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1.
Arch Razi Inst ; 78(4): 1247-1255, 2023 08.
Article in English | MEDLINE | ID: mdl-38226370

ABSTRACT

Mycoplasma gallisepticum (MG) is a contagious avian pathogen that causes financial losses to the poultry industry. Isolation of the pathogen is difficult and time-consuming, and therefore, far from a routine method. Serological testing methods to detect antibodies resistant to MG are widely used in routine diagnosis. Tylosin is a class of macrolide antibiotics tremendously administered in veterinary medicine for the treatment of mycoplasmosis and prophylaxis. This study aimed to detect MG by immunoassay testing, culture, and polymerase chain reaction (PCR) in commercial poultry farms and to investigate the tylosin susceptibility of the isolates. To verify the presence of antibodies resistant to MG, 750 blood samples were randomly collected from 38 broiler farms from 2019 to 2022 in Mazandaran and Golestan provinces, Iran, and rapid slide agglutination (RSA) assay was performed. Positive results were analyzed by the enzyme-linked immunosorbent assay (ELISA) for further investigation. Here, 920 swab samples were collected from 38 non-vaccinated commercial farms for culture, and PCR tests were performed for the isolated strains. The activities of tylosin were tested in vitro against these isolates using the broth microdilution method. The lowest antibiotic concentration that resulted in a color change was considered the minimum inhibitory concentration (MIC) value. Twenty-four (63.1%) farms were positive in the RSA test, and 21 (55.2%) farms were positive in the ELISA test. Nine (23.68%) of the farms grew on culture media, and 8 (21.05%) were detected as Gallisepticum species by PCR. The geometric mean of MIC for tylosin was 5.75 µg/ml, MIC50 was 4 µg/ml, and MIC90 was 8 µg/ml. The results indicated that commercial farms were infected with MG. Considering the ability of MG to spread and the probable use of the RSA test as a rapid and cheap method, it can be argued that ELISA and RSA serological tests can be used to find MG in poultry flocks, and the positive result should be confirmed by standard microbiological tests or PCR. It was also found that the isolated parts of MG changed their sensitivity to tylosin, indicating the need for routine testing to optimize treatment dose and efficiency.


Subject(s)
Mycoplasma Infections , Mycoplasma gallisepticum , Animals , Tylosin/pharmacology , Tylosin/therapeutic use , Chickens , Anti-Bacterial Agents/pharmacology , Mycoplasma Infections/veterinary , Mycoplasma Infections/microbiology , Poultry
2.
Arch Razi Inst ; 78(4): 1305-1312, 2023 08.
Article in English | MEDLINE | ID: mdl-38226390

ABSTRACT

Burkholderia mallei is the main cause of glanders as a dangerous contagious zoonosis disease that is mostly observed in single-hoofed animals, especially horses. Modern molecular techniques have been recently employed to improve epidemiology for identifying and searching for strains of this bacterium at different times and locations. Due to the unknown number of circulating strains and lack of preventive methods, glanders is still observed in the form of epidemics. The present study aimed to evaluate six field isolates plus two laboratory strains of Borkolderia mallei and Burkholderia pseudomallei using the polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) method. All the isolates and strains were microbially cultured in the glycerol nutrient and glycerol agar media. The individually grown colonies of the bacterium were used in the biochemical tests. The DNA of isolates was extracted by boiling, and the PCR-RFLP test was conducted on their genome. Finally, the bacterium was injected into guinea pigs to induce the Straus reaction. The biochemical assays (or bioassays) confirmed the isolates as Burkholderia mallei. The PCR-RFLP assay demonstrated a product for Burkholderia mallei with a length of 650 bp. Nevertheless, 250 and 400 bp were produced for Burkholderia pseudomallei. The swollen scrotum pointed to the occurrence of the Straus reaction. The PCR-RFLP is a proper differential diagnosis technique for B. mallei; moreover, it is a suitable method for differentiating between Burkholderia mallei and Burkholderia pseudomallei. This technique can detect Burkholderia mallei in a short time with high precision and sensitivity.


