and IL-10 KO mice were intranasally challenged daily for 8 days with HDE and subsequently rested for 3 days with/without recombinant IL-10 (rIL-10) treatment. Primary peritoneal macrophages (PM) and murine alveolar macrophages (MH-S cells) were treated in vitro with HDE, SRA ligand (fucoidan), rIL-10, and/or PKC isoform inhibitors. HDE induced in vivo lung IL-10 in WT, but not SRA KO mice, and similar trends were demonstrated in isolated PM from same treated mice. Lung lymphocyte aggregates and neutrophils were elevated in in vivo HDE-treated SRA and IL-10 KO mice after a 3-d recovery, and treatment during recovery with rIL-10 abrogated these responses. In vitro rIL-10 treatment reduced HDE-stimulated TNFα release in MH-S and WT PM. In SRA KO macrophages, there was reduced IL-10 and PKC zeta (ζ) activity and increased TNFα following in vitro HDE stimulation. Similarly, blocking SRA (24 hr fucoidan pre-treatment) resulted in enhanced HDE-stimulated macrophage TNFα and decreased IL-10 and PKCζ activation. PKCζ inhibitors blocked HDE-stimulated IL-10, but not TNFα. Collectively, HDE stimulates IL-10 by an SRA- and PKCζ-dependent mechanism to regulate TNFα. Enhancing resolution of dust-mediated lung inflammation through targeting IL-10 and/or SRA may represent new approaches to therapeutic interventions.


Subject(s)
Dust/immunology , Farmer's Lung/immunology , Interleukin-10/metabolism , Lung Injury/immunology , Tumor Necrosis Factor-alpha/metabolism , Administration, Intranasal , Animals , Cell Line , Disease Models, Animal , Farmer's Lung/drug therapy , Farmer's Lung/pathology , Humans , Interleukin-10/genetics , Lung/pathology , Lung Injury/drug therapy , Lung Injury/pathology , Macrophages, Alveolar , Macrophages, Peritoneal , Male , Mice , Mice, Knockout , Polysaccharides/administration & dosage , Primary Cell Culture , Protein Kinase C/antagonists & inhibitors , Protein Kinase C/metabolism , Protein Kinase Inhibitors/administration & dosage , Scavenger Receptors, Class A/genetics , Scavenger Receptors, Class A/metabolism , Signal Transduction/drug effects , Signal Transduction/immunology , Tumor Necrosis Factor-alpha/genetics
6.
J Dairy Sci ; 103(9): 8197-8217, 2020 Sep.
Article in English | MEDLINE | ID: mdl-32564960

ABSTRACT

Senegal, located in West Africa, is an example of a low- to middle-income country where the government has prioritized improving livestock production self-sufficiency, with a strong focus on dairy. Among other initiatives, the use of exotic dairy cattle has been promoted, despite no evidence for the potential livelihood benefits (or otherwise) to smallholder farmers on adopting the new genetics. The current work fills this evidence gap by performing a farm-level economic study comparing the keeping of different breed and cross-breed types of dairy cattle under different management levels. Data for the study were obtained by monitoring 220 smallholder dairy cattle farms, with a combined cattle population of about 3,000 animals, over an almost 2-yr period. Findings of the study suggest that the most net-beneficial and cost-beneficial dairy cattle enterprise that could be used by the smallholder farmers was to keep crossbred indigenous zebu by exotic Bos taurus animals under management standards that are considered good compared with local standards. This dairy enterprise type was 7.4-fold more net beneficial and had a 1.4-fold more favorable cost-benefit ratio than the traditional system of keeping indigenous zebu animals under poor (low-input) management. Interestingly, the keeping of (near) pure B. taurus dairy cattle resulted in the highest milk yields and thus benefit from milk, but was not the most net beneficial due to the high costs of keeping these animals, particularly in terms of feed. We also found that increasing the management level of any of the breed or cross-breed types under consideration, including the indigenous zebu animals, resulted in an increased net benefit of 2.2- to 2.9-fold. Results of this economic analysis are discussed as part of a broader trade-off analysis, resulting in recommendations to strengthen the Senegal dairy sector. The combined intervention of improved dairy cattle genetics and management is considered a promising intervention to improve livelihoods of the rural poor as well as livestock production self-sufficiency for Senegal; some other system constraints are addressed.


