Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 20
Filter
Add more filters










Publication year range
1.
J Viral Hepat ; 23(7): 496-505, 2016 07.
Article in English | MEDLINE | ID: mdl-26840694

ABSTRACT

Chronic hepatitis C virus (HCV) infection can now be treated with oral directly acting antiviral agents, either with or without ribavirin (RBV). Virologic relapse after treatment can occur, and in some studies was more common in cirrhotic subjects. We previously observed changes in hepatic immunity during interferon (IFN)-free therapy that correlated with favourable outcome in subjects with early liver disease. Here, we compared changes in endogenous IFN pathways during IFN-free, RBV-free therapy between cirrhotic and noncirrhotic subjects. mRNA and microRNA (miRNA) expression analyses were performed on paired pre- and post-treatment liver biopsies from genotype-1 HCV subjects treated with sofosbuvir/ledipasvir (SOF/LDV) for 12 weeks (n = 4, 3 cirrhotics) or SOF/LDV combined with GS-9669 or GS-9451 for 6 weeks (n = 6, 0 cirrhotics). Nine of ten subjects achieved a sustained virologic response (SVR), while one noncirrhotic subject relapsed. Hepatic IFN-stimulated gene expression decreased with treatment in the liver of all subjects, with no observable impact of cirrhosis. Hepatic gene expression of type III IFNs (IFNL1, IFNL3, IFNL4-ΔG) similarly decreased with treatment, while IFNA2 expression, undetectable in all subjects pretreatment, was detected post-treatment in three subjects who achieved a SVR. Only the subject who relapsed had detectable IFNL4-ΔG expression in post-treatment liver. Other IFNs had no change in gene expression (IFNG, IFNB1, IFNA5) or could not be detected. Although expression of multiple hepatic miRNAs changed with treatment, many miRNAs previously implicated in HCV replication and IFN signalling had unchanged expression. In conclusion, favourable treatment outcome during IFN-free HCV therapy is associated with changes in the host IFN response regardless of cirrhosis.


Subject(s)
Antiviral Agents/therapeutic use , Gene Expression Profiling , Hepatitis C, Chronic/drug therapy , Hepatitis C, Chronic/pathology , Interferons/analysis , Sustained Virologic Response , Female , Hepatitis C, Chronic/diagnosis , Humans , Male , MicroRNAs/analysis , Middle Aged , Prognosis , Prospective Studies , RNA, Messenger/analysis , Sequence Analysis, DNA , Treatment Outcome
3.
J Clin Microbiol ; 38(10): 3561-71, 2000 Oct.
Article in English | MEDLINE | ID: mdl-11015364

ABSTRACT

Human louse-borne relapsing fever occurs in sporadic outbreaks in central and eastern Africa that are characterized by significant morbidity and mortality. Isolates of the causative agent, Borrelia recurrentis, were obtained from the blood of four patients during a recent epidemic of the disease in southern Sudan. The glpQ gene, encoding glycerophosphodiester phosphodiesterase, from these isolates was sequenced and compared with the glpQ sequences obtained from other relapsing-fever spirochetes. Previously we showed that GlpQ of Borrelia hermsii is an immunogenic protein with utility as a serological test antigen for discriminating tick-borne relapsing fever from Lyme disease. In the present work, we cloned and expressed the glpQ gene from B. recurrentis and used recombinant GlpQ in serological tests. Acute- and convalescent-phase serum samples obtained from 42 patients with louse-borne relapsing fever were tested with an indirect immunofluorescence assay (IFA) and an enzyme-linked immunosorbent assay (ELISA) that used whole cells of B. recurrentis and with immunoblotting to whole-cell lysates of the spirochete and Escherichia coli producing recombinant GlpQ. The geometric mean titers of the acute- and convalescent-phase serum samples measured by IFA were 1:83 and 1:575, respectively. The immunoblot analysis identified a high level of reactivity and seroconversion to GlpQ, and the assay was more sensitive than the whole-cell IFA and ELISA using purified, recombinant histidine-tagged GlpQ. Serum antibodies to GlpQ and other antigens persisted for 27 years in one patient. We conclude that assessment of anti-GlpQ antibodies will allow serological confirmation of louse-borne relapsing fever and determination of disease prevalence.


Subject(s)
Bacterial Proteins/genetics , Borrelia Infections/diagnosis , Borrelia/classification , Phosphoric Diester Hydrolases/genetics , Phthiraptera/microbiology , Amino Acid Sequence , Animals , Bacterial Proteins/analysis , Borrelia/genetics , Borrelia/isolation & purification , Borrelia Infections/blood , Cloning, Molecular , Convalescence , DNA Primers , DNA, Bacterial/genetics , Ethiopia , Fluorescent Antibody Technique, Indirect , Humans , Insect Vectors , Phosphoric Diester Hydrolases/analysis , Phylogeny , Polymerase Chain Reaction/methods , Sequence Alignment , Sequence Homology, Amino Acid , Serologic Tests
4.
Infect Immun ; 68(9): 4992-5001, 2000 Sep.
Article in English | MEDLINE | ID: mdl-10948116