Subject(s)
Burkholderia mallei , Burkholderia pseudomallei , Glanders , Horse Diseases , Horses/genetics , Animals , Guinea Pigs , Burkholderia mallei/genetics , Glanders/diagnosis , Glanders/microbiology , Polymorphism, Restriction Fragment Length , Glycerol , Burkholderia pseudomallei/genetics , Polymerase Chain Reaction/veterinary , Polymerase Chain Reaction/methods
3.
Arch Razi Inst ; 77(2): 861-867, 2022 04.
Article in English | MEDLINE | ID: mdl-36284964

ABSTRACT

Avian Influenza Viruses (AIV) are the causative agents of Avian Influenza (AI), which is a contagious and zoonotic disease in birds. Among birds, wild waterfowls and ducks are the primary and natural reservoirs of low pathogenic avian influenza viruses (LPAI). This study aimed to identify and differentiate between two AIV subtypes (i.e., hemagglutinin and neuraminidase from domestic ducks by hemagglutinin inhibition (HI) and neuraminidase inhibition (NI) assays. To this end, 962 cloacal swabs were collected from domestic ducks being sold at different Iranian Live Bird Markets in Gilan, Mazandaran, and Golestan provinces, located at the southern coast of the Caspian Sea. The samples were inoculated in 10-day-old embryonated specific pathogen-free chicken eggs, and subsequently, harvested allantoic fluids were subjected to agar gel immunodiffusion, HI, and NI assays. In total, five positive samples, including two H4N2 and three H3N2 AIV subtypes were identified. Isolation of H4N2 and H3N2 viruses has never been reported from Iranian domestic ducks previously. This finding further suggests the diversity of LPAI viruses in Iranian ducks and also shows that the HI and NI assays are highly efficient in determining AIV subtypes.


Subject(s)
Influenza A virus , Influenza in Birds , Animals , Ducks , Influenza in Birds/epidemiology , Iran/epidemiology , Neuraminidase/genetics , Influenza A Virus, H3N2 Subtype , Hemagglutinins , Agar , Phylogeny , Chickens
4.
Arch Razi Inst ; 77(5): 1769-1777, 2022 10.
Article in English | MEDLINE | ID: mdl-37123142

ABSTRACT

Clostridium novyi (C. novyi) causes deadly Black disease in sheep and rarely in other animals. Alpha toxin (α-toxin), the most apparent pathogen of this disease, is produced by C. novyi type B. Economic damages of C. novyi include sheep mortality costs, depreciation of affected farms, and health problems with infected carcasses. The identification of C. novyi and isolation of its pathogens by conventional methods is a time-consuming process, necessitating a simple and rapid method for isolating and detecting pathogenic C. novyi. Therefore, this study aimed to molecularly identify α-toxin in local C. novyi isolates from the sheep livers. In this study, 75 livers suspected of Black disease were sampled. The samples of the liver were cultured under anaerobic conditions. Some of the cultured colonies were used in biochemical tests. For molecular confirmation, the DNA of isolates was extracted, and the isolates were confirmed by the polymerase chain reaction (PCR) on the liver tissue and cultured samples using specific α-toxin primers. The PCR on α-toxin produced a band in the range of 609 bp, indicating that the samples belonged to C. novyi. According to the results, of 75 isolates, 18 isolates were confirmed as C. novyi. C. novyi type B was isolated from the liver and confirmed by biochemical and molecular characterization. The PCR assay ensured a sensitive and specific tool for the detection of C. novyi in the samples.


Subject(s)
Clostridium , Liver , Sheep , Animals , Polymerase Chain Reaction/veterinary
5.
Arch Razi Inst ; 76(1): 61-68, 2021 03.
Article in English | MEDLINE | ID: mdl-33818958

