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Nat Commun ; 12(1): 3194, 2021 05 27.
Article in English | MEDLINE | ID: mdl-34045455

ABSTRACT

The synthetic pathways of life's building blocks are envisaged to be through a series of complex prebiotic reactions and processes. However, the strategy to compartmentalize and concentrate biopolymers under prebiotic conditions remains elusive. Liquid-liquid phase separation is a mechanism by which membraneless organelles form inside cells, and has been hypothesized as a potential mechanism for prebiotic compartmentalization. Associative phase separation of oppositely charged species has been shown to partition RNA, but the strongly negative charge exhibited by RNA suggests that RNA-polycation interactions could inhibit RNA folding and its functioning inside the coacervates. Here, we present a prebiotically plausible pathway for non-associative phase separation within an evaporating all-aqueous sessile droplet. We quantitatively investigate the kinetic pathway of phase separation triggered by the non-uniform evaporation rate, together with the Marangoni flow-driven hydrodynamics inside the sessile droplet. With the ability to undergo liquid-liquid phase separation, the drying droplets provide a robust mechanism for formation of prebiotic membraneless compartments, as demonstrated by localization and storage of nucleic acids, in vitro transcription, as well as a three-fold enhancement of ribozyme activity. The compartmentalization mechanism illustrated in this model system is feasible on wet organophilic silica-rich surfaces during early molecular evolution.


Subject(s)
Biopolymers/chemistry , Evolution, Molecular , Origin of Life , RNA/chemistry , Aptamers, Nucleotide/chemistry , DNA/chemistry , DNA-Directed RNA Polymerases/metabolism , Enzyme Assays , Hydrodynamics , Kinetics , Polyelectrolytes/chemistry , RNA/biosynthesis , RNA Folding , RNA, Catalytic/metabolism , Transcription, Genetic , Viral Proteins/metabolism
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