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1.
Clin Sports Med ; 42(3): 427-440, 2023 Jul.
Article in English | MEDLINE | ID: mdl-37208057

ABSTRACT

This article focuses on the management of the most common on-field medical emergencies. As with any discipline in medicine, a well-defined plan and systematic approach is the cornerstone of quality health care delivery. In addition, the team-based collaboration is necessary for the safety of the athlete and the success of the treatment plan.


Subject(s)
Sports Medicine , Sports , Humans , Death, Sudden, Cardiac , Emergencies , Athletes
2.
Cell ; 179(5): 1207-1221.e22, 2019 Nov 14.
Article in English | MEDLINE | ID: mdl-31730858

ABSTRACT

Accurate measurement of clonal genotypes, mutational processes, and replication states from individual tumor-cell genomes will facilitate improved understanding of tumor evolution. We have developed DLP+, a scalable single-cell whole-genome sequencing platform implemented using commodity instruments, image-based object recognition, and open source computational methods. Using DLP+, we have generated a resource of 51,926 single-cell genomes and matched cell images from diverse cell types including cell lines, xenografts, and diagnostic samples with limited material. From this resource we have defined variation in mitotic mis-segregation rates across tissue types and genotypes. Analysis of matched genomic and image measurements revealed correlations between cellular morphology and genome ploidy states. Aggregation of cells sharing copy number profiles allowed for calculation of single-nucleotide resolution clonal genotypes and inference of clonal phylogenies and avoided the limitations of bulk deconvolution. Finally, joint analysis over the above features defined clone-specific chromosomal aneuploidy in polyclonal populations.


Subject(s)
DNA Replication/genetics , Genome, Human , High-Throughput Nucleotide Sequencing , Single-Cell Analysis , Aneuploidy , Animals , Cell Cycle/genetics , Cell Line, Tumor , Cell Shape , Cell Survival , Chromosomes, Human/genetics , Clone Cells , DNA Transposable Elements/genetics , Diploidy , Female , Genotype , Humans , Male , Mice , Mutation/genetics , Phylogeny , Polymorphism, Single Nucleotide/genetics
3.
Adv Ther ; 35(1): 100-115, 2018 01.
Article in English | MEDLINE | ID: mdl-29222625

ABSTRACT

INTRODUCTION: We incorporated patient feedback from human factors studies (HFS) in the patient-centric design and validation of ava®, an electromechanical device (e-Device) for self-injecting the anti-tumor necrosis factor certolizumab pegol (CZP). METHODS: Healthcare professionals, caregivers, healthy volunteers, and patients with rheumatoid arthritis, psoriatic arthritis, ankylosing spondylitis, or Crohn's disease participated in 11 formative HFS to optimize the e-Device design through intended user feedback; nine studies involved simulated injections. Formative participant questionnaire feedback was collected following e-Device prototype handling. Validation HFS (one EU study and one US study) assessed the safe and effective setup and use of the e-Device using 22 predefined critical tasks. Task outcomes were categorized as "failures" if participants did not succeed within three attempts. RESULTS: Two hundred eighty-three participants entered formative (163) and validation (120) HFS; 260 participants performed one or more simulated e-Device self-injections. Design changes following formative HFS included alterations to buttons and the graphical user interface screen. All validation HFS participants completed critical tasks necessary for CZP dose delivery, with minimal critical task failures (12 of 572 critical tasks, 2.1%, in the EU study, and 2 of 5310 critical tasks, less than 0.1%, in the US study). CONCLUSION: CZP e-Device development was guided by intended user feedback through HFS, ensuring the final design addressed patients' needs. In both validation studies, participants successfully performed all critical tasks, demonstrating safe and effective e-Device self-injections. FUNDING: UCB Pharma. Plain language summary available on the journal website.


Subject(s)
Antirheumatic Agents/administration & dosage , Arthritis/drug therapy , Certolizumab Pegol/administration & dosage , Crohn Disease/drug therapy , Equipment Design/methods , Adult , Aged , Antirheumatic Agents/therapeutic use , Arthritis, Psoriatic/drug therapy , Arthritis, Rheumatoid/drug therapy , Certolizumab Pegol/therapeutic use , Female , Humans , Injections, Subcutaneous , Male , Middle Aged , Spondylitis, Ankylosing/drug therapy , Tumor Necrosis Factor-alpha/antagonists & inhibitors
4.
Sci Total Environ ; 622-623: 727-734, 2018 May 01.
Article in English | MEDLINE | ID: mdl-29223899