ABSTRACT

Mycoplasma agalactiae (M. agalactiae) is known as the main etiological agent of contagious agalactia (CA). The CA is a disease affecting dairy sheep and goats, the main characteristics of which include keratoconjunctivitis, arthritis, and mastitis. This pathogen results in milk production reduction and suppression, thereby leading to serious economic loss. In the present study, 125 sheep and goat samples were collected from 15 provinces of Iran. Cultural and molecular methods were used for sample characterization. After extracting genomic DNAs using the phenol/chloroform method, the PCR technique was employed to detect Mycoplasma genus in 163bp fragment of 16S rRNA gene (M-PCR) and M. agalactiae in 800bp fragment of conserve and specific P30 lipoprotein gene (P30-PCR) in cultural and clinical samples. Finally, to validate the experimental approach, a 375 bp amplicon of P80 lipoprotein was amplified using the MA-PCR. Out of 125 samples under investigation, 43 cases were positive, and Mycoplasma colonies were observed in the pleuropneumonia-like organisms agar culture. Based on the results of the M-PCR method, 61 specimens (out of 125 samples) were scored positive for Mycoplasma presence. Furthermore, 20 samples were positive according to the P30-PCR data. It should be mentioned that the MA-PCR was performed based on the P80 gene on 125 total samples to furtherverify the results for M.agalactiae detection. Based on the obtained data, P30 and P80 genes were presented and amplified in all Iranian M. agalactiae isolates (n=20). Our results indicated that the P30 gene was conserved and specific to all Iranian M. agalactiae isolates and this new P30-PCR method (as an MA-PCR technique) might be useful in the detection of this pathogen.


Subject(s)
Goat Diseases , Mycoplasma Infections , Mycoplasma agalactiae , Mycoplasma , Animals , Iran/epidemiology , Mycoplasma Infections/epidemiology , Mycoplasma Infections/veterinary , Mycoplasma agalactiae/genetics , RNA, Ribosomal, 16S/genetics , Sheep
6.
Iran J Vet Res ; 20(1): 1-8, 2019.
Article in English | MEDLINE | ID: mdl-31191692

ABSTRACT

BACKGROUND: Virulent Newcastle disease virus (vNDV) causes great economic losses to the poultry industry throughout the world. Despite the endemicity of Newcastle disease (ND) and occurrence of recurrent outbreaks, the nature and genetic features of circulating NDV strains in Iran are largely unknown. Aims: This study was conducted to characterize 13 NDV isolates obtained from different outbreaks in various regions of Iran during 1999-2000 by sequencing and phylogenetic analysis of complete coding sequences of haemagglutinin-neuraminidase (HN) gene. METHODS: All isolates were analyzed based on the previously determined in vivo pathogenicity indices and amino acid (aa) sequences of fusion (F) protein cleavage site (FPCS). RESULTS: Phylogenetic analysis based on the HN gene coding region revealed a very close relationship of these viruses with the recently defined genotype XIII, and more specifically, subgenotype XIIIa viruses. Analysis of HN gene nucleotide (nt) sequences revealed that all studied isolates encode for a protein length of 571 aa and there is no C-terminal extension on HN aa sequences. Sequence analysis revealed multiple aa residue substitutions at antigenic sites or neutralizing epitopes on the HN glycoprotein of studied viruses compared with commonly used vaccinal strains. CONCLUSION: In this study, molecular characterization of vNDV isolates, obtained from commercial poultry farms in Iran, were conducted through complete sequencing and analysis of HN gene. Isolation and molecular characterization of further NDV isolates from other parts of Iran and from neighboring countries in the region will be helpful to identify the nature and origin of indigenous viruses.

7.
Arch Razi Inst ; 74(4): 365-373, 2019 12.
Article in English | MEDLINE | ID: mdl-31939253

ABSTRACT

Rural poultry farming is common in the Northern provinces. Similar to commercial poultry, rural poultry is susceptible to most infectious diseases. In addition, by increasing the density of poultry farming, the probability of disease incidences has been increased. Newcastle disease is the most highly infectious disease which is endemic in Iran and causes outbreaks among commercial and rural poultry every year. The present study aimed to investigate the prevalence and virus circulation of Newcastle disease among rural poultry in Northern provinces of Iran. In the current study, 70 villages in 3 provinces (20, 30, and 20 villages in Mazandaran, Golestan, and Gilan, respectively) and a total of 1,374 birds (600, 400, and 374 birds in Mazandaran, Golestan, and Gilan, respectively) were sampled. Each village was regarded as an epidemiological unit. In the present study, birds of 67 (96%) villages were positive (presence of antibodies against Newcastle disease virus), including 28 (93.3%), 19 (95%), and 20 (100%) villages in Golestan, Mazandaran, and Gilan, respectively. Moreover, out of 1,374 birds, 616 (45%) of them were seropositive against Newcastle disease virus with 242 (41%), 159 (39.8%), and 211 (56%) samples in Mazandaran, Golestan, and Gilan, respectively. According to the results of the current study, the seroprevalence rate was reported to be high in both villages and birds. Such a high seroprevalence rate was indicative of the continuous exposure of the rural poultry to Newcastle virus and high virus circulation rate in the mentioned provinces which could result in the dissemination of the disease to commercial farms. Consequently, the implementation of proper control and care programs (e.g., vaccination of native poultry) can facilitate the reduction of Newcastle disease prevalence.


