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1.
Front Bioeng Biotechnol ; 12: 1322985, 2024.
Article in English | MEDLINE | ID: mdl-38562667

ABSTRACT

Eucalyptus covers approximately 7.5 million hectares in Brazil and serves as the primary woody species cultivated for commercial purposes. However, native insects and invasive pests pose a significant threat to eucalyptus trees, resulting in substantial economic losses and reduced forest productivity. One of the primary lepidopteran pests affecting eucalyptus is Thyrinteina arnobia (Stoll, 1782) (Lepidoptera: Geometridae), commonly referred to as the brown looper caterpillar. To address this issue, FuturaGene, the biotech division of Suzano S.A., has developed an insect-resistant (IR) eucalyptus variety, which expresses Cry pesticidal proteins (Cry1Ab, Cry1Bb, and Cry2Aa), derived from Bacillus thuringiensis (Bt). Following extensive safety assessments, including field trials across various biomes in Brazil, the Brazilian National Technical Commission of Biosafety (CTNBio) recently approved the commercialization of IR eucalyptus. The biosafety assessments involved the analysis of molecular genomics, digestibility, thermostability, non-target organism exposure, degradability in the field, and effects on soil microbial communities and arthropod communities. In addition, in silico studies were conducted to evaluate allergenicity and toxicity. Results from both laboratory and field studies indicated that Bt eucalyptus is as safe as the conventional eucalyptus clone for humans, animals, and the environment, ensuring the secure use of this insect-resistant trait in wood production.

2.
GM Crops Food ; 14(1): 1-14, 2023 Dec 31.
Article in English | MEDLINE | ID: mdl-37334790

ABSTRACT

Glyphosate herbicide treatment is essential to sustainable Eucalyptus plantation management in Brazil. Eucalyptus is highly sensitive to glyphosate, and Suzano/FuturaGene has genetically modified eucalyptus to tolerate glyphosate, with the aim of both protecting eucalyptus trees from glyphosate application damage and improving weed management. This study presents the biosafety results of the glyphosate-tolerant eucalyptus event 751K032, which expresses the selection marker neomycin phosphotransferase II (NPTII) enzyme and CP4-EPSPS, a glyphosate-tolerant variant of plant 5-enolpyruvyl-shikimate-3-phosphate synthase enzyme. The transgenic genetically modified (GM) event 751K032 behaved in the plantations like conventional non-transgenic eucalyptus clone, FGN-K, and had no effects on arthropods and soil microorganisms. The engineered NPTII and CP4 EPSPS proteins were heat-labile, readily digestible, and according to the bioinformatics analyses, unlikely to cause an allergenic or toxic reaction in humans or animals. This assessment of the biosafety of the glyphosate-tolerant eucalyptus event 751K032 concludes that it is safe to be used for wood production.


Subject(s)
Eucalyptus , Herbicides , Animals , Humans , Kanamycin Kinase , Plants, Genetically Modified , Eucalyptus/genetics , Herbicides/toxicity
3.
J Environ Manage ; 342: 118097, 2023 Sep 15.
Article in English | MEDLINE | ID: mdl-37196614

ABSTRACT

The concept of environmental flows (E-Flows) describes the streamflow that is necessary to maintain river ecosystems. Although a large number of methods have been developed, a delay was recorded in implementing E-Flows in non-perennial rivers. The general aim of the paper was to analyse the criticalities and the current state of implementation of the E-Flows in non-perennial rivers of southern Europe. The specific objectives were to analyse (i) the European Union (EU) and national legislation on E-Flows, and (ii) the methodologies currently adopted for setting E-Flows in non-perennial rivers in the EU Member States (MSs) of the Mediterranean Region (Spain, Greece, Italy, Portugal, France, Cyprus, and Malta). From the analysis of national legislations, it is possible to acknowledge a step forward toward regulatory unification at the European level, on the subject of E-Flows and more generally toward the protection of aquatic ecosystems. The definition of E-Flows, for most countries, has abandoned the idea of a regime of constant and minimal flow, but it recognizes the importance of the biological, and chemical-physical aspects connected to it. From the analysis of the E-Flows implementation through the review of the case studies, one can surmise that in non-perennial rivers the E-Flows science is still an emerging discipline. The limited availability of hydrological, hydraulic, and biological data as well as the restricted economic resources allocated for managing non-perennial rivers are the main causes of the delay in the E-Flows implementation in MSs. The results of the present study may contribute in setting an E-Flow regime in non-perennial rivers.