ABSTRACT

A lipoprotein gene family first identified in Borrelia burgdorferi strain 297, designated 2.9 LP and recently renamed mlp, was found on circular and linear plasmids in the genome sequence of B. burgdorferi strain B31-M1. Sequence analyses of the B31 mlp genes and physically linked variant gene families indicated that mlp gene heterogeneity is unique and unrelated to location or linkage to divergent sequences. Evidence of recombination between B31 mlp alleles was also detected. Northern blot analysis of cultured strain B31 indicated that the mlp genes were not expressed at a temperature (23 degrees C) characteristic of that of ticks in the environment. In striking contrast, expression of many mlp genes increased substantially when strain B31 was shifted to 35 degrees C, a temperature change mimicking that occurring in the natural transmission cycle of the spirochete from tick to mammal. Primer extension analysis of the mlp mRNA transcripts suggested that sigma 70-like promoters are involved in mlp expression during temperature shift conditions. Antibodies were made against strain B31 Mlp proteins within the first 4 weeks after experimental mouse infection. Importantly, Lyme disease patients also had serum antibodies reactive with purified recombinant Mlp proteins from strain B31, a result indicating that humans are exposed to Mlp proteins during infection. Taken together, the data indicate that strain B31 mlp genes encode a diverse array of lipoproteins which may participate in early infection processes in the mammalian host.


Subject(s)
Borrelia burgdorferi Group/genetics , Genes, Bacterial , Lipoproteins/genetics , Amino Acid Sequence , Animals , Base Sequence , Blotting, Northern , Borrelia burgdorferi Group/immunology , Humans , Lipoproteins/chemistry , Lipoproteins/immunology , Lyme Disease/blood , Mice , Molecular Sequence Data , Plasmids , Promoter Regions, Genetic , Recombinant Proteins/immunology , Ticks/microbiology
5.
Infect Immun ; 68(7): 3900-8, 2000 Jul.
Article in English | MEDLINE | ID: mdl-10858201

ABSTRACT

Borrelia hermsii, an agent of tick-borne relapsing fever, was found to contain multiple circular plasmids approximately 30 kb in size. Sequencing of a DNA library constructed from circular plasmid fragments enabled assembly of a composite DNA sequence that is homologous to the cp32 plasmid family of the Lyme disease spirochete, B. burgdorferi. Analysis of another relapsing fever bacterium, B. parkeri, indicated that it contains linear homologs of the B. hermsii and B. burgdorferi cp32 plasmids. The B. hermsii cp32 plasmids encode homologs of the B. burgdorferi Mlp and Bdr antigenic proteins and BlyA/BlyB putative hemolysins, but homologs of B. burgdorferi erp genes were absent. Immunoblot analyses demonstrated that relapsing fever patients produced antibodies to Mlp proteins, indicating that those proteins are synthesized by the spirochetes during human infection. Conservation of cp32-encoded genes in different Borrelia species suggests that their protein products serve functions essential to both relapsing fever and Lyme disease spirochetes. Relapsing fever borreliae replicate to high levels in the blood of infected animals, permitting direct detection and possible functional studies of Mlp, Bdr, BlyA/BlyB, and other cp32-encoded proteins in vivo.


Subject(s)
Antigens, Bacterial/genetics , Borrelia burgdorferi Group/genetics , Borrelia burgdorferi Group/immunology , Borrelia burgdorferi , Borrelia/genetics , Borrelia/immunology , Plasmids , Amino Acid Sequence , Animals , Base Sequence , DNA Probes/genetics , DNA, Bacterial/genetics , DNA, Bacterial/isolation & purification , Genes, Bacterial , Humans , Molecular Sequence Data , Open Reading Frames , Sequence Homology, Amino Acid , Species Specificity
6.
FEMS Microbiol Lett ; 175(1): 79-85, 1999 Jun 01.
Article in English | MEDLINE | ID: mdl-10361711

ABSTRACT

A Mycobacterium marinum promoter, designated G13, was isolated from a promoter-trap library as a constitutive producer of the mutant green fluorescent protein. Sequence analysis, primer extension analysis, and computer promoter prediction analysis indicate that the G13 promoter is very similar to Escherichia coli consensus sigma 70 promoters. Expression of the green fluorescent protein from the G13 promoter in M. marinum is, however, up to 40 times higher than that seen from the mycobacterial hsp60 promoter during exponential growth. Further, expression from this promoter does not appear to affect the growth of the organism in culture media or in macrophages. The strong expression of the G13 promoter allows it to be developed as a useful molecular tool for high level expression of markers in vitro.