ABSTRACT

The heterogeneous reaction of dinitrogen pentoxide (N2O5) on aerosols is an important sink of nitrogen oxides (NOx) in the polluted boundary layer, and the production of nitryl chloride (ClNO2) can have significant effects on the atmospheric oxidative capacity. However, the heterogeneous loss of N2O5 and the formation of ClNO2 are still not well quantified, especially in China. In a previous study, we measured ClNO2 and N2O5 concentrations in several air masses at a high-elevation site in Hong Kong, and found the highest levels ever reported at one night. The present study employed an iterative box model to investigate five N2O5/ClNO2-laden nights. We first estimated the N2O5 uptake coefficient and ClNO2 yield and then calculated the relative importance of N2O5 heterogeneous reactions to NOx loss and the accumulated ClNO2 production over the entire night. The average uptake coefficient was 0.004±0.003, and the average yield was 0.42±0.26. As the air masses aged, the accumulated ClNO2 reached up to 6.0ppbv, indicating significant production of ClNO2 in the polluted air from the Pearl River Delta. ClNO2 formation (N2O5+Cl-), N2O5 hydrolysis (N2O5+H2O), and NO3 reactions with volatile organic compounds (NO3+VOCs) consumed 23%, 27%, and 47% of the produced NO3, respectively, as the average for five nights. A significant portion of the NOx in the air masses (70%±10%) was removed during the night via NO3 reactions with VOCs (~40%) and N2O5 heterogeneous loss (~60%).

5.
Age (Dordr) ; 38(3): 61, 2016 Jun.
Article in English | MEDLINE | ID: mdl-27216158

ABSTRACT

We have reported telomere attrition in ß and α cells of the pancreas in elderly patients with type 2 diabetes, but it has not been explored how the telomere lengths of these islet cells change according to age in normal subjects. To examine the telomere lengths of ß and α cells in individuals without diabetes across a wide range of ages, we conducted measurement of the telomere lengths of human pancreatic ß and α cells obtained from 104 autopsied subjects without diabetes ranging in age from 0 to 100 years. As an index of telomere lengths, the normalized telomere-centromere ratio (NTCR) was determined for ß (NTCRß) and α (NTCRα) cells by quantitative fluorescence in situ hybridization (Q-FISH). We found NTCRß and NTCRα showed almost the same levels and both decreased according to age (p < 0.001 for both). NTCRs decreased more rapidly with age and were more widely distributed (p = 0.036 for NTCRß, p < 0.001 for NTCRα) in subjects under 18 years of age than in subjects over 18 years. There was a positive correlation between NTCRß and NTCRα only among adult subjects (p < 0.001). In conclusion, the telomeres of ß and α cells become shortened with normal aging process.


Subject(s)
Aging/genetics , Diabetes Mellitus, Type 2/genetics , Glucagon-Secreting Cells/metabolism , Insulin-Secreting Cells/metabolism , Telomere/genetics , Adult , Aged , Diabetes Mellitus, Type 2/metabolism , Diabetes Mellitus, Type 2/pathology , Female , Follow-Up Studies , Glucagon-Secreting Cells/pathology , Humans , In Situ Hybridization, Fluorescence , Insulin-Secreting Cells/pathology , Male , Middle Aged , Retrospective Studies
6.
PLoS One ; 11(3): e0150675, 2016.
Article in English | MEDLINE | ID: mdl-26938915

ABSTRACT

Platinum-based combination chemotherapy is the standard treatment for advanced non-small cell lung cancer (NSCLC). While cisplatin is effective, its use is not curative and resistance often emerges. As a consequence of microenvironmental heterogeneity, many tumour cells are exposed to sub-lethal doses of cisplatin. Further, genomic heterogeneity and unique tumor cell sub-populations with reduced sensitivities to cisplatin play a role in its effectiveness within a site of tumor growth. Being exposed to sub-lethal doses will induce changes in gene expression that contribute to the tumour cell's ability to survive and eventually contribute to the selective pressures leading to cisplatin resistance. Such changes in gene expression, therefore, may contribute to cytoprotective mechanisms. Here, we report on studies designed to uncover how tumour cells respond to sub-lethal doses of cisplatin. A microarray study revealed changes in gene expressions that occurred when A549 cells were exposed to a no-observed-effect level (NOEL) of cisplatin (e.g. the IC10). These data were integrated with results from a genome-wide siRNA screen looking for novel therapeutic targets that when inhibited transformed a NOEL of cisplatin into one that induced significant increases in lethality. Pathway analyses were performed to identify pathways that could be targeted to enhance cisplatin activity. We found that over 100 genes were differentially expressed when A549 cells were exposed to a NOEL of cisplatin. Pathways associated with apoptosis and DNA repair were activated. The siRNA screen revealed the importance of the hedgehog, cell cycle regulation, and insulin action pathways in A549 cell survival and response to cisplatin treatment. Results from both datasets suggest that RRM2B, CABYR, ALDH3A1, and FHL2 could be further explored as cisplatin-enhancing gene targets. Finally, pathways involved in repairing double-strand DNA breaks and INO80 chromatin remodeling were enriched in both datasets, warranting further research into combinations of cisplatin and therapeutics targeting these pathways.