Subject(s)
Ecosystem , Rivers , Water Movements , Europe , Spain , Environmental Monitoring/methods
4.
Antibiotics (Basel) ; 11(6)2022 May 24.
Article in English | MEDLINE | ID: mdl-35740114

ABSTRACT

Community-onset bloodstream infections (CO-BSI) caused by gram-negative bacilli are common and associated with significant mortality; those caused by Pseudomonas aeruginosa are associated with worse prognosis and higher rates of inadequateempirical antibiotic treatment. The aims of this study were to describe the characteristics of patients with CO-BSI caused by P. aeruginosa, to identify predictors, and to develop a predictive score for P. aeruginosa CO-BSI. Materials/methods: PROBAC is a prospective cohort including patients >14 years with BSI from 26 Spanish hospitals between October 2016 and May 2017. Patients with monomicrobial P. aeruginosa CO-BSI and monomicrobial Enterobacterales CO-BSI were included. Variables of interest were collected. Independent predictors of Pseudomonas aeruginosa CO-BSI were identified by logistic regression and a prediction score was developed. Results: A total of 78patients with P. aeruginosa CO-BSI and 2572 with Enterobacterales CO-BSI were included. Patients with P. aeruginosa had a median age of 70 years (IQR 60−79), 68.8% were male, median Charlson score was 5 (IQR 3−7), and 30-daymortality was 18.5%. Multivariate analysis identified the following predictors of CO-BSI-PA [adjusted OR (95% CI)]: male gender [1.89 (1.14−3.12)], haematological malignancy [2.45 (1.20−4.99)], obstructive uropathy [2.86 (1.13−3.02)], source of infection other than urinary tract, biliary tract or intra-abdominal [6.69 (4.10−10.92)] and healthcare-associated BSI [1.85 (1.13−3.02)]. Anindex predictive of CO-BSI-PA was developed; scores ≥ 3.5 showed a negative predictive value of 89% and an area under the receiver operator curve (ROC) of 0.66. Conclusions: We did not find a good predictive score of P. aeruginosa CO-BSI due to its relatively low incidence in the overall population. Our model includes variables that are easy to collect in real clinical practice and could be useful to detect patients with very low risk of P. aeruginosa CO-BSI.

5.
Microbiol Spectr ; 10(4): e0005122, 2022 08 31.
Article in English | MEDLINE | ID: mdl-35771010

ABSTRACT

Biliary-tract bloodstream infections (BT-BSI) caused by Enterococcus faecalis and E. faecium are associated with inappropriate empirical treatment and worse outcomes compared to other etiologies. The objective of this study was to investigate the risk factors for enterococcal BT-BSI. Patients with BT-BSI from the PROBAC cohort, including consecutive patients with BSI in 26 Spanish hospitals between October 2016 and March 2017, were selected; episodes caused by E. faecalis or E. faecium and other causes were compared. Independent predictors for enterococci were identified by logistic regression, and a predictive score was developed. Eight hundred fifty episodes of BT-BSI were included; 73 (8.5%) were due to target Enterococcus spp. (48 [66%] were E. faecium and 25 [34%] E. faecalis). By multivariate analysis, the variables independently associated with Enterococcus spp. were (OR; 95% confidence interval): cholangiocarcinoma (4.48;1.32 to 15.25), hospital acquisition (3.58;2.11 to 6.07), use of carbapenems in the previous month (3.35;1.45 to 7.78), biliary prosthesis (2.19;1.24 to 3.90), and moderate or severe chronic kidney disease (1.55;1.07 to 2.26). The AUC of the model was 0.74 [95% CI0.67 to 0.80]. A score was developed, with 7, 6, 5, 4, and 2 points for these variables, respectively, with a negative predictive value of 95% for a score ≤ 6. A model, including cholangiocarcinoma, biliary prosthesis, hospital acquisition, previous carbapenems, and chronic kidney disease showed moderate prediction ability for enterococcal BT-BSI. Although the score will need to be validated, this information may be useful for deciding empirical therapy in biliary tract infections when bacteremia is suspected. IMPORTANCE Biliary tract infections are frequent, and a significant cause of morbidity and mortality. Bacteremia is common in these infections, particularly in the elderly and patients with cancer. Inappropriate empirical treatment has been associated with increased risk of mortality in bacteremic cholangitis, and the probability of receiving inactive empirical treatment is higher in episodes caused by enterococci. This is because many of the antimicrobial agents recommended in guidelines for biliary tract infections lack activity against these organisms. To the best of our knowledge, this is the first study analyzing the predictive factors for enterococcal BT-BSI and deriving a predictive score.