Subject(s)
DNA-Directed RNA Polymerases/genetics , Escherichia coli/metabolism , Mycobacterium marinum/genetics , Mycobacterium smegmatis/metabolism , Promoter Regions, Genetic/genetics , Sigma Factor/genetics , Amino Acid Sequence , Animals , Base Sequence , DNA, Bacterial/genetics , DNA-Directed RNA Polymerases/metabolism , Green Fluorescent Proteins , Luminescent Proteins/biosynthesis , Macrophages/microbiology , Mice , Molecular Sequence Data , Mycobacterium marinum/growth & development , Mycobacterium marinum/metabolism , RNA, Bacterial/genetics , Sequence Analysis, DNA , Sigma Factor/metabolism
7.
Infect Immun ; 66(6): 2674-83, 1998 Jun.
Article in English | MEDLINE | ID: mdl-9596733

ABSTRACT

Isolated outer membranes of Borrelia burgdorferi were used in immunoblotting experiments with sera from immune mice to identify new putative Lyme disease vaccine candidates. One immunoreactive polypeptide migrated on polyacrylamide gels just proximal to outer surface protein C and comigrated with [3H]palmitate-labeled polypeptides. A degenerate oligonucleotide primer based upon internal amino acid sequence information was used to detect the corresponding gene within a B. burgdorferi total genomic library. The relevant open reading frame (ORF) encoded a polypeptide comprised of a 24-amino-acid putative signal peptide terminated by LLISC, a probable consensus sequence for lipoprotein modification, and a mature protein of 163 amino acids. Immunoblots of a recombinant fusion protein corresponding to this ORF supported the idea that the encoded protein was a previously reported decorin-binding protein (DBP) of B. burgdorferi N40 (B. P. Guo, S. J. Norris, L. C. Rosenberg, and M. Höök, Infect. Immun. 63:3467-3472, 1995). However, further DNA sequencing revealed the presence of a second ORF, designated ORF-1, whose termination codon was 119 bp upstream of the dbp gene. ORF-1 also encoded a putative lipoprotein with a mature length of 167 amino acids. Northern blots, Southern blots, and primer extension analyses indicated that ORF-1 and dbp comprised a two-gene operon located on the 49-kb linear plasmid. Both proteins, which were 40% identical and 56% similar, partitioned into Triton X-114 detergent extracts of B. burgdorferi isolated outer membranes. Mice infected with B. burgdorferi produced high titers of antibodies against the ORF-1-encoded protein and DBP during both early and later stages of chronic infection. Both DBP and the ORF-1-encoded protein were sensitive to proteinase K treatment of intact borreliae, suggesting that they were surface exposed. In active immunization experiments, 78% of mice immunized with recombinant DBP were immune to challenge. While it is not clear whether the two lipoproteins encoded by the ORF-1-dbp operon have analogous decorin-binding functions in vivo, the combined studies implicate DBP as a new candidate for a human Lyme disease vaccine.


Subject(s)
Adhesins, Bacterial , Bacterial Outer Membrane Proteins/genetics , Bacterial Outer Membrane Proteins/therapeutic use , Bacterial Proteins , Borrelia burgdorferi Group/genetics , Carrier Proteins/genetics , Carrier Proteins/therapeutic use , Genes, Bacterial , Lyme Disease/prevention & control , Vaccination , Animals , Antibodies, Bacterial/blood , Bacterial Outer Membrane Proteins/drug effects , Bacterial Outer Membrane Proteins/immunology , Borrelia burgdorferi Group/immunology , Carrier Proteins/drug effects , Carrier Proteins/immunology , Chronic Disease , Cross Reactions , DNA, Bacterial/genetics , Endopeptidase K/pharmacology , Fluorescent Antibody Technique, Indirect , Genomic Library , Mice , Mice, Inbred C3H , Molecular Sequence Data , Operon , Plasmids/genetics , Sequence Homology, Amino Acid
8.
Appl Environ Microbiol ; 63(10): 3933-40, 1997 Oct.
Article in English | MEDLINE | ID: mdl-9327558

ABSTRACT

A microorganism (Dermacantor andersoni symbiont [DAS]) infecting Rocky Mountain wood ticks (D. andersoni) collected in the Bitterroot Mountains of western Montana was characterized as an endosymbiont belonging to the genus Francisella. Previously described as Wolbachia like, the organism's DNA was amplified from both naturally infected tick ovarial tissues and Vero cell cultures by PCR assay with primer sets derived from eubacterial 16S ribosomal DNA (rDNA) and Francisella membrane protein genes. The 16S rDNA gene sequence of the DAS was most similar (95.4%) to that of Francisella tularensis subsp. tularensis. Through a combination of Giménez staining, PCR assay, and restriction fragment length polymorphism analysis, 102 of 108 female ticks collected from 1992 to 1996 were infected. Transovarial transmission to female progeny was 95.6%, but we found no evidence of horizontal transmission.


Subject(s)
Arachnid Vectors/microbiology , Dermacentor/microbiology , Francisella/isolation & purification , Animals , Arachnid Vectors/ultrastructure , Base Sequence , Chlorocebus aethiops , DNA Primers/genetics , DNA, Bacterial/genetics , DNA, Ribosomal/genetics , Dermacentor/ultrastructure , Female , Francisella/genetics , Francisella/ultrastructure , Microscopy, Electron , Ovary/microbiology , Phylogeny , Polymerase Chain Reaction , Polymorphism, Restriction Fragment Length , Symbiosis , Vero Cells
9.
Gene ; 197(1-2): 47-64, 1997 Sep 15.
Article in English | MEDLINE | ID: mdl-9332349