Subject(s)
Antineoplastic Agents/chemistry , Carcinoma, Non-Small-Cell Lung/metabolism , Cisplatin/chemistry , Drug Resistance, Neoplasm , Lung Neoplasms/metabolism , RNA, Small Interfering/metabolism , Calcium-Binding Proteins/genetics , Cell Cycle Proteins/genetics , Cell Line, Tumor/drug effects , Chromatin/metabolism , DNA Breaks, Double-Stranded , DNA Repair , Drug Screening Assays, Antitumor , Gene Expression Profiling , Gene Expression Regulation, Neoplastic , Gene Silencing , Humans , Phosphoproteins/genetics , Ribonucleotide Reductases/genetics
7.
Br J Sports Med ; 50(3): 172-5, 2016 Feb.
Article in English | MEDLINE | ID: mdl-26701921

ABSTRACT

BACKGROUND: The incidence of homicide-related death among individuals of college age in the United States population is estimated at 15.5/100,000. The incidence of homicide among National Collegiate Athletic Association (NCAA) athletes is unknown. AIM: To investigate the rate of homicide-related death in NCAA athletes and to identify associated risk factors. METHODS: The NCAA Resolutions list, NCAA catastrophic insurance claims, media reports, and published NCAA demographic data were used to identify student athlete deaths and total participant seasons from 2003-04 through 2012-13. Homicide-related deaths were analysed by sex, race, division, sport, method, location, and circumstance. Internet searches were used to gather case details. RESULTS: Forty-two cases of homicide-related death were identified from 4,242,519 individual participant seasons during the ten-year study period. The incidence of homicide-related death in NCAA athletes was 1.0/100,000. The incidence in males was 1.45/100,000 and in females was 0.4/100,000 (relative risk (RR) 2.9, p=0.01). The incidence in black athletes was 4.2/100,000 and in white athletes was 0.4/100,000 (RR 7.0, p<0.001). The highest sport-specific homicide-related death rate was in American football (3.7/100,000), with a RR of 4.4 (p=0.002) compared to all other sports. 88% of cases occurred off-campus. 38% of cases occurred at a social gathering, and 38% of cases occurred in a place of residence. 74% involved a fatal shooting. CONCLUSIONS: Homicide-related deaths in NCAA athletes occur most commonly in males, black athletes, and American football players. Understanding the incidence, risk factors, and circumstances of homicide-related deaths in college athletes may assist NCAA institutions in developing preventative measures. TRIAL REGISTRATION NUMBER: University of Washington Human Subjects Application, HSD No. 42077.


Subject(s)
Athletes/statistics & numerical data , Homicide/statistics & numerical data , Black or African American , Female , Football , Humans , Male , Sports , Students/statistics & numerical data , United States , Universities , White People
8.
Breast Cancer Res ; 17: 4, 2015 Jan 09.
Article in English | MEDLINE | ID: mdl-25572802

ABSTRACT

INTRODUCTION: The extracellular signals regulating mammary epithelial cell growth are of relevance to understanding the pathophysiology of mammary epithelia, yet they remain poorly characterized. In this study, we applied an unbiased approach to understanding the functional role of signalling molecules in several models of normal physiological growth and translated these results to the biological understanding of breast cancer subtypes. METHODS: We developed and utilized a cytogenetically normal clonal line of hTERT immortalized human mammary epithelial cells in a fibroblast-enhanced co-culture assay to conduct a genome-wide small interfering RNA (siRNA) screen for evaluation of the functional effect of silencing each gene. Our selected endpoint was inhibition of growth. In rigorous postscreen validation processes, including quantitative RT-PCR, to ensure on-target silencing, deconvolution of pooled siRNAs and independent confirmation of effects with lentiviral short-hairpin RNA constructs, we identified a subset of genes required for mammary epithelial cell growth. Using three-dimensional Matrigel growth and differentiation assays and primary human mammary epithelial cell colony assays, we confirmed that these growth effects were not limited to the 184-hTERT cell line. We utilized the METABRIC dataset of 1,998 breast cancer patients to evaluate both the differential expression of these genes across breast cancer subtypes and their prognostic significance. RESULTS: We identified 47 genes that are critically important for fibroblast-enhanced mammary epithelial cell growth. This group was enriched for several axonal guidance molecules and G protein-coupled receptors, as well as for the endothelin receptor PROCR. The majority of genes (43 of 47) identified in two dimensions were also required for three-dimensional growth, with HSD17B2, SNN and PROCR showing greater than tenfold reductions in acinar formation. Several genes, including PROCR and the neuronal pathfinding molecules EFNA4 and NTN1, were also required for proper differentiation and polarization in three-dimensional cultures. The 47 genes identified showed a significant nonrandom enrichment for differential expression among 10 molecular subtypes of breast cancer sampled from 1,998 patients. CD79A, SERPINH1, KCNJ5 and TMEM14C exhibited breast cancer subtype-independent overall survival differences. CONCLUSION: Diverse transmembrane signals are required for mammary epithelial cell growth in two-dimensional and three-dimensional conditions. Strikingly, we define novel roles for axonal pathfinding receptors and ligands and the endothelin receptor in both growth and differentiation.