Subject(s)
Chickens , Newcastle Disease/epidemiology , Poultry Diseases/epidemiology , Animals , Female , Iran/epidemiology , Newcastle Disease/virology , Newcastle disease virus/physiology , Poultry Diseases/virology , Prevalence , Seroepidemiologic Studies
8.
Arch Razi Inst ; 73(4): 265-275, 2018 12.
Article in English | MEDLINE | ID: mdl-31077116

ABSTRACT

P48 protein of Mycoplasma agalactiae is used to diagnose infection and was identified as potential vaccine candidate. According to the genetic nature of mycoplasma and variable sensitivity in P48-based serological diagnosis tests, intra species variation of P48 nucleotide sequence investigated in 13 field isolates of difference province of Iran along with three vaccine strains. Samples were collected from sheep and goat and were cultured in modified PPLO broth. Two pair of primer employed to confirm genus and species of isolates and a pair of primer has developed to amplify the P48 gene. The sequencing results of PCR products were aligned and analyzed besides published sequences in GenBank. T-Cell and B-Cell epitopes and antigenicity of sequence were computationally predicted. The results have shown P48 nucleotide sequences are 99.9% identical in field isolates and vaccine strain of Iran, but analysis of GenBank published sequences have shown divergence up to 5.3% at the nucleotide level and up to 4.9% divergence in protein level of P48 sequences of Iran isolates and other available sequences in GenBank. Single nucleotide polymorphism exists in 89 positions and variable amino acid was observed at 25 residues. Phylogenetic analyses have shown that Mycoplasma agalactiae isolates fall into three main groups based on P48 nucleotide sequences. Immunoinformatics analysis of all available P48 nucleotide sequences have revealed that gene variation lead to differences in immunological properties, but the gene in Iranian isolates are conservative and stable. The sequence variation in epitopes can be underlying source of antigen heterogeneity as a result, affect serological tests accuracy. Due to the high level of divergence in worldwide isolates and high degree of similarity in P48 protein of Iranian isolates, designing recombinant P48 protein based on local pattern can increase the sensitivity and consistency of serological test.


Subject(s)
Bacterial Proteins/genetics , Epitopes/genetics , Goats/microbiology , Mycoplasma agalactiae/genetics , Sheep/microbiology , Amino Acid Sequence , Animals , Bacterial Proteins/metabolism , Epitopes/metabolism , Iran , Mycoplasma agalactiae/classification , Phylogeny , Sequence Alignment
9.
Arch Razi Inst ; 72(4): 219-223, 2017 12.
Article in English | MEDLINE | ID: mdl-30315697

ABSTRACT

Contagious agalactia is an infectious syndrome of sheep that is characterized by mastitis with reduction of milk production, arthritis, abortion, and keratoconjunctivitis. The disease is rapidly spread by the contact of the infected animals with the healthy ones. Domestic sheep and goats of both sexes can be infected at an equivalent frequency. Most of the researchers use culture and molecular methods for the isolation and identification of Mycoplasma. Mycoplasma agalactiae is the main cause of the disease in sheep. The aim of this study was to isolate and identify M. agalactiae by using culture and polymerase chain reaction (PCR) assay in the sheep herds in Guilan province, Iran. A total of 71 specimens were collected from seven sheep herds with clinical signs of agalactia disease. All of the seven sheep herds (100%) were positive either in PPLO agar or Mycoplasma PCR test. Out of the 71 specimens, 50 (70.4%) cases were positive; however, 21 (29.6%) samples were negative. Furthermore, 40 (80%) cases of the positive samples were detected for the presence of Mycoplasma by the PCR method; nonetheless, 34 (68%) samples were positive in culture. Additionally, out of the 40 positive samples in Mycoplasma PCR, 11 (27.5%) samples were detected in M. agalactiae-specific PCR. The samples that were positive for Mycoplasma were mostly detected in the ear/vaginal, milk, and ear swab samples, respectively, by culture and PCR methods. The most positive samples of Mycoplasma / M. agalactiae were obtained from the ear and vaginal samples. Our findings demonstrated that Mycoplasma was one of the main etiological agents of the contagious agalactia in Guilan province. In addition, PCR was found to be more successful than the culture method in the detection of Mycoplasma.