Subject(s)
Breeding , Cattle/physiology , Dairying/methods , Animals , Farms , Female , Senegal
7.
Occup Med (Lond) ; 68(7): 448-453, 2018 Sep 13.
Article in English | MEDLINE | ID: mdl-29982820

ABSTRACT

BACKGROUND: Bioaerosol exposure occurs in several industries including green waste recycling, poultry farming, grain, animal feed and cotton production. Whilst several studies have investigated exposure and health effects in compost workers, the best questions to ask about health are uncertain. AIMS: This study aimed to develop a questionnaire to assess health symptoms in compost workers. METHODS: A 46-item questionnaire to ascertain possible symptoms of occupational illness related to bioaerosol exposure in a cohort of UK industrial compost workers and delivery in an interviewer-led format. The reliability of the questionnaire was assessed using Cronbach's α. A principal component analysis (PCA) was conducted to condense the questionnaire for practical purposes. RESULTS: One hundred and eleven (89%) workers completed the questionnaire. All items showed very good reliability (Cronbach's α = 0.83). After removing perfectly correlated questions from the data set, the PCA was conducted on a reduced data set of 28 items to explore underlying themes. Nine components were identified that explained 77% of the total variation. Nine of the questions removed prior to PCA due to perfect correlation were reintroduced because they added clinical value. The final questionnaire therefore consisted of 37 items and retained very adequate reliability (Cronbach's α = 0.76). CONCLUSIONS: Our health questionnaire has demonstrated adequate reliability when used within this industrial composting workforce. Further applications may include health surveillance, investigating outbreaks of occupational disease or research. Future work should examine the predictive validity of the questionnaire in these settings.


Subject(s)
Aerosols/adverse effects , Occupational Exposure/statistics & numerical data , Psychometrics/standards , Surveys and Questionnaires , Adult , Composting/statistics & numerical data , Female , Humans , Male , Psychometrics/instrumentation , Psychometrics/methods , Quality of Life/psychology , Reproducibility of Results , Social Planning
8.
Br J Anaesth ; 118(4): 570-575, 2017 Apr 01.
Article in English | MEDLINE | ID: mdl-28403395

ABSTRACT

BACKGROUND.: The acute respiratory distress syndrome (ARDS) is a condition with a high mortality and morbidity. Mechanical ventilation prevents immediate mortality but may further damage patients' lungs. Low tidal volume lung-protective strategies have been shown to increase survival by reducing this iatrogenic damage. Current guidelines recommend tidal volumes of 6-8 ml kg -1 of predicted body weight. We used data from three large randomized controlled trials of treatments for ARDS to determine compliance with these recommendations. METHODS.: We used the tidal volume recorded at randomization for all patients in the OSCAR, HARP-2, and BALTI-2 studies. In addition, we used the ventilation data for control arm patients in OSCAR and all patients in HARP-2 at days 1 and 7 after randomization. RESULTS.: The three trials enrolled 1660 patients, with tidal volume data available at least at one time point in 1412 patients. Compliance with the 6-8 ml kg -1 recommendation for tidal volume ranged from 20 to 39% of patients across all time points in all three trials. CONCLUSION.: Poor compliance with the guidelines for tidal volume in patients with ARDS has been demonstrated before in case series, but not in clinical trials where the patient population is specifically selected against standard ARDS diagnostic criteria and the investigators were encouraged to use low tidal volumes. This study may indicate a need to improve implementation and compliance with protective lung ventilation.