Subject(s)
Breast Neoplasms/genetics , Breast Neoplasms/metabolism , Cell Membrane/metabolism , Epithelial Cells/metabolism , RNA Interference , Signal Transduction , Adult , Animals , Breast Neoplasms/pathology , Cell Communication , Cell Differentiation , Cell Line, Transformed , Cell Proliferation , Cell Transformation, Neoplastic/genetics , Cell Transformation, Neoplastic/metabolism , Cluster Analysis , Coculture Techniques , Female , Fibroblasts/metabolism , Gene Expression Profiling/methods , Gene Expression Regulation, Neoplastic , Gene Regulatory Networks , Genome-Wide Association Study/methods , High-Throughput Screening Assays , Humans , Karyotype , Mice , RNA, Small Interfering/genetics , Spheroids, Cellular , Telomerase/genetics , Tumor Cells, Cultured , Young Adult
9.
PLoS One ; 9(4): e93749, 2014.
Article in English | MEDLINE | ID: mdl-24727734

ABSTRACT

Along with the increasing need for living-donor liver transplantation (LDLT), the issue of organ shortage has become a serious problem. Therefore, the use of organs from elderly donors has been increasing. While the short-term results of LDLT have greatly improved, problems affecting the long-term outcome of transplant patients remain unsolved. Furthermore, since contradictory data have been reported with regard to the relationship between donor age and LT/LDLT outcome, the question of whether the use of elderly donors influences the long-term outcome of a graft after LT/LDLT remains unsettled. To address whether hepatocyte telomere length reflects the outcome of LDLT, we analyzed the telomere lengths of hepatocytes in informative biopsy samples from 12 paired donors and recipients (grafts) of pediatric LDLT more than 5 years after adult-to-child LDLT because of primary biliary atresia, using quantitative fluorescence in situ hybridization (Q-FISH). The telomere lengths in the paired samples showed a robust relationship between the donor and grafted hepatocytes (r = 0.765, p = 0.0038), demonstrating the feasibility of our Q-FISH method for cell-specific evaluation. While 8 pairs showed no significant difference between the telomere lengths for the donor and the recipient, the other 4 pairs showed significantly shorter telomeres in the recipient than in the donor. Multiple regression analysis revealed that the donors in the latter group were older than those in the former (p = 0.001). Despite the small number of subjects, this pilot study indicates that donor age is a crucial factor affecting telomere length sustainability in hepatocytes after pediatric LDLT, and that the telomeres in grafted livers may be elongated somewhat longer when the grafts are immunologically well controlled.


Subject(s)
In Situ Hybridization, Fluorescence/methods , Liver Transplantation/adverse effects , Living Donors , Telomere/genetics , Adult , Age Factors , Child , Female , Hepatocytes/metabolism , Humans , Infant , Male
10.
Hum Pathol ; 45(3): 473-80, 2014 Mar.
Article in English | MEDLINE | ID: mdl-24411948

ABSTRACT

Chromosomal and genomic instability due to telomere dysfunction is known to play an important role in carcinogenesis. To study telomere shortening in the epidermis surrounding actinic keratosis, we measured telomere lengths of basal, parabasal, and suprabasal cells in epidermis with actinic keratosis (actinic keratosis group, n = 18) and without actinic keratosis (sun-protected, n = 15, and sun-exposed, n = 13 groups) and in actinic keratosis itself as well as in dermal fibroblasts in the 3 groups, using quantitative fluorescence in situ hybridization. Among the 3 cell types, telomeres of basal cells were not always the longest, suggesting that tissue stem cells are not necessarily located among basal cells. Telomeres of basal cells in the sun-exposed group were shorter than those in the sun-protected group. Telomeres in the background of actinic keratosis and in actinic keratosis itself and those of fibroblasts in actinic keratosis were significantly shorter than those in the controls. Our findings demonstrate that sun exposure induces telomere shortening and that actinic keratosis arises from epidermis with shorter telomeres despite the absence of any histologic atypia.