Subject(s)
Mycoplasma Infections/veterinary , Mycoplasma agalactiae/isolation & purification , Sheep Diseases/epidemiology , Animals , Iran/epidemiology , Mycoplasma Infections/epidemiology , Mycoplasma Infections/microbiology , Polymerase Chain Reaction/veterinary , Prevalence , Sheep , Sheep, Domestic
10.
Arch Razi Inst ; 72(4): 237-242, 2017 12.
Article in English | MEDLINE | ID: mdl-30315700

ABSTRACT

Agalactia is an infectious and contagious disease of small ruminants caused by Mycoplasma agalactiae (M. agalactiae). Although different microorganism strains contribute to this disease, M. agalactiae is known as the most prominent causative agent. Therefore, this study aimed to investigate the rate of M. agalactiae involvement in contagious agalactia in the southeast region of Iran. Sampling was performed from milk, conjunctiva, ear lesions, and joints exudate of suspicious sheep and goat flocks according to the reports of Iran Veterinary Organization. The presence of Mycoplasma and its species, namely M. agalactiae, was evaluated through microbial culture and polymerase chain reaction (PCR) techniques. The detected microorganisms were confirmed to be Mycoplasma and M. agalactiae by the PCR amplification of 16S rRNA and lipoprotein target genes. According to the findings of present study, 14.8% and 36.0% of the samples were diagnosed as positive for Mycoplasma by culture and PCR, respectively. Moreover, the incidence of M. agalactiae was determined as 6.1% using the specific PCR method. Therefore, it is recommended to identify the other species of Mycoplasma in small ruminant samples involved with contagious agalactiae disease.


Subject(s)
Goat Diseases/epidemiology , Mycoplasma Infections/veterinary , Mycoplasma agalactiae/isolation & purification , Sheep Diseases/epidemiology , Animals , Goat Diseases/microbiology , Goats , Incidence , Iran/epidemiology , Mycoplasma Infections/epidemiology , Mycoplasma Infections/microbiology , Polymerase Chain Reaction/veterinary , Prevalence , RNA, Bacterial/analysis , RNA, Ribosomal, 16S/analysis , Sheep , Sheep Diseases/microbiology , Sheep, Domestic
11.
Arch Razi Inst ; 72(4): 243-248, 2017 12.
Article in English | MEDLINE | ID: mdl-30315701

ABSTRACT

Mycoplasma capricolum subspecies capricolum (Mcc) is one of the causative agents of contagious agalactia (CA), which is an important disease in sheep and goats in the Mediterranean and Middle East countries. Mycoplasma agalactiae is the classic agent of CA in sheep and goats. Mycoplasma mycoides subspecies Capri (Mmc), Mycoplasma capricolum subspecies capricolum (Mcc), and Mycoplasma putrefaciens (Mp) produce a clinically similar disease, more often in goats. The aim of the present study was to detect Mcc in sheep flocks in East Azerbaijan Province of Iran. Milk, ear canal, and eye swab samples were collected from 49 sheep flocks with clinical signs of CA or a history of a disease. All the samples were examined using both culture and molecular methods. In the molecular method,positive samples for the Mycoplasma genus were tested for M. mycoides cluster and Mcc. From 272 samples, 67, 87, and 62 samples were shown to be positive using the culture method, polymerase chain reaction (PCR) method, and both culture and PCR methods, respectively. Mcc was detected in all the four M. mycoides cluster positive samples, including milk, ear canal, and eye swab samples. This is the first report of Mcc detection from East Azerbaijan. Our results showed that eye, milk, and ear canal samples could be suitable sources for Mcc detection in sheep flocks.