ABSTRACT

We have characterized a 5.2-kilobase (kb) putative transport related operon (tro) locus of Treponema pallidum subsp. pallidum (Nichols strain) (Tp) encoding six proteins: TroA, TroB, TroC, TroD, TroR and Phosphoglycerate mutase (Pgm). Four of these gene products (TroA-TroD) are homologous to members of the ATP-Binding Cassette (ABC) superfamily of bacterial transport proteins. TroA (previously identified as Tromp1) has significant sequence similarity to a family of Gram-negative periplasmic substrate-binding proteins and to a family of streptococcal proteins that may have dual roles as substrate binding proteins and adhesins. TroB is homologous to the ATP-binding protein component, whereas TroC and TroD are related to the hydrophobic membrane protein components of ABC transport systems. TroR is similar to Gram-positive iron-activated repressor proteins (DesR, DtxR, IdeR, and SirR). The last open reading frame (ORF) of the tro operon encodes a protein that is highly homologous to the glycolytic pathway enzyme, Pgm. Primer extension results demonstrated that the tro operon is transcribed from a sigma 70-type promoter element. Northern analysis and reverse transcriptase-polymerase chain reactions provided evidence for the presence of a primary 1-kb troA transcript and a secondary, less abundant, troA-pgm transcript. The tro operon is flanked by a Holliday structure DNA helicase homolog (upstream) and two ORFs representing a purine nucleoside phosphorylase homolog and tpp15, a previously characterized gene encoding a membrane lipoprotein (downstream). The presence of a complex operon containing a putative ABC transport system and a DtxR homolog indicates a possible linkage between transport and gene regulation in Tp.


Subject(s)
ATP-Binding Cassette Transporters/genetics , Operon/genetics , Periplasmic Binding Proteins , Phosphoglycerate Mutase/genetics , Repressor Proteins/genetics , Treponema pallidum/genetics , Amino Acid Sequence , Base Sequence , Cloning, Molecular , Genes, Bacterial/genetics , Iron/pharmacology , Molecular Sequence Data , Open Reading Frames/genetics , Promoter Regions, Genetic/genetics , RNA, Bacterial/analysis , RNA, Messenger/analysis , Restriction Mapping , Sequence Analysis, DNA , Sequence Homology, Amino Acid
10.
J Bacteriol ; 179(13): 4285-91, 1997 Jul.
Article in English | MEDLINE | ID: mdl-9209045

ABSTRACT

We have mapped the genes encoding the antigenic lipoproteins OspE and OspF to an approximately 18-kb circular plasmid in Borrelia burgdorferi N40. Sequencing and restriction mapping have revealed that this plasmid, cp18, is homologous to an 18-kb region of the cp32 circular plasmids found in the Lyme disease spirochetes. Our data show that cp18 may have arisen from an ancestral cp32 plasmid by deletion of a 14-kb region of DNA, indicating that a significant portion of the cp32 plasmid is not essential in cis for plasmid maintenance. These findings suggest that a relatively small recombinant plasmid capable of being stably maintained in B. burgdorferi could be constructed from a cp32 plasmid.


Subject(s)
Antigens, Bacterial/genetics , Bacterial Outer Membrane Proteins/genetics , Bacterial Proteins , Borrelia burgdorferi Group/genetics , Lipoproteins/genetics , Plasmids , Animals , Base Sequence , DNA, Circular , Genes, Bacterial , Molecular Sequence Data , Ticks
11.
Infect Immun ; 65(5): 1701-9, 1997 May.
Article in English | MEDLINE | ID: mdl-9125550

ABSTRACT

The clinical and histopathological manifestations of syphilis and the invasive behavior of Treponema pallidum in tissue culture systems reflect the propensity for treponemes to migrate through skin, hematogenously disseminate, and invade targeted tissues. Treponemal motility is believed to be essential to this process and thereby an important facet of syphilis pathogenesis. By analogy with other bacterial pathogens, it is plausible that treponemal motility and tissue invasion are modulated by sensory transduction events associated with chemotactic responses. Recent studies have demonstrated the existence in T. pallidum of accessory molecules typically associated with sensory transduction events involving methyl-accepting chemotaxis proteins (MCPs). Intrinsic radiolabeling of T. pallidum in vitro with L-[methyl-3H] methionine revealed one methylated treponemal polypeptide with an apparent molecular mass of 64 kDa. A degenerate oligonucleotide probe corresponding to a highly conserved C-terminal domain within Bacillus subtilis and Escherichia coli MCPs was used in Southern blotting of T. pallidum DNA to identify and subsequently clone a putative T. pallidum MCP gene (mcp1). Computer analyses predicted a near-consensus promoter upstream of mcp1, and primer extension analysis employing T. pallidum RNA revealed a transcriptional initiation site. T. pallidum mcp1 encoded a 579-amino-acid (64.6-kDa) polypeptide which was highly homologous to at least 69 other known or putative sensory transducer proteins, with the highest degrees of homology existing between the C terminus of mcp1 and the C-terminal (signaling) domains of the other bacterial MCPs. Other salient features of Mcp1 included (i) six potential membrane-spanning domains at the N terminus, (ii) two predicted alpha-helical coiled coil regions containing at least three putative methylation sites, and (iii) homologies with two ligand-binding domains (LI-1 and LI-2) of the E. coli MCPs Trg and Tar. This study is the first to provide both metabolic and genetic evidence for an MCP sensory transducer in T. pallidum. The combined findings prompt key questions regarding the relationship(s) among sensory transduction, regulation of endoflagellar rotation, and chemotactic responses (in particular, the role of glucose) during virulence expression by T. pallidum.