Subject(s)
Respiratory Distress Syndrome/physiopathology , Tidal Volume , Adolescent , Adult , Aged , Aged, 80 and over , Data Interpretation, Statistical , Female , Guideline Adherence , Humans , Male , Middle Aged , Randomized Controlled Trials as Topic/statistics & numerical data , Respiration, Artificial/statistics & numerical data , Respiratory Function Tests , Young Adult
9.
Transplant Proc ; 48(2): 479-84, 2016 Mar.
Article in English | MEDLINE | ID: mdl-27109982

ABSTRACT

BACKGROUND: Severe hypogammaglobulinemia (HGG) (IgG <400 mg/dL) following intestinal transplantation is common. Although IgG replacement therapy is commonly used, clinical outcomes associated with increasing IgG levels to >400 mg/dL are not well described. METHODS: Kaplan-Meier analysis was performed to estimate survival, the log-rank test to compare survival distributions between groups, and the Fisher exact test to determine the association between HGG and rejection. RESULTS: A total of 23 intestinal transplant (IT) recipients with a median age of 2.3 years (range, 0.7-41 years) at the time of HGG diagnosis were included. The types of transplants were liver-small bowel (73.9%), liver-small bowel-kidney (8.7%), and small bowel only (17.4%). The 3-year survival after the diagnosis of HGG was 50.2% (95% confidence interval [CI] = 28.2%-68.7%). There was no difference in survival (P = .67) when patients were dichotomized based upon IgG level at last follow-up (IgG ≥400 mg/dL, n = 14; and IgG <400 mg/dL, n = 9). There was no also evidence of an association between survival and: total dose (P = .58), frequency (P = .11), and number of IgG doses administered (P = .8). There was no difference in survival between patients receiving (n = 12) or not receiving (n = 11) cytomegalovirus hyperimmunoglobulin (P = .10). CONCLUSIONS: Improved survival rates were not found in our IT recipients with severe HGG with immunoglobulin therapy to IgG levels of ≥400 mg/dL, even when cytomegalovirus hyperimmunoglobulin was administered.


Subject(s)
Agammaglobulinemia/drug therapy , Immunization, Passive , Immunoglobulin G/therapeutic use , Immunologic Factors/therapeutic use , Intestines/transplantation , Postoperative Complications/drug therapy , Adolescent , Adult , Agammaglobulinemia/etiology , Agammaglobulinemia/mortality , Child , Child, Preschool , Female , Humans , Immunoglobulin G/blood , Infant , Kaplan-Meier Estimate , Male , Postoperative Complications/etiology , Postoperative Complications/mortality , Retrospective Studies , Survival Rate , Young Adult
10.
BJOG ; 123(11): 1853-61, 2016 Oct.
Article in English | MEDLINE | ID: mdl-26924123

ABSTRACT

OBJECTIVE: To quantify trends in 30-day mortality following surgery for endometrial carcinoma in England, and investigate hospital- and geographical-level variations. DESIGN: Retrospective population-based observational study using cancer registration and Hospital Episodes Statistics data. SETTING: England. POPULATION: Women diagnosed with endometrial carcinoma (ICD10 C54-C55 excluding sarcomas and malignant mixed Mullerian tumours) between 2000 and 2009 who were treated surgically (n = 38 332). METHODS: Random effects logistic regression model of postoperative mortality rates, adjusting for patient- and/or tumour-level factors (namely age, income deprivation, year of diagnosis, FIGO stage and grade). Case-mix adjusted postoperative mortality rates for hospitals and cancer networks were derived from the model. Multiple imputation was used to account for missing stage and grade data. MAIN OUTCOME MEASURES: 30-day postoperative mortality rate. RESULTS: For 2000-2009, the percentage of women dying within 30 days of surgery for endometrial carcinoma was very low at 0.61% (235 deaths), and decreased from 0.70% in 2000-2001 to 0.48% in 2008-2009. Postoperative mortality rates were lower for laparoscopic surgery, and higher for older women, those with advanced stage disease and high-grade tumours. Crude and case-mix adjusted results indicated that one hospital had a higher postoperative mortality rate than expected. CONCLUSIONS: The postoperative mortality rate for endometrial carcinoma in England is low and has improved since 2000, with increasing use of laparoscopic surgery. Postoperative mortality rates differed by surgical approach, patient age, disease stage and tumour grade. Only one hospital had a higher postoperative mortality rate than expected after adjusting for patient case-mix. TWEETABLE ABSTRACT: More women with endometrial cancer but better 30-day survival after surgery since 2000.