Subject(s)
Mycoplasma capricolum/isolation & purification , Pleuropneumonia, Contagious/epidemiology , Sheep Diseases/epidemiology , Animals , Iran/epidemiology , Pleuropneumonia, Contagious/microbiology , Polymerase Chain Reaction/veterinary , Prevalence , Sheep , Sheep Diseases/microbiology , Sheep, Domestic
12.
Arch Razi Inst ; 72(3): 159-164, 2017 09.
Article in English | MEDLINE | ID: mdl-30341936

ABSTRACT

Contagious agalactia (CA) is a highly infectious disease of goats and sheep, and is a form of Mycoplasmosis, which is usually enzootic. Since Mycoplasma agalactiae (M. agalactiae) is the main cause of this disease in goats, the aim of this study was to isolate and detect M. agalactiae from semen of goat bucks. Thirty-nine semen samples were collected from goat bulks, and all samples were cultured in PPLO broth medium supplemented for M. agalaciae isolation. The bacteria DNAs were extracted from clinical samples and the PCR assay was applied to detect Mycoplasma genus and M. agalactiae species using specific primers, which amplified a 163bp fragment in 16SrRNA gene and a 375bp fragment in lipoprotein gene. The PCR evaluations were performed for both the clinical samples and the cultures. Out of the 39 samples, 29 (74.3%) of the cultures were shown positive and typical Mycoplasma colonies grew on PPLO agar, which could be considered as the diagnostic method. In addition, 38 (97.4%) samples had positive PCR results for Mycoplasma genus and six (15.3%) of the samples were shown to be positive using PCR for M. agalactiae as the diagnostic method. In the present study, M. agalactiae was detected in semen of goat bulks for the first time in Iran. Therefore, it is recommended to concern semen as one of the significant sources for this pathogen and the possibility for transmission to the female goats through semen is highlighted. Moreover, presence of this microorganism in semen could be involved in infertility of goat population.


Subject(s)
Goat Diseases/diagnosis , Goat Diseases/epidemiology , Mycoplasma Infections/veterinary , Mycoplasma agalactiae/isolation & purification , Semen/microbiology , Animals , Goat Diseases/microbiology , Goats , Iran/epidemiology , Male , Mycoplasma Infections/diagnosis , Mycoplasma Infections/epidemiology , Mycoplasma Infections/microbiology , Polymerase Chain Reaction/veterinary , Prevalence
13.
Avian Pathol ; 46(1): 36-43, 2017 Feb.
Article in English | MEDLINE | ID: mdl-27314285

ABSTRACT

Pigeons are considered as one of the major natural reservoirs in the epidemiology of Newcastle disease (ND). In this study, the partial sequence of fusion protein gene of 17 pigeon-origin ND viruses (NDVs) isolated during 2012-2013 in Iran was analysed. Since the studied isolates showed F0 protein cleavage sites compatible with velogenic NDVs, all were considered as virulent NDVs. Two isolates carried 112RRQKRF117 as the cleavage site motif, whereas the rest demonstrated 112KRQKRF117 motif which just recently has been reported among Iranian virulent NDVs. Phylogenetic analysis divided all these diverse isolates in two distinct clusters within class II genotype VI. Based on the partial fusion protein gene sequence, 15 out of 17 isolates showed the highest genetic identity to subgenotype VIb/2 and the other two isolates were placed in a distinct genetic group of genotype VI. Based on recent findings, at least two different sublineages of genotype VI are causing the ND outbreaks in the pigeon population and are circulating simultaneously along with virulent NDVs of genotype VII in various species in Iran. The continuing circulation of a diverse group of virulent NDVs as an enzootic in widespread species such as pigeon can cause outbreaks in commercial poultry flocks and also failure in controlling programmes. Therefore, the constant monitoring and awareness of the virus characteristics should be considered in controlling programmes against ND in Iran.