Subject(s)
In Situ Hybridization, Fluorescence/methods , Keratosis, Actinic/metabolism , Skin Aging/genetics , Skin/metabolism , Telomere Shortening/genetics , Telomere/metabolism , Aged , Female , Humans , Keratosis, Actinic/genetics , Keratosis, Actinic/pathology , Male , Middle Aged , Skin/pathology , Skin Aging/pathology , Telomere/pathology
11.
Environ Sci Technol ; 48(3): 1443-50, 2014.
Article in English | MEDLINE | ID: mdl-24410023

ABSTRACT

Hydrogen peroxide (H2O2) and organic peroxides play an important role in atmospheric chemistry, but knowledge of their abundances, sources, and sinks from heterogeneous processes remains incomplete. Here we report the measurement results obtained in four seasons during 2011-2012 at a suburban site and a background site in Hong Kong. Organic peroxides were found to be more abundant than H2O2, which is in contrast to most previous observations. Model calculations with a multiphase chemical mechanism suggest important contributions from heterogeneous processes (primarily transition metal ion [TMI]-HOx reactions) to the H2O2 budget, accounting for about one-third and more than half of total production rate and loss rate, respectively. In comparison, they contribute much less to organic peroxides. The fast removal of H2O2 by these heterogeneous reactions explains the observed high organic peroxide fractions. Sensitivity analysis reveals that the role of heterogeneous processes depends on the abundance of soluble metals in aerosol, serving as a net H2O2 source at low metal concentrations, but as a net sink with high metal loading. The findings of this study suggest the need to consider the chemical processes in the aerosol aqueous phase when examining the chemical budget of gas-phase H2O2.


Subject(s)
Air Pollutants/analysis , Environmental Monitoring/methods , Models, Chemical , Peroxides/analysis , Volatile Organic Compounds/analysis , Aerosols , Computer Simulation , Hong Kong , Hydrogen Peroxide/analysis , Metals/analysis , Photochemical Processes , Seasons , Tropical Climate
12.
Urol Oncol ; 32(2): 135-45, 2014 Feb.
Article in English | MEDLINE | ID: mdl-23510865

ABSTRACT

PURPOSE: Evaluation of the relationships existing among 3 histologic types of urothelial tumors, chromosomal instability, and telomere length. PATIENTS AND METHODS: We examined 37 consecutive cases of papillary urothelial neoplasm, from which 26 (70.3%) were suitable for karyotype analysis, comprising 7 papillary urothelial neoplasms of low malignant potential (PUNLMPs), 10 low-grade papillary urothelial carcinomas (PUCs), and 9 high-grade PUCs. We performed karyotype and anaphase bridge analyses, and measured telomere lengths by quantitative fluorescence in situ hybridization. RESULTS: PUNLMPs were always diploid and had anaphase bridges. Low-grade PUCs showed diploidy (n = 2), hypoploidy (n = 4) and polyploidy (n = 4), and high-grade PUCs showed diploidy (n = 1) and polyploidy (n = 8); both had anaphase bridges. The incidence of anaphase bridges did not differ significantly between PUNLMPs and high-grade PUCs (P = 0.105). The telomere lengths of PUNLMP, low-grade PUC, and high-grade PUC, expressed as mean telomere fluorescence units (TFU) ± SD, were 7906 ± 3197, 4893 ± 1567, and 3299 ± 1406, respectively. The differences among the 3 groups were significant. However, 42.9% of the PUNLMPs had shorter telomeres than the mean value for low-grade PUCs, and 30.0% of the low-grade PUCs had shorter telomeres than those for high-grade PUCs. There was an inverse correlation between telomere length and the incidence of anaphase bridges. CONCLUSIONS: PUNLMP appears to progress to low-grade PUC and high-grade PUC in association with telomere shortening and chromosomal instability. Our data suggest that critically shortened telomeres cause chromosomal instability during progression of papillary urothelial neoplasms.


Subject(s)
Aneuploidy , Carcinoma, Papillary/genetics , Carcinoma, Transitional Cell/genetics , Chromosomal Instability , Telomere Shortening , Urologic Neoplasms/genetics , Aged , Aged, 80 and over , Anaphase/genetics , Carcinoma, Papillary/pathology , Carcinoma, Transitional Cell/pathology , Cell Transformation, Neoplastic/genetics , Cytogenetic Analysis , Disease Progression , Humans , In Situ Hybridization, Fluorescence , Karyotype , Middle Aged , Spectral Karyotyping , Telomere , Urologic Neoplasms/pathology
13.
Gene ; 533(1): 199-207, 2014 Jan 01.
Article in English | MEDLINE | ID: mdl-24080483

ABSTRACT

Trisomies 18 and 21 are genetic disorders in which cells possess an extra copy of each of the relevant chromosomes. Individuals with these disorders who survive birth generally have a shortened life expectancy. As telomeres are known to play an important role in the maintenance of genomic integrity by protecting the chromosomal ends, we conducted a study to determine whether there are differences in telomere length at birth between individuals with trisomy and diploidy, and between trisomic chromosomes and normal chromosomes. We examined samples of peripheral blood lymphocytes (PBLs) from 31 live neonates (diploidy: 10, trisomy 18: 10, trisomy 21: 11) and estimated the telomere length of each chromosome arm using Q-FISH. We observed that the telomeres of trisomic chromosomes were neither shorter nor longer than the mean telomere length of chromosomes as a whole among subjects with trisomies 18 and 21 (intra-cell comparison), and we were unable to conclude that there were differences in telomere length between 18 trisomy and diploid subjects, or between 21 trisomy and diploid subjects (inter-individual comparison). Although it has been reported that telomeres are shorter in older individuals with trisomy 21 and show accelerated telomere shortening with age, our data suggest that patients with trisomies 18 and 21 may have comparably sized telomeres. Therefore, it would be advisable for them to avoid lifestyle habits and characteristics such as obesity, cigarette smoking, chronic stress, and alcohol intake, which lead to marked telomere shortening.