Subject(s)
Escherichia coli Proteins , Membrane Proteins/genetics , Receptors, Cell Surface , Signal Transduction/genetics , Treponema pallidum/genetics , Amino Acid Sequence , Bacillus subtilis/genetics , Bacterial Proteins/genetics , Base Sequence , Blotting, Southern , Chemoreceptor Cells , Cloning, Molecular , Escherichia coli/genetics , Methyl-Accepting Chemotaxis Proteins , Methylation , Molecular Sequence Data , Plasmids , Promoter Regions, Genetic , Protein Structure, Tertiary , RNA, Bacterial/analysis , Sequence Alignment , Sequence Analysis, DNA , Sequence Homology, Amino Acid , Transcription, Genetic
12.
Infect Immun ; 65(2): 412-21, 1997 Feb.
Article in English | MEDLINE | ID: mdl-9009290

ABSTRACT

Isolated outer membranes of Borrelia burgdorferi 297 were utilized to obtain partial amino acid sequence information for a low-molecular-weight, outer membrane-associated polypeptide. Degenerate oligonucleotide primers based upon this information were used to amplify a 100-bp probe for detection of the corresponding full-length gene within a B. burgdorferi total genomic library. The relevant open reading frame (ORF) encoded a polypeptide comprised of a 17-amino-acid putative signal peptide terminated by LFVAC, a probable consensus sequence for lipoprotein modification, and a mature protein of 51 amino acids (predicted molecular mass of 5.8 kDa). The DNA sequences of the corresponding ORFs in B. burgdorferi 297 and B31 were identical; the corresponding ORF in strain N40 differed by only one nucleotide. Assuming conventional processing and acylation, the molecular weight of the lipoprotein, designated lp6.6, is about 6,600. The lp6.6 gene, which was localized to the 49-kb linear plasmid of B. burgdorferi, subsequently was cloned and expressed in Escherichia coli as a fusion protein with glutathione S-transferase. Immunoblot analysis with monoclonal antibody 240.7 revealed that lp6.6 was identical to a low-molecular-weight, highly conserved B. burgdorferi lipoprotein reported previously (L. I. Katona, G. Beck, and G. S. Habicht, Infect. Immun. 60:4995-5003, 1992). Results of indirect immunofluorescence assays, growth inhibition assays, passive immunizations, and active immunizations indicated that this outer membrane-associated antigen is not surface exposed in B. burgdorferi. Particularly interesting was the finding that mice and rhesus monkeys chronically infected with B. burgdorferi failed to develop antibodies against this antigen. We propose that high-level expression of lp6.6 is associated with the arthropod phase of the spirochetal life cycle and that expression of the gene is downregulated during mammalian infection.


Subject(s)
Bacterial Outer Membrane Proteins/genetics , Borrelia burgdorferi Group/genetics , Gene Expression Regulation, Bacterial/immunology , Lipoproteins/genetics , Lyme Disease/immunology , Amino Acid Sequence , Animals , Antibodies, Bacterial/biosynthesis , Bacterial Outer Membrane Proteins/chemistry , Bacterial Outer Membrane Proteins/immunology , Base Sequence , Blood Bactericidal Activity , Borrelia burgdorferi Group/growth & development , Borrelia burgdorferi Group/immunology , DNA, Bacterial/isolation & purification , Genes, Bacterial , Immunization, Passive , Lipoproteins/chemistry , Lipoproteins/immunology , Lyme Disease/blood , Lyme Disease/microbiology , Mice , Mice, Inbred C3H , Molecular Sequence Data , Molecular Weight , Plasmids/genetics , Vaccination
13.
Gene ; 177(1-2): 115-21, 1996 Oct 24.
Article in English | MEDLINE | ID: mdl-8921855

ABSTRACT

A 38-kDa lipoprotein of Treponema pallidum subsp. pallidum (T. pallidum), the syphilis spirochete, previously was identified as a putative homolog of E. coli MglB [Becker et al. (1994) Infect. Immun. 62, 1381-1391]. In the present study, genome walking in regions adjacent to the T. pallidum 38-kDa lipoprotein gene has identified three contiguous genes (tp-mglB [formerly tpp38], tp-mglA, and tp-mglC) which appear to comprise a mgl-like operon in T. pallidum. A prominent transcript corresponding to tp-mglB, the first gene of the operon which encodes the carbohydrate receptor, is synthesized by T. pallidum along with lesser abundant transcript(s) corresponding to the entire T. pallidum mgl operon. An active promoter 135 bp upstream of tp-mglB is believed to direct mRNA synthesis for the operon. This is the first membrane protein-encoding operon of T. pallidum for which a putative function (glucose import) has been assigned. Furthermore, by analogy with E. coli MglB which interacts with the sensory transducer Trg to induce a chemotactic response, it is possible that T. pallidum also contains a homolog of E. coli Trg or other methyl-accepting chemotaxis proteins. The existence of a mgl operon in T. pallidum thus may have important implications with respect to T. pallidum survival, tissue dissemination, and sensory transduction during virulence expression.