Subject(s)
Endometrial Neoplasms/mortality , Laparoscopy/mortality , Age Factors , Aged , Endometrial Neoplasms/pathology , Endometrial Neoplasms/surgery , England , Female , Humans , Logistic Models , Middle Aged , Neoplasm Grading , Neoplasm Staging , Postoperative Period , Registries , Retrospective Studies , Risk Factors , Time Factors
11.
Transplant Proc ; 47(10): 2799-804, 2015 Dec.
Article in English | MEDLINE | ID: mdl-26707291

ABSTRACT

BACKGROUND: Anonymity has been central to medical, psychosocial, and societal practices in organ donation and transplantation. The purpose of this investigation was to explore transplant professionals' views on anonymity in the context of organ transplantation. METHODS: The study consisted of an electronic 18-item survey distributed to the Canadian Society of Transplantation membership, asking about anonymity vs open communication/contact between organ recipients and donor families. RESULTS: Of the 541 members surveyed, 106 replied. Among respondents, 71% felt that organ recipients and donor families should only communicate anonymously, yet 47% felt that identifying information could be included in correspondence between consenting recipients and donor families. When asked whether organ recipients and donor families should be allowed to meet, 53% of respondents agreed, 27% disagreed, and 20% neither agreed nor disagreed. With social media facilitating communication and eliminating the ability to maintain donor/recipient anonymity, 38% of respondents felt that a reexamination of current policies and practices pertaining to anonymity was necessary. CONCLUSION: In conclusion, there was no dominant position on the issue of anonymity/communication between donor families and transplant recipients. Further research and discussion concerning the views of healthcare professionals, organ recipients, and donor families on the mandate of anonymity is needed and may influence future policy.


Subject(s)
Attitude of Health Personnel , Confidentiality , Tissue Donors , Transplant Recipients , Adult , Canada , Female , Humans , Male , Middle Aged , Societies, Medical , Surveys and Questionnaires , Young Adult
12.
S Afr Med J ; 105(11): 939-47, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26632323

ABSTRACT

BACKGROUND: Childhood cancer is an emerging problem in Africa. Its extent is hazy because data are scarce, but it should be addressed. This is the first report from the South African Children's Tumour Registry (SACTR), which covers the whole of South Africa (SA). It provides minimal estimates of cancer incidence and discusses the challenges of cancer surveillance and control in a child population in a middle-income country. Only about 2% of the African population is covered by cancer registries producing comparable incidence data. OBJECTIVE: To present and interpret incidence patterns and trends of childhood cancer over a 21-year period. The results should raise awareness of the problem of childhood cancer in an African population and provide sensible data for taking this problem in hand. METHODS: All eligible and validated cancer cases registered in the SACTR over the period 1987-2007 and classified according to the International Classification of Childhood Cancer were included. Population data were retrieved from official sources and estimated for the population subcategories. Incidence rates were standardised to the world standard and time trends were evaluated using joinpoint models, adjusting for sex and age. RESULTS: Based on the 11,699 cases, the overall age-standardised average annual incidence rate was 45 per million. Threefold differences in the overall incidence rates were observed between the ethnic groups, ranging from 116 for whites to 37 for black Africans, and they differed by diagnostic group. Differences between the nine provinces of SA relate to the ethnic composition and prevailing socioeconomic status. The overall incidence rate declined by 1.2% per year for the whole country (p<0.01). However, the decline was mainly observed during the first few years of the study period, after which rates stabilised or increased. CONCLUSIONS: Diagnosis and notification of childhood cancer should improve. The differences in incidence between ethnic groups suggest the priorities for cancer control.