Subject(s)
Chromosomes, Human, Pair 18 , Down Syndrome/genetics , In Situ Hybridization, Fluorescence/methods , Telomere , Trisomy , Calibration , Diploidy , Humans , Infant, Newborn , Karyotyping
14.
Tissue Cell ; 45(6): 407-13, 2013 Dec.
Article in English | MEDLINE | ID: mdl-23928219

ABSTRACT

Here we attempted to clarify telomere metabolism in parental cells and their derived clonal human induced pluripotent stem cells (iPSCs) at different passages using quantitative fluorescence in situ hybridization (Q-FISH). Our methodology involved estimation of the individual telomere lengths of chromosomal arms in individual cells within each clone in relation to telomere fluorescence units (TFUs) determined by Q-FISH. TFUs were very variable within the same metaphase spread and within the same cell. TFUs of the established iPSCs derived from human amnion (hAM933 iPSCs), expressed as mean values of the median TFUs of 20 karyotypes, were significantly longer than those of the parental cells, although the telomere extension rates varied quite significantly among the clones. Twenty metaphase spreads from hAM933 iPSCs demonstrated no chromosomal instability. The iPSCs established from fetal lung fibroblasts (MRC-5) did not exhibit telomere shortening and chromosomal instability as the number of passages increased. However, the telomeres of other iPSCs derived from MRC-5 became shorter as the number of passages increased, and one (5%) of 20 metaphase spreads showed chromosomal abnormalities including X trisomy at an early stage and all 20 showed abnormalities including X and 12 trisomies at the late stage.


Subject(s)
In Situ Hybridization, Fluorescence/methods , Induced Pluripotent Stem Cells/cytology , Telomere Homeostasis/genetics , Telomere/genetics , Chromosomes, Human, Pair 12/genetics , Chromosomes, Human, X/genetics , Humans , Karyotyping , Telomerase/genetics , Trisomy/genetics
15.
PLoS One ; 8(5): e63860, 2013.
Article in English | MEDLINE | ID: mdl-23667679

ABSTRACT

Chromoendoscopy with Lugol iodine staining provides important information on the development of squamous cell carcinoma (SCC). In particular, distinct iodine-unstained lesions (DIULs) larger than 10 mm show a high prevalence in high-grade intraepithelial neoplasia. It has also been reported that inactive ALDH2*1/*2 and less-active ADH1B*1/*1, and smoking, are risk factors for esophageal SCC. We previously examined telomere shortening in the esophageal epithelium of alcoholics, and suggested a high prevalence of chromosomal instability in such individuals. In the present study, we attempted to analyze telomere lengths in 52 DIULs with reference to both their size and multiplicity, ALDH2 and ADH1B genotypes, and smoking history. Patients with DIULs <10 mm (n = 42) had significantly longer telomeres than those with DIULs ≥10 mm (n = 10, p = 0.008). No significant differences in telomere length were recognized between the ALDH2 and ADH1B genotypes (ALDH2 active/inactive = 35/17, ADH1B active/inactive = 32/20; p = 0.563, 0.784, respectively) or among four groups of patients divided according to smoking history (never-, ex-, light, and heavy smokers = 3, 6, 21, and 22 patients, respectively; p = 0.956). Patients without multiple DIULs (n = 17) had significantly longer telomeres than patients with multiple DIULs (n = 35, p = 0.040). It is suggested that alcoholism reduces telomere length in the esophagus, irrespective of genotype or smoking habit. Telomere shortening may not generate cancer directly, but may create conditions under which SCC can develop more easily, depending on subsequent exposure to carcinogens.