Subject(s)
Bird Diseases/virology , Columbidae/virology , Disease Outbreaks/veterinary , Genetic Variation , Newcastle Disease/virology , Newcastle disease virus/genetics , Animals , Bird Diseases/epidemiology , Chick Embryo , Female , Genotype , Iran/epidemiology , Newcastle Disease/epidemiology , Newcastle disease virus/isolation & purification , Newcastle disease virus/pathogenicity , Phylogeny , Sequence Analysis, RNA , Specific Pathogen-Free Organisms , Virulence
14.
Comp Clin Path ; 23(2): 347-352, 2014.
Article in English | MEDLINE | ID: mdl-32214974

ABSTRACT

The indirect immunoperoxidase (IIP) assay was compared with the reverse transcription-polymerase chain reaction (RT-PCR) for detection of 793/B serotype of infectious bronchitis virus in tissues samples collected from experimentally infected chickens. This technique was optimized in specific pathogen-free (SPF)-embryonated chicken eggs and broiler chickens inoculated with the Iranian IR/773/2001 strain of 793/B serotype The trachea, lung, kidney, and cecal tonsil tissue samples from experimentally infected chicken embryos and chickens were collected in order to prepare tissue sections in IIP assay and to detect in RT-PCR. The sensitivity and specificity values of IIP assay were, respectively, 83 and 84 %, and the positive and negative prediction values were 71 and 91 % when compared with RT-PCR.

15.
Avian Dis ; 54(2): 870-4, 2010 Jun.
Article in English | MEDLINE | ID: mdl-20608532

ABSTRACT

In the present study, the hemagglutinin genes from 12 influenza viruses of the H9N2 subtype were isolated from chicken flocks in different provinces of Iran from 2003 to 2005, amplified and sequenced. All of the 12 isolates showed similar sequences at the cleavage site, RSSF/GLF, bearing eight potential glycosylation sites and sharing the characteristic deduced amino acid residues alanine-190, glutamine-226, and glutamine-227 at the receptor-binding site. Ten out of these 12 isolates possessed leucine at position 226, which prevails in the sequences found in human H2 and H3 strains. Overall, the presence in these Iranian poultry H9N2 viruses of the sequence known to bind to human-type receptors and the presence of antibodies in the human population of Iran to H9N2 showed that it is possible for circulating H9N2 avian influenza viruses in Iran to infect humans. Hence, extensive surveillance of H9N2 in this country is highly recommended.


Subject(s)
Chickens , Hemagglutinins/genetics , Influenza A Virus, H9N2 Subtype/genetics , Influenza in Birds/epidemiology , Animals , Genetic Variation , Influenza in Birds/virology , Iran/epidemiology , Phylogeny , Time Factors
16.
Pak J Biol Sci ; 11(11): 1487-91, 2008 Jun 01.
Article in English | MEDLINE | ID: mdl-18817252

ABSTRACT

The aims of the present study were to isolate and serotype, determine the Seroprevalence, Drug susceptibility and diagnosis of infection by Polymerase Chain Reaction (PCR). In this study 460 serum samples and 220 tracheal swabs, 90 ovaries and oviduct swabs, 90 misshapen egg shells swabs were collected from 22 broiler breeder flocks of 5 companies. Serological results showed that all of the 22 flocks (100%) were positive for ORT infection. Ornithobacterium rhinotracheale (ORT) antibodies were detected in 289 (62/83%) out of the 460 serum samples. ORT was detected from tracheal swabs of seven flocks (31/81% or 3/18% out of 220 tracheal swabs). There was significant correlation between flock different ages and ORT titers (p<0.05), but correlation of flock ages and ORT isolates was not significantly different (p>0.05). Seven flocks infected with ORT were detected positive in PCR but bacteria were Isolated from only five culture. No ovaries and oviducts, misshapen egg shell swabs yielded ORT. A 784 bp fragment of the 16S rRNA gene was amplified using ORT specific primers in the PCR. All the isolates were identified as serotype A by Rapid Agglutination Test. Drug sensitivity test using standard disk diffusion technique was performed with 27 antibiotics. Antibiotic susceptibility for Quinolons family was seen more than the others and Cephalosporins family except to Cephalexin. The isolates were 80-100% susceptible to Tetracycline family and the most antibiotic resistant were seen for Aminopenicillins, Polypeptides, Sulfanamides and 80-100% resistant to Aminoglycoside family. Eighty percent of the isolates were resistant to Licomycin and 60% were moderate sensitive to Lincomycin. This study is the first report of prevalence of ORT, bacterial isolation, biochemical characteristics, serotyping and molecular method (PCR) in broiler breeder flocks in Guilan province of Iran.