Subject(s)
Bacteremia , Biliary Tract , Cholangiocarcinoma , Cholangitis , Enterococcus faecium , Gram-Positive Bacterial Infections , Renal Insufficiency, Chronic , Aged , Anti-Bacterial Agents/therapeutic use , Bacteremia/drug therapy , Bacteremia/epidemiology , Carbapenems , Cholangiocarcinoma/complications , Cholangitis/complications , Cohort Studies , Enterococcus , Enterococcus faecalis , Gram-Positive Bacterial Infections/drug therapy , Gram-Positive Bacterial Infections/epidemiology , Humans , Renal Insufficiency, Chronic/complications , Risk Factors
6.
Open Forum Infect Dis ; 8(6): ofab163, 2021 Jun.
Article in English | MEDLINE | ID: mdl-34189163

ABSTRACT

BACKGROUND: Although Streptococcus anginosus group (SAG) endocarditis is considered a severe disease associated with abscess formation and embolic events, there is limited evidence to support this assumption. METHODS: We performed a retrospective analysis of prospectively collected data from consecutive patients with definite SAG endocarditis in 28 centers in Spain and Italy. A comparison between cases due to SAG endocarditis and viridans group streptococci (VGS) or Streptococcus gallolyticus group (SGG) was performed in a 1:2 matched analysis. RESULTS: Of 5336 consecutive cases of definite endocarditis, 72 (1.4%) were due to SAG and matched with 144 cases due to VGS/SGG. SAG endocarditis was community acquired in 64 (88.9%) cases and affected aortic native valve in 29 (40.3%). When comparing SAG and VGS/SGG endocarditis, no significant differences were found in septic shock (8.3% vs 3.5%, P = .116); valve disorder, including perforation (22.2% vs 18.1%, P = .584), pseudoaneurysm (16.7% vs 8.3%, P = .108), or prosthesis dehiscence (1.4% vs 6.3%, P = .170); paravalvular complications, including abscess (25% vs 18.8%, P = .264) and intracardiac fistula (5.6% vs 3.5%, P = .485); heart failure (34.7% vs 38.9%, P = .655); or embolic events (41.7% vs 32.6%, P = .248). Indications for surgery (70.8% vs 70.8%; P = 1) and mortality (13.9% vs 16.7%; P = .741) were similar between groups. CONCLUSIONS: SAG endocarditis is an infrequent but serious condition that presents a prognosis similar to that of VGS/SGG.

7.
Int J Antimicrob Agents ; 58(1): 106352, 2021 Jul.
Article in English | MEDLINE | ID: mdl-33961992

ABSTRACT

The epidemiology of bloodstream infections (BSIs) is dynamic as it depends on microbiological, host and healthcare system factors. The aim of this study was to update the information regarding the epidemiology of BSIs in Spain considering the type of acquisition. An observational, prospective cohort study in 26 Spanish hospitals from October 2016 through March 2017 including all episodes of BSI in adults was performed. Bivariate analyses stratified by type of acquisition were performed. Multivariate analyses were performed by logistic regression. Overall, 6345 BSI episodes were included; 2510 (39.8%) were community-acquired (CA), 1661 (26.3%) were healthcare-associated (HCA) and 2056 (32.6%) hospital-acquired (HA). The 30-day mortality rates were 11.6%, 19.5% and 22.0%, respectively. The median age of patients was 71 years (interquartile range 60-81 years) and 3656 (58.3%; 95% confidence interval 57.1-59.6%) occurred in males. The proportions according to patient sex varied according to age strata. Escherichia coli (43.8%), Klebsiella spp. (8.9%), Staphylococcus aureus (8.9%) and coagulase-negative staphylococci (7.4%) were the most frequent pathogens. Multivariate analyses confirmed important differences between CA and HCA episodes, but also between HCA and HA episodes, in demographics, underlying conditions and aetiology. In conclusion, we have updated the epidemiological information regarding patients' profiles, underlying conditions, frequency of acquisition types and aetiological agents of BSI in Spain. HCA is confirmed as a distinct type of acquisition.