13.
J Med Chem ; 58(17): 7021-56, 2015 Sep 10.
Article in English | MEDLINE | ID: mdl-26267483

ABSTRACT

Starting from the micromolar 8-quinoline carboxamide high-throughput screening hit 1a, a systematic exploration of the structure-activity relationships (SAR) of the 4-, 6-, and 8-substituents of the quinoline ring resulted in the identification of approximately 10-100-fold more potent human CD38 inhibitors. Several of these molecules also exhibited pharmacokinetic parameters suitable for in vivo animal studies, including low clearances and decent oral bioavailability. Two of these CD38 inhibitors, 1ah and 1ai, were shown to elevate NAD tissue levels in liver and muscle in a diet-induced obese (DIO) C57BL/6 mouse model. These inhibitor tool compounds will enable further biological studies of the CD38 enzyme as well as the investigation of the therapeutic implications of NAD enhancement in disease models of abnormally low NAD.


Subject(s)
ADP-ribosyl Cyclase 1/antagonists & inhibitors , Amides/chemistry , Aminoquinolines/chemistry , NAD/metabolism , Quinolines/chemistry , Amides/chemical synthesis , Amides/pharmacology , Aminoquinolines/chemical synthesis , Aminoquinolines/pharmacology , Animals , Biological Availability , Crystallography, X-Ray , Humans , Hydrolysis , Liver/metabolism , Membranes, Artificial , Mice, Inbred C57BL , Models, Molecular , Muscle, Skeletal/metabolism , Obesity/metabolism , Permeability , Protein Conformation , Quinolines/chemical synthesis , Quinolines/pharmacology , Stereoisomerism , Structure-Activity Relationship
14.
Epidemiol Infect ; 143(8): 1632-42, 2015 Jun.
Article in English | MEDLINE | ID: mdl-25316261

ABSTRACT

A large-scale mass vaccination campaign was carried out in Java, Indonesia in an attempt to control outbreaks of highly pathogenic avian influenza (HPAI) in backyard flocks and commercial smallholder poultry. Sero-monitoring was conducted in mass vaccination and control areas to assess the proportion of the target population with antibodies against HPAI and Newcastle disease (ND). There were four rounds of vaccination, and samples were collected after each round resulting in a total of 27 293 samples. Sampling was performed irrespective of vaccination status. In the mass vaccination areas, 20-45% of poultry sampled had a positive titre to H5 after each round of vaccination, compared to 2-3% in the control group. In the HPAI + ND vaccination group, 12-25% of the population had positive ND titres, compared to 5-13% in the areas without ND vaccination. The level of seropositivity varied by district, age of the bird, and species (ducks vs. chickens).


Subject(s)
Antibodies, Viral/immunology , Influenza Vaccines/therapeutic use , Influenza in Birds/prevention & control , Newcastle Disease/prevention & control , Animals , Chickens , Ducks , Indonesia , Influenza A Virus, H5N1 Subtype/immunology , Influenza Vaccines/immunology , Influenza in Birds/immunology , Mass Vaccination , Newcastle Disease/immunology , Newcastle disease virus/immunology , Poultry , Risk Factors , Viral Vaccines/immunology , Viral Vaccines/therapeutic use
15.
Transbound Emerg Dis ; 62(2): 163-73, 2015 Apr.
Article in English | MEDLINE | ID: mdl-23702277