Subject(s)
Alcoholics , Aldehyde Dehydrogenase/genetics , Asian People/genetics , Esophagus/pathology , Smoking/genetics , Telomere Shortening/genetics , Adult , Aged , Aged, 80 and over , Aldehyde Dehydrogenase 1 Family , Aldehyde Dehydrogenase, Mitochondrial , Centromere/metabolism , Chi-Square Distribution , Epithelium/metabolism , Epithelium/pathology , Esophagoscopy , Esophagus/metabolism , Genotype , Humans , Iodine , Male , Middle Aged , Staining and Labeling
16.
Int J Oncol ; 42(5): 1589-96, 2013 May.
Article in English | MEDLINE | ID: mdl-23467725

ABSTRACT

The human epidermal growth factor receptor 2 (HER2) proto-oncogene plays an important role in the development and progression of breast and gastric cancer. Monitoring of the HER2 status and treatment with trastuzumab was performed initially in breast cancer, and subsequently in gastric cancer. However, the HER2 status of thyroid cancer remains unexplored. Telomere alteration and telomerase activity have been observed in most human cancers and are known to be a feature of malignancy. The aims of this study were to clarify the HER2 status of thyroid cancer and to examine any correlations to various characteristics of malignancy. We investigated 69 cases of differentiated thyroid cancers with reference to: i) telomere length as measured using tissue quantitative fluorescence in situ hybridization (Q-FISH), ii) expression of human telomerase reverse transcriptase (hTERT) as determined by immunohistochemistry (IHC), and iii) overexpression of the HER2 protein as determined by IHC and amplification of the HER2 gene as determined by fluorescence in situ hybridization (FISH). The telomeres of thyroid cancers, especially follicular carcinomas, were significantly shorter compared to those of adjacent normal tissues. Positivity for hTERT expression and HER2 amplification were observed in approximately 70 and 22% of thyroid cancers, respectively. Our data demonstrated that telomeres in HER2-positive cancers were significantly shorter compared to those in HER2-negative cancers. These results suggest that highly malignant differentiated thyroid cancer can be detected by monitoring HER2 status and telomere shortening, and that trastuzumab therapy may be effective for refractory thyroid cancer.


Subject(s)
Receptor, ErbB-2/genetics , Telomere Shortening/genetics , Thyroid Neoplasms/drug therapy , Thyroid Neoplasms/genetics , Adult , Aged , Antibodies, Monoclonal, Humanized/administration & dosage , Cell Differentiation/genetics , Female , Gene Amplification/genetics , Gene Expression Regulation, Neoplastic/drug effects , Humans , In Situ Hybridization, Fluorescence , Male , Middle Aged , Proto-Oncogene Mas , Receptor, ErbB-2/metabolism , Thyroid Neoplasms/pathology , Trastuzumab
17.
Nat Methods ; 9(11): 1107-12, 2012 Nov.
Article in English | MEDLINE | ID: mdl-23042453

ABSTRACT

DNA rearrangements such as sister chromatid exchanges (SCEs) are sensitive indicators of genomic stress and instability, but they are typically masked by single-cell sequencing techniques. We developed Strand-seq to independently sequence parental DNA template strands from single cells, making it possible to map SCEs at orders-of-magnitude greater resolution than was previously possible. On average, murine embryonic stem (mES) cells exhibit eight SCEs, which are detected at a resolution of up to 23 bp. Strikingly, Strand-seq of 62 single mES cells predicts that the mm 9 mouse reference genome assembly contains at least 17 incorrectly oriented segments totaling nearly 1% of the genome. These misoriented contigs and fragments have persisted through several iterations of the mouse reference genome and have been difficult to detect using conventional sequencing techniques. The ability to map SCE events at high resolution and fine-tune reference genomes by Strand-seq dramatically expands the scope of single-cell sequencing.


Subject(s)
Sequence Analysis, DNA/methods , Sister Chromatid Exchange , Templates, Genetic , Animals , Cells, Cultured , Genomics , Mice
18.
PLoS Genet ; 8(5): e1002696, 2012.
Article in English | MEDLINE | ID: mdl-22661914

ABSTRACT

Telomerase activity is readily detectable in extracts from human hematopoietic stem and progenitor cells, but appears unable to maintain telomere length with proliferation in vitro and with age in vivo. We performed a detailed study of the telomere length by flow FISH analysis in leukocytes from 835 healthy individuals and 60 individuals with reduced telomerase activity. Healthy individuals showed a broad range in average telomere length in granulocytes and lymphocytes at any given age. The average telomere length declined with age at a rate that differed between age-specific breakpoints and between cell types. Gender differences between leukocyte telomere lengths were observed for all cell subsets studied; interestingly, this trend could already be detected at birth. Heterozygous carriers for mutations in either the telomerase reverse transcriptase (hTERT) or the telomerase RNA template (hTERC) gene displayed striking and comparable telomere length deficits. Further, non-carrier relatives of such heterozygous individuals had somewhat shorter leukocyte telomere lengths than expected; this difference was most profound for granulocytes. Failure to maintain telomere homeostasis as a result of partial telomerase deficiency is thought to trigger cell senescence or cell death, eventually causing tissue failure syndromes. Our data are consistent with these statements and suggest that the likelihood of similar processes occurring in normal individuals increases with age. Our work highlights the essential role of telomerase in the hematopoietic system and supports the notion that telomerase levels in hematopoietic cells, while limiting and unable to prevent overall telomere shortening, are nevertheless crucial to maintain telomere homeostasis with age.