Subject(s)
Bacteremia/epidemiology , Bacteremia/microbiology , Community-Acquired Infections/epidemiology , Community-Acquired Infections/microbiology , Cross Infection/epidemiology , Cross Infection/microbiology , Adolescent , Adult , Aged , Aged, 80 and over , Bacteremia/mortality , Escherichia coli/isolation & purification , Female , Humans , Klebsiella/isolation & purification , Male , Middle Aged , Prospective Studies , Risk Factors , Severity of Illness Index , Spain/epidemiology , Staphylococcus aureus/isolation & purification , Young Adult
8.
J Glob Antimicrob Resist ; 20: 183-186, 2020 03.
Article in English | MEDLINE | ID: mdl-31421285

ABSTRACT

OBJECTIVES: The aim of this study was to determine resistance to antituberculosis (anti-TB) drugs in Mycobacterium tuberculosis complex isolates from patients diagnosed with Tuberculosis (TB) in southeast Spain and to study related epidemiological factors. METHODS: This retrospective study analysed 5-year data (2012-2016) obtained in southeast Spain for a total equivalent population of 1 735 608 inhabitants. Clinical samples were examined from 557 patients with suspected pulmonary TB (n=470; 84.4%) or extrapulmonary TB (n=87; 15.6%), taking into account patient age, sex, human immunodeficiency virus (HIV) infection, country of birth and prior anti-TB treatment. RESULTS: TB was found more frequently in men than in women (66.6% vs. 33.4%), and the age group with the most cases (43.7%) was 36-55 years. Among the first-line anti-TB drugs, 7.0% of patients harboured isolates resistant to isoniazid (INH) and 1.6% to rifampicin (RIF); moreover, 1.4% of isolates were multidrug-resistant TB (MDR-TB) and 0.7% were extensively drug-resistant TB. There was a statistically significant relationship (P=0.028) between MDR-TB isolates and non-Spanish-born patients, but not between the latter and INH resistance. CONCLUSION: Resistance to INH and RIF was observed at levels similar to those published nationwide, with rates of MDR-TB being somewhat lower. Rates of HIV/TB co-infection have decreased considerably between 2012 and 2016.


Subject(s)
Antitubercular Agents/pharmacology , Drug Resistance, Multiple, Bacterial , Isoniazid/pharmacology , Mycobacterium tuberculosis/classification , Rifampin/pharmacology , Tuberculosis/microbiology , Adolescent , Adult , Age Factors , Aged , Aged, 80 and over , Child , Child, Preschool , Female , Humans , Infant , Infant, Newborn , Male , Microbial Sensitivity Tests , Middle Aged , Mycobacterium tuberculosis/drug effects , Mycobacterium tuberculosis/genetics , Mycobacterium tuberculosis/isolation & purification , Retrospective Studies , Sex Characteristics , Spain , Young Adult
9.
Trop Anim Health Prod ; 51(8): 2505-2511, 2019 Nov.
Article in English | MEDLINE | ID: mdl-31201602

ABSTRACT

The objective of this study was to evaluate the inclusion of increasing levels of licuri meal as a substitute for soybean bran in the diet of pasture-based dairy cows and its effects on the intake, nutrient digestibility, and milk production and composition. Eight crossbred Holstein/Zebu cows were used in two 4 × 4 Latin square plots. The diets contained increasing percentage of licuri meal (0.0, 4.16, 7.09, and 9.45%) in the total diet, replacing soybean bran. The inclusion of licuri meal in the diet affected total dry matter intake and dry matter intake in relation to body weight, which presented a quadratic effect. The same behavior was observed for the consumption of EE, CP, TDN, and NDFap. The NFC consumption showed a linear decrease with the addition of the by-product in the diet. There was no influence of the inclusion of the licuri meal on the digestibility of the DM, CP, NFC, and TDN, while the digestibility of the NDFap and EE presented increasing linear effect. There was a reduction of milk production and food efficiency with the inclusion of increasing levels of the meal. The fat content in milk showed a linear increasing effect. Ditto for cholesterol. It is recommended to include not more than 7.00% of licuri meal for lactating cows with an average production of 20 kg day-1.