ABSTRACT

We conducted an operational research study involving backyard and semicommercial farms on Java Island, Indonesia, between April 2008 and September 2009 to evaluate the effectiveness of two preventive mass vaccination strategies against highly pathogenic avian influenza (HPAI). One regimen used Legok 2003 H5N1 vaccine, while the other used both Legok 2003 H5N1 and HB1 Newcastle disease (ND) vaccine. A total of 16 districts were involved in the study. The sample size was estimated using a formal power calculation technique that assumed a detectable effect of treatment as a 50% reduction in the baseline number of HPAI-compatible outbreaks. Within each district, candidate treatment blocks with village poultry populations ranging from 80 000 to 120 000 were created along subdistrict boundary lines. Subsequently, four of these blocks were randomly selected and assigned one treatment from a list that comprised control, vaccination against HPAI, vaccination against HPAI + ND. Four rounds of vaccination were administered at quarterly intervals beginning in July 2008. A vaccination campaign involved vaccinating 100 000 birds in a treatment block, followed by another 100 000 vaccinations 3 weeks later as a booster dose. Data on disease incidence and vaccination coverage were also collected at quarterly intervals using participatory epidemiological techniques. Compared with the unvaccinated (control) group, the incidence of HPAI-compatible events declined by 32% (P = 0.24) in the HPAI-vaccinated group and by 73% (P = 0.00) in the HPAI- and ND-vaccinated group. The effect of treatment did not vary with time or district. Similarly, an analysis of secondary data from the participatory disease and response (PDSR) database revealed that the incidence of HPAI declined by 12% in the HPAI-vaccinated group and by 24% in the HPAI + ND-vaccinated group. The results suggest that the HPAI + ND vaccination significantly reduced the incidence of HPAI-compatible events in mixed populations of semicommercial and backyard poultry.


Subject(s)
Disease Outbreaks/veterinary , Influenza A Virus, H5N1 Subtype/immunology , Influenza in Birds/epidemiology , Influenza in Birds/prevention & control , Mass Vaccination/veterinary , Newcastle disease virus/immunology , Viral Vaccines/immunology , Animals , Disease Outbreaks/prevention & control , Incidence , Indonesia/epidemiology , Influenza A Virus, H5N1 Subtype/pathogenicity , Multivariate Analysis , Poultry , Regression Analysis , Viral Vaccines/administration & dosage
16.
Vox Sang ; 106(3): 242-7, 2014 Apr.
Article in English | MEDLINE | ID: mdl-24795954

ABSTRACT

BACKGROUND: Kell is a complex blood group system comprising 35 antigens. Kell antigens are absent from rare red cells of the Ko (null) phenotype and expressed only weakly in the Kmod phenotype. Molecular analysis of three uncommon KEL alleles elucidated the obscure pattern of inheritance of Kell antigens in one family. MATERIALS AND METHODS: Standard serological methods were employed. All exons, flanking intronic sequence and introns 15 and 16 of KEL were sequenced from genomic DNA. cDNA was obtained from erythroid cells cultured from progenitor cells isolated from peripheral blood. RESULTS: The Kmod propositus was heterozygous for two KEL mutations: c.2107G>A, p.Gly703Arg and a synonymous mutation, c.1719C>T, in the codon for p.573Gly. Sequencing of cDNA revealed that c.1719C>T caused skipping of exon 16, resulting in a silent allele. Her KEL:3,-4 brother was heterozygous for KEL*03/04 and c.1719C/T. CONCLUSION: A synonymous mutation caused complete exon skipping, despite being located 16 bases downstream of the 3' splice site, resulting in a null KEL allele. The combined effects of two mod alleles, one responsible for KEL3 expression and the other for p.Gly703Arg, were probably responsible for an unexpected KEL:3,-4 phenotype.