Subject(s)
Aging , Hematopoietic Stem Cells , Mutation , RNA/genetics , Sex Characteristics , Telomerase/genetics , Telomere Homeostasis , Adolescent , Adult , Aged , Aged, 80 and over , Cell Death/genetics , Cellular Senescence/genetics , Child , Child, Preschool , Granulocytes/cytology , Hematopoietic Stem Cells/cytology , Heterozygote , Humans , Infant , Lymphocytes/cytology , Middle Aged , Telomere/genetics , Telomere Homeostasis/genetics , Young Adult
19.
World J Surg ; 36(4): 908-16, 2012 Apr.
Article in English | MEDLINE | ID: mdl-22311140

ABSTRACT

BACKGROUND: Liver transplantation for biliary atresia is indicated whenever a Kasai portoenterostomy is considered unfeasible. However, the timing of liver transplantation in biliary atresia has not been precisely defined. Excessive shortening of hepatocellular telomeres may occur in patients with biliary atresia, and therefore, telomere length could be a predictor of hepatocellular reserve capacity. METHODS: Hepatic tissues were obtained from 20 patients with biliary atresia who underwent LT and 10 age-matched autopsied individuals (mean age, 1.7 and 1.2 years, respectively). Telomere lengths were measured by Southern blotting and quantitative fluorescence in situ hybridization using the normalized telomere-centromere ratio. The correlation between the normalized telomere-centromere ratio for the hepatocytes in biliary atresia and the pediatric end-stage liver disease score was analyzed. RESULTS: The median terminal restriction fragment length of the hepatic tissues in biliary atresia was not significantly different from that of the control (p = 0.425), whereas the median normalized telomere-centromere ratio of hepatocytes in biliary atresia was significantly smaller than that of the control (p < 0.001). Regression analysis demonstrated a negative correlation of the normalized telomere-centromere ratio with the pediatric end-stage liver disease score in biliary atresia (p < 0.001). CONCLUSIONS: Telomere length analysis using quantitative fluorescence in situ hybridization could be an objective indicator of hepatocellular reserve capacity in patients with biliary atresia, and excessive telomere shortening supports the early implementation of liver transplantation.


Subject(s)
Biliary Atresia/genetics , Biliary Atresia/surgery , Hepatocytes/pathology , In Situ Hybridization, Fluorescence , Liver/pathology , Telomere Shortening , Biliary Atresia/pathology , Child , Child, Preschool , Female , Humans , Infant , Liver Transplantation , Male
20.
J Oral Pathol Med ; 41(5): 372-8, 2012 May.
Article in English | MEDLINE | ID: mdl-22122732

ABSTRACT

OBJECTIVES: A precancerous condition is a lesion that, if left untreated, leads to cancer or can be induced to become malignant. In the oral region, leukoplakia is a lesion that has been regarded as precancerous. In cases of oral carcinoma, we have frequently noticed that a type of leukoplakia histologically demonstrating hyper-orthokeratosis and mild atypia (ortho-keratotic dysplasia; OKD) is often associated with carcinoma, either synchronously or metachronously. Therefore, we consider OKD-type leukoplakia to be a true precancerous lesion. MATERIALS AND METHODS: In an attempt to clarify the relationship between OKD as a precancerous condition in the oral mucosa and telomere length, we estimated telomere lengths in this type of leukoplakia using quantitative fluorescence in situ hybridization, and also quantified the frequency of anaphase-telophase bridges (ATBs) in comparison with squamous cell carcinoma in situ (CIS) and the background tissues of CIS and OKD. RESULTS: Ortho-keratotic dysplasia was frequently associated with squamous cell carcinoma (45.0%) and showed significantly shorter telomeres than normal control epithelium, CIS, or the background of CIS or OKD. The frequency of ATBs was much higher in OKD than in control epithelium or CIS. CONCLUSION: Ortho-keratotic dysplasia appears to be frequently associated with carcinoma, chromosomal instability, and excessively shortened telomeres, not only in the lesion itself but also in the surrounding background. Therefore, when this type of leukoplakia is recognized in the oral region, strict follow-up for oral squamous cell carcinoma is necessary, focusing not only on the areas of leukoplakia, but also the surrounding background.


Subject(s)
Carcinoma, Squamous Cell/pathology , Chromosomal Instability , Leukoplakia, Oral/pathology , Mouth Neoplasms/pathology , Telomere Shortening , Adult , Aged , Carcinoma, Squamous Cell/genetics , Female , Humans , In Situ Hybridization, Fluorescence , Keratosis , Leukoplakia, Oral/genetics , Male , Middle Aged , Mouth Neoplasms/genetics , Mouth Neoplasms/prevention & control , Precancerous Conditions/genetics , Precancerous Conditions/pathology
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