Subject(s)
Bacterial Proteins/genetics , Calcium-Binding Proteins , Membrane Proteins/genetics , Monosaccharide Transport Proteins , Operon , Periplasmic Binding Proteins , Treponema pallidum/genetics , Amino Acid Sequence , Base Sequence , Carrier Proteins/genetics , DNA, Bacterial , Membrane Glycoproteins/genetics , Molecular Sequence Data , Multigene Family , Promoter Regions, Genetic , RNA, Messenger/metabolism , Sequence Homology, Amino Acid , Transcription, Genetic
14.
Microbiology (Reading) ; 142 ( Pt 9): 2481-9, 1996 Sep.
Article in English | MEDLINE | ID: mdl-8828215

ABSTRACT

A 44 kDa protein is a dominant component of periplasmic extracts of Neisseria gonorrhoeae. Peptide sequence generated from a cyanogen-bromide-cleaved fragment of this protein indicated sequence homology with elongation factor-Tu (EF-Tu). Polyclonal antiserum was made against the 44 kDa protein purified from periplasm extracts of N. gonorrhoeae. The preabsorbed antiserum was immunoblotted against whole-cell lysates on two-dimensional gels. A 44 kDa protein and a smaller 37 kDa protein were recognized by this antiserum. A N. gonorrhoeae gamma phage DNA library was screened and a clone expressing a 44 kDa protein was identified. The DNA insert in this clone contained several genes homologous to genes contained in the str operon of Escherichia coli. One ORF product with a calculated molecular mass of 43 kDa was highly homologous to the EF-TuA of E. coli. A synthetic peptide antiserum specific for a portion of the C terminus of EF-Tu confirmed that the 37 kDa protein in whole-cell lysates of N. gonorrhoeae was a processed form of EF-Tu. Deletion of the tufA gene homologue in N. gonorrhoeae was attempted but was unsuccessful.


Subject(s)
Neisseria gonorrhoeae/genetics , Peptide Elongation Factor Tu/genetics , Base Sequence , Blotting, Southern , Cloning, Molecular , Electrophoresis, Gel, Two-Dimensional , Escherichia coli/genetics , Gene Library , Immunoblotting , Molecular Sequence Data , Mutagenesis, Insertional , Neisseria gonorrhoeae/immunology , Peptide Elongation Factor Tu/immunology , Peptide Mapping , Peptides/chemical synthesis , Peptides/immunology , Polymerase Chain Reaction , Reading Frames , Sequence Deletion
15.
J Bacteriol ; 178(11): 3293-307, 1996 Jun.
Article in English | MEDLINE | ID: mdl-8655511

ABSTRACT

DNA sequencing and Southern blot analyses of a Borrelia burgdorferi DNA fragment encoding a signal sequence led to the discovery of a genetic locus, designated 2.9, which appears to be present in at least seven copies in virulent B. burgdorferi 297. DNA sequence analysis of these regions revealed that each 2.9 locus contained an operon of four genes (ABCD) and open reading frames designated rep+ (positive strand) and rep- (negative strand) which encoded multiple repeat motifs. Downstream of the rep+ gene(s) in six of the completely cloned and sequenced 2.9 loci also were lipoprotein (LP) genes possessing highly similar signal sequences but encoding variable mature polypeptides. The lipoproteins could he separated into two classes on the basis of hydrophilicity profiles, sequence similarities, and reactivity with specific antibodies. The 2.9 loci were localized to two (20- and 30-kb) supercoiled plasmids in B. burgdorferi 297. Northern (RNA) blot analysis established that the 2.9 ABCD operon was only minimally expressed, whereas the rep- gene(s) and at least three of the seven LP genes were expressed by B. burgdorferi in vitro. A single putative promoter element was identified by RNA primer extension analysis upstream of the ABCD operon, whereas a number of potential promoter regions existed upstream of the LP genes. The combined data indicate that the ABCD operon, rep+ and rep- genes, and LP genes are separately transcribed during in vitro growth. The 2.9 loci possess a repetitiveness, diversity, and complexity not previously described for B. burgdorferi; differential expression of these genes may facilitate the spirochete's ability to survive in diverse host environments.


Subject(s)
Borrelia burgdorferi Group/genetics , Genes, Bacterial , Lipoproteins/genetics , Multigene Family , Open Reading Frames , Plasmids , Amino Acid Sequence , Base Sequence , Blotting, Northern , Blotting, Southern , Cloning, Molecular , Molecular Sequence Data , Transcription, Genetic
16.
Infect Immun ; 64(5): 1724-35, 1996 May.
Article in English | MEDLINE | ID: mdl-8613384