Subject(s)
Alleles , Amino Acid Substitution/genetics , Gene Deletion , Kell Blood-Group System/genetics , Kell Blood-Group System/immunology , Arginine/genetics , Base Sequence , Cells, Cultured , Erythrocytes/immunology , Erythroid Precursor Cells/immunology , Female , Genetic Carrier Screening , Glycine/genetics , Humans , Immunophenotyping , Kell Blood-Group System/blood , Male , Mutation , Pedigree , RNA Splice Sites/genetics , Real-Time Polymerase Chain Reaction
17.
J Fish Biol ; 84(1): 231-6, 2014 Jan.
Article in English | MEDLINE | ID: mdl-24383807

ABSTRACT

The effect of water temperature on growth responses of three common seagrass fish species that co-occur as juveniles in the estuaries in Sydney (34° S) but have differing latitudinal ranges was measured: Pelates sexlineatus (subtropical to warm temperate: 27-35°S), Centropogon australis (primarily subtropical to warm temperate: 24-37°S) and Acanthaluteres spilomelanurus (warm to cool temperate: below 32°S). Replicate individuals of each species were acclimated over a 7 day period in one of three temperature treatments (control: 22°C, low: 18°C and high: 26°C) and their somatic growth was assessed within treatments over 10 days. Growth of all three species was affected by water temperature, with the highest growth of both northern species (P. sexlineatus and C. australis) at 22 and 26°C, whereas growth of the southern ranging species (A. spilomelanurus) was reduced at temperatures higher than 18°C, suggesting that predicted increase in estuarine water temperatures through climate change may change relative performance of seagrass fish assemblages.


Subject(s)
Climate Change , Ecosystem , Perciformes/growth & development , Temperature , Animals , Australia , Estuaries
18.
Transbound Emerg Dis ; 61(1): 60-8, 2014 Feb.
Article in English | MEDLINE | ID: mdl-22925404

ABSTRACT

We quantified the between-village transmission rate, ß (the rate of transmission of H5N1 HPAI virus per effective contact), and the reproductive number, Re (the average number of outbreaks caused by one infectious village during its entire infectious period), of H5N1 highly pathogenic avian influenza (HPAI) virus in Nigeria using outbreak data collected between December 2005 and July 2008. We classified the outbreaks into two phases to assess the effectiveness of the control measures implemented. Phase 1 (December 2005-October 2006) represents the period when the Federal Government of Nigeria managed the HPAI surveillance and response measures, while Phase 2 (November 2006-July 2008) represents the time during which the Nigeria Avian Influenza Control and Human Pandemic Preparedness project (NAICP), funded by a World Bank credit of US$ 50 million, had taken over the management of most of the interventions. We used a total of 204 outbreaks from 176 villages that occurred in 78 local government areas of 25 states. The compartmental susceptible-infectious model was used as the analytical tool. Means and 95% percentile confidence intervals were obtained using bootstrapping techniques. The overall mean ß (assuming a duration of infectiousness, T, of 12 days) was 0.07/day (95% percentile confidence interval: 0.06-0.09). The first and second phases of the epidemic had comparable ß estimates of 0.06/day (0.04-0.09) and 0.08/day (0.06-0.10), respectively. The Re of the virus associated with these ß and T estimates was 0.9 (0.7-1.1); the first and second phases of the epidemic had Re of 0.84 (0.5-1.2) and 0.9 (0.6-1.2), respectively. We conclude that the intervention measures implemented in the second phase of the epidemic had comparable effects to those implemented during the first phase and that the Re of the epidemic was low, indicating that the Nigeria H5N1 HPAI epidemic was unstable.


Subject(s)
Basic Reproduction Number , Disease Outbreaks/veterinary , Influenza A Virus, H5N1 Subtype/isolation & purification , Influenza in Birds/transmission , Animals , Influenza A Virus, H5N1 Subtype/pathogenicity , Influenza in Birds/epidemiology , Influenza in Birds/virology , Nigeria/epidemiology , Poultry/virology , Residence Characteristics , Space-Time Clustering , Time Factors
19.
BJOG ; 121(6): 728-38; discussion 739, 2014 May.
Article in English | MEDLINE | ID: mdl-24148762