Subject(s)
Animal Feed/analysis , Arecaceae/chemistry , Cattle , Diet/veterinary , Lactation/physiology , Animal Nutritional Physiological Phenomena , Animals , Body Weight , Digestion , Female , Milk , Rumen , Glycine max
10.
Anaerobe ; 57: 93-98, 2019 Jun.
Article in English | MEDLINE | ID: mdl-30959165

ABSTRACT

Clostridium difficile infection (CDI) is characterized by a high delayed and unrelated mortality. Predicting delayed mortality in CDI patients could allow the implementation of interventions that could reduce these events. A prospective multicentric study was carried out to investigate prognostic factors associated with mortality. It was based on a cohort (July 2015 to February 2016) of 295 patients presenting with CDI. Logistic regression was used and the model was calibrated using the Hosmer-Lemeshow test. The mortality rate at 75 days in our series was 18%. Age (>65 years), comorbidity (defined by heart failure, diabetes mellitus with any organ lesion, renal failure, active neoplasia or immunosuppression) and fecal incontinence at clinical presentation were associated with delayed (75-day) mortality. When present, each of the aforementioned variables added one point to the score. Mortalities with 0, 1, 2 and 3 points were 0%, 9.4%, 18.5% and 38.2%, respectively. The area under the ROC curve was 0.743, and the Hosmer-Lemeshow goodness-of-fit test p value was 0.875. Therefore, the prediction of high delayed mortality in CDI patients by our scoring system could promote measures for increasing survival in suitable cases.


Subject(s)
Clostridium Infections/mortality , Aged , Clostridium Infections/complications , Comorbidity , Female , Humans , Male , Prospective Studies , Survival Analysis , Time Factors
11.
Int J Antimicrob Agents ; 51(3): 393-398, 2018 Mar.
Article in English | MEDLINE | ID: mdl-28939450

ABSTRACT

Recurrence of Clostridium difficile infection (CDI) has major consequences for both patients and the health system. The ability to predict which patients are at increased risk of recurrent CDI makes it possible to select candidates for treatment with new drugs and therapies (including fecal microbiota transplantation) that have proven to reduce the incidence of recurrence of CDI. Our objective was to develop a clinical prediction tool, the GEIH-CDI score, to determine the risk of recurrence of CDI. Predictors of recurrence of CDI were investigated using logistic regression in a prospective cohort of 274 patients diagnosed with CDI. The model was calibrated using the Hosmer-Lemeshow test. The tool comprises four factors: age (70-79 years and ≥80 years), history of CDI during the previous year, direct detection of toxin in stool, and persistence of diarrhea on the fifth day of treatment. The functioning of the GEIH-CDI score was validated in a prospective cohort of 183 patients. The area under the ROC curve was 0.72 (0.65-0.79). Application of the tool makes it possible to select patients at high risk (>50%) of recurrence and patients at low risk (<10%) of recurrence. GEIH-CDI score may be useful for clinicians treating patients with CDI.


Subject(s)
Clostridium Infections/diagnosis , Decision Support Techniques , Recurrence , Aged , Aged, 80 and over , Female , Humans , Male , Middle Aged , Prospective Studies
12.
Infez Med ; 25(4): 371-373, 2017 Dec 01.
Article in English | MEDLINE | ID: mdl-29286019

ABSTRACT

Rothia mucilaginosa, previously known as Stomatococcus mucilaginosus, is a Gram-positive coccus that is part of the oropharyngeal microbiota and upper respiratory tract. It is mainly related to infections in immunosuppressed patients. Given its complex microbiological identification, its prevalence may be underestimated. We describe in this article a case of bacteraemia by Rothia in an immunocompetent paediatric patient without epidemiological or medical relevant history. In the available literature no cases of bacteraemia by Rothia mucilaginosa in immunocompetent paediatric patients have been reported. Given the characteristics of our patient, the publication of this case is of interest. Once the diagnosis of Rothia mucilaginosa has been made, the correct functioning of the immune system of the patient should be checked.