ABSTRACT

Haemophilus ducreyi exhibits a requirement for exogenously supplied heme for aerobic growth in vitro. Nine of ten wild-type isolates of H. ducreyi were shown to contain a readily detectable hemoglobin-binding activity. Spontaneous hemoglobin-binding-negative mutants of two of these wild-type isolates lost the ability to express an outer membrane protein with an apparent molecular mass of approximately 100 kDa. Similarly, the single wild-type isolate that lacked the ability to bind hemoglobin also appeared to lack expression of this same 100-kDa protein. A monoclonal antibody (5A9) to this 100-kDa protein was used to identify a recombinant clone which possessed an H. ducreyi chromosomal fragment containing the gene encoding the 100-kDa protein; this protein was designated hemoglobin utilization protein A (HupA). Nucleotide sequence analysis of the hupA gene revealed that the predicted protein, with a calculated molecular mass of 108 kDa, was similar to TonB-dependent outer membrane proteins of other bacteria. Increasing the concentration of heme in the growth medium resulted in decreased expression of the HupA protein. Mutant analysis was used to prove that the HupA protein was essential for the utilization by H. ducreyi of both hemoglobin and hemoglobin-haptoglobin as sources of heme in vitro. In addition, it was found that an isogenic hupA mutant was less virulent than the wild-type parent strain in the temperature-dependent rabbit model for dermal lesion production by H. ducreyi.


Subject(s)
Bacterial Outer Membrane Proteins/metabolism , Carrier Proteins/metabolism , Chancroid/metabolism , Haemophilus ducreyi/metabolism , Haemophilus ducreyi/pathogenicity , Hemoglobins/metabolism , Amino Acid Sequence , Animals , Bacterial Outer Membrane Proteins/chemistry , Bacterial Outer Membrane Proteins/genetics , Base Sequence , Carrier Proteins/chemistry , Carrier Proteins/genetics , Chancroid/etiology , Cloning, Molecular , DNA, Bacterial/genetics , Disease Models, Animal , Genes, Bacterial , Haemophilus ducreyi/genetics , Humans , Male , Molecular Sequence Data , Molecular Weight , Mutation , Protein Binding , Rabbits , Restriction Mapping , Sequence Homology, Amino Acid , Virulence/genetics
17.
Infect Immun ; 63(11): 4244-52, 1995 Nov.
Article in English | MEDLINE | ID: mdl-7591054

ABSTRACT

Previous freeze-fracture electron microscopy (EM) studies have shown that the outer membrane (OM) of Treponema pallidum contains sparse transmembrane proteins. One strategy for molecular characterization of these rare OM proteins involves isolation of T. pallidum OMs. Here we describe a simple and extremely gentle method for OM isolation based upon isopycnic sucrose density gradient ultracentrifugation of treponemes following plasmolysis in 20% sucrose. Evidence that T. pallidum OMs were isolated included (i) the extremely low protein/lipid ratio of the putative OM fraction, (ii) a paucity of antigenic and/or biochemical markers for periplasmic, cytoplasmic membrane, and cytosolic compartments, and (iii) freeze-fracture EM demonstrating that the putative OMs contained intramembranous particles highly similar in size and density to those in native T. pallidum OMs. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis analysis revealed that the OMs contained a relatively small number of treponemal proteins, including several which did not appear to correspond to previously characterized T. pallidum antigens. Interestingly, these candidate rare OM proteins reacted poorly with syphilitic sera as determined by both conventional immunoblotting and enhanced chemiluminescence. Compared with whole cells, T. pallidum OMs were deficient in cardiolipin, the major lipoidal antigen reactive with antibodies in syphilitic sera. Also noteworthy was that other lipoidal constituents of OMs, including the recently discovered glycolipids, did not react with human syphilitic sera. These latter observations suggest that the poor antigenicity of virulent T. pallidum is a function of both the lipid composition and the low protein content of its OM.


Subject(s)
Treponema pallidum/chemistry , Antigens, Bacterial/chemistry , Bacterial Proteins/chemistry , Borrelia burgdorferi Group/chemistry , Cell Fractionation/methods , Cell Membrane/chemistry , Freeze Fracturing , Humans , Membrane Lipids/chemistry , Membrane Proteins/chemistry , Microscopy, Electron , Molecular Weight , Syphilis/microbiology
18.
Mol Microbiol ; 18(3): 507-20, 1995 Nov.
Article in English | MEDLINE | ID: mdl-8748034

ABSTRACT

Protein export signals from the low-passage 297 strain of Borrelia burgdorferi were cloned as fusions with an Escherichia coli alkaline phosphatase (PhoA) reporter lacking a signal sequence. One PhoA+ clone (BbK2.10-PhoA) was derived from a borrelial lipoprotein. Although the polypeptide encoded by the full-length bbk2.10 gene had 76% similarity and 56% identity to outer surface protein F (OspF) from B. burgdorferi strain N40, antibodies directed against recombinant forms of the two proteins revealed that they were not cross-reactive. The nucleotide sequences of bbk2.10 and ospF from the N40 and 297 strains, respectively, were determined to confirm that the N40 and 297 strains each contained both genes. Southern blot analysis revealed that bbk2.10 is a single-copy gene and that the B. burgdorferi strain 297 and N40 genomes appeared to contain one other gene more closely related to ospF than bbk2.10. It was particularly noteworthy that ospF, but not bbk2.10, was expressed in vitro while B. burgdorferi-infected mice generated antibodies reactive with both lipoproteins. To help confirm that the BbK2.10-reactive antibodies produced by the B. burgdorferi-infected mice were specific for that protein, a second gene, bbk2.11, which hybridized with the ospF probe was cloned; the corresponding polypeptide reacted strongly with OspF antisera but failed to react with BbK2.10-specific antisera. Taken together, these data demonstrate that BbK2.10, BbK2.11, and OspF comprise a B. burgdorferi lipoprotein family and that at least one member (BbK2.10) appears to be expressed only during infection.