ABSTRACT

OBJECTIVE: To explore the trends and age characteristics of vulval cancer incidence, mortality, survival and stage of disease. DESIGN: Retrospective population-based observational study based on cancer registry and Office for National Statistics data. SETTING: England. POPULATION: All women diagnosed with vulval cancer, defined by the site of the tumour (ICD-10 code C51). METHODS: Including all C51 cases, Poisson regression was used to test for trends in incidence and mortality rates, and generalised linear modelling was used to test for trends in relative survival. Excluding women with melanomas, basal cell carcinomas and Paget disease, stage was investigated as a percentage of staged data by age. MAIN OUTCOME MEASURES: Age-standardised incidence and mortality rates, relative survival rates and stage of disease at diagnosis. RESULTS: From 1990, there was a statistically significant increase in overall incidence (P = 0.018) and decrease in mortality (P < 0.001). In addition, there were statistically significant increases in overall survival (1-year, P < 0.001; 5-year, P < 0.001). However, from 1990, incidence increased in women aged 20-39 years (P = 0.002), 40-49 and 50-59 years (both P < 0.001) and 60-69 years (P = 0.030) and decreased in women aged 80 years and above (P < 0.001). There were statistically significant decreases in mortality in women aged ≥60 years (P < 0.001), and statistically significant increases in 1-year survival in women aged ≥40 years (P ≤ 0.047) and in 5-year survival in women aged 40-49 and ≥60 years (P ≤ 0.011). Stage patterns by age highlight diagnosis at an earlier stage in younger women and more advanced stage diagnosis in older women. CONCLUSION: Survival from vulval cancer has improved and mortality has decreased since 1990. The overall incidence of disease has increased as a result of more new diagnoses in the under 70-year age group.


Subject(s)
Vulvar Neoplasms/epidemiology , Adult , Age Distribution , Age Factors , Aged , Aged, 80 and over , Carcinoma in Situ/epidemiology , Carcinoma, Squamous Cell/epidemiology , England/epidemiology , Female , Humans , Incidence , Lichen Planus/epidemiology , Lichen Sclerosus et Atrophicus/epidemiology , Middle Aged , Mortality/trends , Neoplasm Staging , Papillomavirus Infections/epidemiology , Papillomavirus Vaccines , Poisson Distribution , Registries , Retrospective Studies , Risk Factors , Sentinel Surveillance , Survival Analysis , Vulvar Neoplasms/mortality , Vulvar Neoplasms/pathology , Vulvar Neoplasms/prevention & control
20.
S Afr Med J ; 104(11): 743-51, 2014 Nov.
Article in English | MEDLINE | ID: mdl-25909112

ABSTRACT

The spectrum of sickle cell disease (SCD) encompasses a heterogeneous group of disorders that include: (I) homozygous SCD (HbSS), also referred to as sickle cell anaemia; (ii) heterozygous SCD (HbAS), also referred to as sickle cell trait; and (iii) compound heterozygous states such as HbSC disease, HbSß thalassaemia, etc. Homozygous or compound heterozygous SCD patients manifest with clinical disease of varying severity that is influenced by biological and environmental factors, whereas subject with sickle cell trait are largely asymptomatic. SCD is characterized by vaso-occlusive episodes that result in tissue ischaemia and pain in the affected region. Repeated infarctive episodes cause organ damage and may eventually lead to organ failure. For effective management, regular follow-up with support from a multidisciplinary healthcare team is necessary. The chronic nature of the disease, the steady increase in patient numbers, and relapsing acute episodes have cost implications that are likely to impact on provincial and national health budgets. Limited resources mandate local management protocols for the purposes of consistency and standardisation, which could also facilitate sharing of resources between centres for maximal utility. These recommendations have been developed for the South African setting, and it is intended to update them regularly to meet new demands and challenges.


Subject(s)
Anemia, Sickle Cell/therapy , Practice Guidelines as Topic , Disease Management , Hemoglobin SC Disease/therapy , Pain Management/methods , Sickle Cell Trait/therapy , South Africa
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