Subject(s)
Actinomycetales Infections/microbiology , Bacteremia/microbiology , Micrococcaceae/isolation & purification , Acetates/therapeutic use , Anti-Asthmatic Agents/therapeutic use , Asthma/complications , Communicable Diseases, Emerging , Cyclopropanes , Herpangina/complications , Humans , Immunocompetence , Infant , Male , Micrococcaceae/pathogenicity , Otitis Media/complications , Quinolines/therapeutic use , Sulfides
14.
Enferm. infecc. microbiol. clín. (Ed. impr.) ; 33(10): 646-650, dic. 2015. ilus, tab, graf
Article in Spanish | IBECS | ID: ibc-145628

ABSTRACT

INTRODUCCIÓN: En enero de 2014 se conoció la existencia de un posible brote de bacteriemia por Burkholderia cepacia en un centro concertado de hemodiálisis en La Línea de la Concepción (Cádiz). Se inició una investigación para determinar la causa del brote y establecer medidas de control. MÉTODOS: Se realizó un análisis descriptivo de los pacientes afectados por bacteriemia por Burkholderia cepacia desde noviembre de 2013 hasta febrero de 2014 y de las posibles características comunes entre cada uno de ellos. Se tomaron muestras de diferentes zonas y superficies buscando el origen el brote. Se realizó estudio de tipificación molecular mediante electroforesis en gel de campo pulsado (Spel PFGE) y análisis mediante MLST en centro de referencia para determinar la similitud genética de las cepas aisladas. RESULTADOS: En el periodo de estudio se aisló la bacteria en los hemocultivos de 7 pacientes, en 3 muestras de sellado (líquido endoluminal) de catéteres (2 de ellos fueron también casos) y en 4 muestras de botes de clorhexidina. Los pacientes eran coincidentes en 2 de los 6 turnos de diálisis. La edad media de los casos fue de 67 años. El 57% fueron mujeres. Se analizó la relación clonal entre casos y una muestra ambiental y resultaron ser idénticos genéticamente (clon ST653). CONCLUSIONES: Se confirmó la presencia de un brote de Burkholderia cepacia con 7 casos entre pacientes que estaban siendo hemodializados. El brote fue debido a una misma cepa con una fuente probablemente común y una transmisión secundaria de persona a persona


INTRODUCTION: In January 2014 a possible outbreak of Burkholderia cepacia bacteremia occurred in a hemodialysis center situated in La Linea de la Concepción (Cadiz). An investigation was begun to confirm the outbreak, identify the source, and implement control measures. METHODS: A descriptive analysis was performed to describe the characteristics of the patients affected with Burkholderia cepacia bacteremia from November 2013 to February 2014. Environmental samples were taken. A molecular typing study was performed using pulsed field gel electrophoresis (SpeI PFGE) and MLST analysis in order to determine the genetic similarity between the isolates. RESULTS: The bacterium was isolated from blood cultures of 7 patients during the study period. Three of the samples (2 of which were also cases) were endoluminal fluid from catheter locks, and 4 chlorhexidine bottle samples. The patients were coincident in 2 of the 6 work shifts. The mean age of the cases was 67 years of whom 57% were women. Human samples and an environmental sample was analyzed and found to be genetically identical (ST653 clone). CONCLUSIONS: The analysis confirmed the outbreak of Burkholderia cepacia, with 7 cases among the patients of the hemodialysis center. The outbreak was due to the same strain, probably a common source and secondary transmission from person to person


Subject(s)
Humans , Bacteremia/epidemiology , Burkholderia cepacia/isolation & purification , Burkholderia Infections/microbiology , Disease Outbreaks/statistics & numerical data , Cross Infection/microbiology
16.
Environ Manage ; 56(2): 271-85, 2015 Aug.
Article in English | MEDLINE | ID: mdl-26076892