Subject(s)
Antigens, Bacterial , Bacterial Outer Membrane Proteins/chemistry , Bacterial Outer Membrane Proteins/isolation & purification , Borrelia burgdorferi Group/chemistry , Gene Expression Regulation, Bacterial , Lipoproteins/chemistry , Lipoproteins/isolation & purification , Amino Acid Sequence , Bacterial Outer Membrane Proteins/genetics , Base Sequence , Blotting, Northern , Blotting, Southern , Borrelia burgdorferi Group/genetics , Cloning, Molecular , Electrophoresis, Gel, Pulsed-Field , Gene Library , Immunoblotting , Lipoproteins/genetics , Molecular Sequence Data , Plasmids , Sequence Alignment , Sequence Analysis, RNA
19.
Mol Microbiol ; 15(6): 1151-64, 1995 Mar.
Article in English | MEDLINE | ID: mdl-7623668

ABSTRACT

Controversy exists regarding the constituents and antigenic properties of the Treponema pallidum outer membrane; a major point of contention concerns the cellular location(s) of the spirochaete's lipoprotein immunogens. To address these issues and circumvent problems associated with prior efforts to localize treponemal surface antigens, we developed a novel strategy for investigating T. pallidum molecular architecture. Virulent treponemes were encapsulated in porous agarose beads (gel microdroplets) and then probed in the presence or absence of Triton X-100. Intact, encapsulated treponemes were not labelled by monospecific antisera directed against four major T. pallidum lipoproteins or a candidate T. pallidum outer membrane protein (TpN50) with C-terminal sequence homology to Escherichia coli OmpA or by human or rabbit syphilitic serum. Each of these immunologic reagents, however, labelled encapsulated treponemes co-incubated with detergent. In contrast, antibodies generated against isolated T. pallidum outer membranes labelled intact organisms and the pattern of fluorescence was consistent with the distribution of rare outer membrane proteins visualized by freeze-fracture electron microscopy. In addition to providing strong evidence that the protein portions of treponemal lipoproteins are located within the periplasmic space, these studies have extended our understanding of the topographical relationships among T. pallidum cell envelope constituents. They also demonstrate the feasibility of generating antibodies against rare outer membrane proteins and detecting them on the surfaces of virulent treponemes.


Subject(s)
Antigens, Bacterial/analysis , Bacterial Outer Membrane Proteins/analysis , Lipoproteins/analysis , Treponema pallidum/immunology , Antibodies, Bacterial , Antibodies, Monoclonal , Antigens, Bacterial/genetics , Base Sequence , Benzoxazoles , Cell Membrane/chemistry , Fluorescent Antibody Technique , Fluorescent Dyes , Immune Sera , Lipoproteins/genetics , Microspheres , Molecular Sequence Data , Octoxynol , Quinolinium Compounds , Recombinant Fusion Proteins/biosynthesis , Sepharose , Treponema pallidum/chemistry
20.
Mol Microbiol ; 10(3): 567-74, 1993 Nov.
Article in English | MEDLINE | ID: mdl-7968534

ABSTRACT

The periplasm of Neisseria gonorrhoeae should be similar to other Gram-negative bacteria, but no published reports confirm this assumption. We used a periplasmic isolation procedure developed in Escherichia coli to release the periplasmic contents of N. gonorrhoeae. The resultant periplasmic extract lacked lipopolysaccharide, protein markers of inner or outer membranes, surface-radiolabelled protein components, or ribosomal proteins. The periplasmic extract contained a single haem protein believed to be a c-type cytochrome known to exist in the periplasm of other Gram-negative species, and retained significant alkaline phosphatase activity. The dominant protein species released in the periplasmic extract was the gonococcal homologue of elongation factor Tu, a major component released in similar periplasmic extracts of E. coli. These data showed that the extraction procedure selectively released periplasmic components and that the gonococcal periplasm was comparable to that of E. coli. Further analysis of the gonococcal periplasm may provide important insights into the physiology of this pathogen of humans.


Subject(s)
Neisseria gonorrhoeae/chemistry , Alkaline Phosphatase/isolation & purification , Amino Acid Sequence , Bacterial Proteins/chemistry , Bacterial Proteins/isolation & purification , Cell Fractionation , Electrophoresis, Polyacrylamide Gel , Escherichia coli/chemistry , Escherichia coli/ultrastructure , Hemeproteins/isolation & purification , Molecular Sequence Data , Molecular Weight , Neisseria gonorrhoeae/ultrastructure , Peptide Elongation Factor Tu/chemistry , Peptide Elongation Factor Tu/isolation & purification , Sequence Alignment , Sequence Homology, Amino Acid , Species Specificity
SELECTION OF CITATIONS
SEARCH DETAIL
...