ABSTRACT

There is general agreement among scientists that global temperatures are rising and will continue to increase in the future. It is also agreed that human activities are the most important causes of these climatic variations, and that water resources are already suffering and will continue to be greatly impaired as a consequence of these changes. In particular, it is probable that areas with limited water resources will expand and that an increase of global water demand will occur, estimated to be around 35-60% by 2025 as a consequence of population growth and the competing needs of water uses. This will cause a growing imbalance between water demand (including the needs of nature) and supply. This urgency demands that climate change impacts on water be evaluated in different sectors using a cross-cutting approach (Contestabile in Nat Clim Chang 3:11-12, 2013). These issues were examined by the EU FP7-funded Co-ordination and support action "ClimateWater" (bridging the gap between adaptation strategies of climate change impacts and European water policies). The project studied adaptation strategies to minimize the water-related consequences of climate change and assessed how these strategies should be taken into consideration by European policies. This article emphasizes that knowledge gaps still exist about the direct effects of climate change on water bodies and their indirect impacts on production areas that employ large amounts of water (e.g., agriculture). Some sectors, such as ecohydrology and alternative sewage treatment technologies, could represent a powerful tool to mitigate climate change impacts. Research needs in these still novel fields are summarized.


Subject(s)
Climate Change , Conservation of Natural Resources , Water Resources/supply & distribution , Water Supply/standards , Agriculture , Conservation of Natural Resources/methods , Conservation of Natural Resources/trends , Environmental Policy , Europe , Humans , Population Growth , Water Purification
17.
Enferm Infecc Microbiol Clin ; 33(10): 646-50, 2015 Dec.
Article in Spanish | MEDLINE | ID: mdl-25824991

ABSTRACT

INTRODUCTION: In January 2014 a possible outbreak of Burkholderia cepacia bacteremia occurred in a hemodialysis center situated in La Linea de la Concepción (Cadiz). An investigation was begun to confirm the outbreak, identify the source, and implement control measures. METHODS: A descriptive analysis was performed to describe the characteristics of the patients affected with Burkholderia cepacia bacteremia from November 2013 to February 2014. Environmental samples were taken. A molecular typing study was performed using pulsed field gel electrophoresis (SpeI PFGE) and MLST analysis in order to determine the genetic similarity between the isolates. RESULTS: The bacterium was isolated from blood cultures of 7 patients during the study period. Three of the samples (2 of which were also cases) were endoluminal fluid from catheter locks, and 4 chlorhexidine bottle samples. The patients were coincident in 2 of the 6 work shifts. The mean age of the cases was 67 years of whom 57% were women. Human samples and an environmental sample was analyzed and found to be genetically identical (ST653 clone). CONCLUSIONS: The analysis confirmed the outbreak of Burkholderia cepacia, with 7 cases among the patients of the hemodialysis center. The outbreak was due to the same strain, probably a common source and secondary transmission from person to person.


Subject(s)
Bacteremia/epidemiology , Burkholderia Infections/epidemiology , Burkholderia cepacia/isolation & purification , Cross Infection/epidemiology , Disease Outbreaks , Hospital Units , Renal Dialysis , Aged , Bacteremia/microbiology , Bacterial Typing Techniques , Burkholderia Infections/microbiology , Burkholderia Infections/prevention & control , Burkholderia Infections/transmission , Burkholderia cepacia/classification , Burkholderia cepacia/genetics , Cross Infection/microbiology , Cross Infection/prevention & control , Cross Infection/transmission , DNA, Bacterial/analysis , Electrophoresis, Gel, Pulsed-Field , Female , Hospitals, Urban , Humans , Male , Middle Aged , Multilocus Sequence Typing , Risk Factors , Spain/epidemiology
18.
Infez Med ; 22(2): 149-51, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24955804

ABSTRACT

Leclercia adecarboxylata is being increasingly diagnosed as a causative agent of infection due to the availability of rapid molecular diagnostic techniques Few cases of bacteraemia in subjects with underlying medical conditions have been reported. We report a case of L. adecarboxylata bacteraemia in an immunocompromised patient with metabolic syndrome.


Subject(s)
Bacteremia/diagnosis , Bacteremia/microbiology , Enterobacteriaceae Infections/diagnosis , Enterobacteriaceae/isolation & purification , Immunocompromised Host , Metabolic Syndrome/complications , Amoxicillin-Potassium Clavulanate Combination/therapeutic use , Bacteremia/therapy , Body Mass Index , Debridement/methods , Diabetes Mellitus, Type 2/complications , Enterobacteriaceae Infections/complications , Enterobacteriaceae Infections/therapy , Female , Humans , Hypertension/complications , Leg/pathology , Middle Aged , Risk Factors , Treatment Outcome
19.
BMC Infect Dis ; 13: 344, 2013 Jul 24.
Article in English | MEDLINE | ID: mdl-23883281

ABSTRACT

BACKGROUND: Healthcare-associated (HCA) bloodstream infections (BSI) have been associated with worse outcomes, in terms of higher frequencies of antibiotic-resistant microorganisms and inappropriate therapy than strict community-acquired (CA) BSI. Recent changes in the epidemiology of community (CO)-BSI and treatment protocols may have modified this association. The objective of this study was to analyse the etiology, therapy and outcomes for CA and HCA BSI in our area. METHODS: A prospective multicentre cohort including all CO-BSI episodes in adult patients was performed over a 3-month period in 2006-2007. Outcome variables were mortality and inappropriate empirical therapy. Adjusted analyses were performed by logistic regression. RESULTS: 341 episodes of CO-BSI were included in the study. Acquisition was HCA in 56% (192 episodes) of them. Inappropriate empirical therapy was administered in 16.7% (57 episodes). All-cause mortality was 16.4% (56 patients) at day 14 and 20% (71 patients) at day 30. After controlling for age, Charlson index, source, etiology, presentation with severe sepsis or shock and inappropriate empirical treatment, acquisition type was not associated with an increase in 14-day or 30-day mortality. Only an stratified analysis of 14th-day mortality for Gram negatives BSI showed a statically significant difference (7% in CA vs 17% in HCA, p = 0,05). Factors independently related to inadequate empirical treatment in the community were: catheter source, cancer, and previous antimicrobial use; no association with HCA acquisition was found. CONCLUSION: HCA acquisition in our cohort was not a predictor for either inappropriate empirical treatment or increased mortality. These results might reflect recent changes in therapeutic protocols and epidemiological changes in community pathogens. Further studies should focus on recognising CA BSI due to resistant organisms facilitating an early and adequate treatment in patients with CA resistant BSI.


Subject(s)
Anti-Bacterial Agents/therapeutic use , Bacteremia/drug therapy , Community-Acquired Infections/drug therapy , Cross Infection/drug therapy , Adult , Analysis of Variance , Drug Resistance, Bacterial , Female , Humans , Logistic Models , Male , Prospective Studies , ROC Curve , Risk Factors , Treatment Outcome
20.
Infez Med ; 20(3): 169-75, 2012 Sep.
Article in English | MEDLINE | ID: mdl-22992556

ABSTRACT

Respiratory Syncytial Virus (RSV) is the main cause of acute lower respiratory tract infections in children under 2 years, its distribution is worldwide and even in very different climatic conditions, it appears to have similar features, certainly knowing it will produce a significant amount of infections each year. We present the results of a retrospective review of positive cases for RSV detected in the Microbiology Laboratory of the Hospital Clinico Universitario of Valladolid in the period between 1990 and 2000, dealing with its presentation at the given time with the weather variables of temperature and humidity. Every year, we have observed as the clustering of cases was associated with two outbreaks, one at the beginning and the other at the end of the year, coinciding with the coldest and wettest months. This pattern has been repeated every revised year, according to an annual rate, with the onset of the first insulation between the months of October and February, and of the last ending between March and June, showing the highest peaks of isolation during the month of February. Therefore, every year we observe a break or seasonal slip matching the months with higher temperatures and lower humidity.


Subject(s)
Bronchiolitis/diagnosis , Bronchiolitis/epidemiology , Respiratory Syncytial Virus Infections/diagnosis , Respiratory Syncytial Virus Infections/epidemiology , Respiratory Syncytial Virus, Human , Bronchiolitis/prevention & control , Bronchiolitis/virology , Cluster Analysis , Disease Outbreaks/prevention & control , Global Health , Humans , Humidity , Incidence , Respiratory Syncytial Virus Infections/prevention & control , Respiratory Syncytial Virus Infections/virology , Respiratory Syncytial Virus, Human/isolation & purification , Retrospective Studies , Risk Factors , Seasons , Spain/epidemiology , Temperature
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