Subject(s)
Chickens/microbiology , Ornithobacterium/isolation & purification , Animals , Base Sequence , DNA Primers , Enzyme-Linked Immunosorbent Assay , Iran , Microbial Sensitivity Tests , Ornithobacterium/drug effects , Polymerase Chain Reaction , Seroepidemiologic Studies
17.
Biologicals ; 35(2): 99-105, 2007 Apr.
Article in English | MEDLINE | ID: mdl-16879977

ABSTRACT

Presence of fimbriae on Escherichia coli isolated from the urine of patients with urinary tract infection was related to the ability of the bacteria to attach to human uroepithelial cells. One of the 50 isolates that expresses high MRHA p-fimbriae, selected and antibody against p-fimbriae from it, showed blocking of attachment of bacteria to HEP-2 cell in 1:1024 titer. Also, 1:512 titer of this antiserum to blocking of attachment in bladder tissue of mice is significant.


Subject(s)
Bacterial Adhesion , Escherichia coli/immunology , Escherichia coli/isolation & purification , Fimbriae Proteins/immunology , Larynx/microbiology , Urinary Bladder/microbiology , Animals , Antibodies/pharmacology , Bacterial Adhesion/immunology , Cells, Cultured , Epithelial Cells/immunology , Epithelial Cells/microbiology , Escherichia coli Infections/microbiology , Escherichia coli Infections/urine , Female , Fimbriae Proteins/isolation & purification , Fimbriae Proteins/urine , Fimbriae, Bacterial/immunology , Humans , Larynx/immunology , Mice , Mice, Inbred Strains , Microscopy, Electron, Scanning , Microscopy, Electron, Transmission , Rabbits , Urinary Bladder/immunology , Urinary Tract Infections/microbiology , Urinary Tract Infections/urine
18.
Microb Pathog ; 22(6): 331-41, 1997 Jun.
Article in English | MEDLINE | ID: mdl-9188088

ABSTRACT

Escherichia coli causing septicemia in poultry often possess F1 (type 1) and/or P fimbriae which may be involved in bacterial colonization and infection. To investigate the expression of these fimbriae in vivo, two pathogenic E. coli strains with different fimbrial profiles, TK3 (fim+/pap+) and MT78 (fim+/pap-), were administered to 2-week-old chickens by either the intratracheal or caudal thoracic air sac inoculation route. Antibodies specific for native F1 fimbriae were detected by ELISA and immunodot in the serum of chickens inoculated with either strain MT78 or strain TK3, irrespective of the route of inoculation. Antibodies specific for P fimbriae of serotype F11 were detected by ELISA and immunoblotting in the serum of chickens inoculated by either route with strain TK3. F1, but not P fimbriae, were expressed by bacteria colonizing the trachea of chickens inoculated by the air sac route with strain MT78 or TK3, as demonstrated by examination of frozen tissue sections using immunofluorescence. F1 fimbriae were also expressed by bacteria colonizing the air sacs and lungs, but not by bacteria in the blood or other internal organs, of chickens inoculated with either strain. P fimbriae were expressed by bacteria colonizing the air sacs, lungs, kidney, blood, and pericardial fluid, but not by bacteria colonizing the trachea, of chickens inoculated with strain TK3. Fimbriae-like structures were observed by electron microscopy on bacteria adhering to the epithelial cells of the air sacs of chickens inoculated with strain TK3. These results demonstrate that both strains MT78 and TK3 undergo in vivo phase variation with respect to their fimbrial profiles and site of bacterial colonization in different organs of infected chickens and suggest that F1 fimbriae are important for initial bacterial colonization of the upper respiratory tract whereas P fimbriae are important for later stages of the infection.


Subject(s)
Escherichia coli/pathogenicity , Fimbriae, Bacterial , Air Sacs , Animals , Antibodies, Bacterial/blood , Chickens , Disease Models, Animal , Escherichia coli/immunology , Escherichia coli/metabolism , Escherichia coli/ultrastructure , Escherichia coli Infections/microbiology , Fimbriae, Bacterial/immunology , Humans , Rabbits
19.
Avian Dis ; 41(1): 221-33, 1997.
Article in English | MEDLINE | ID: mdl-9087340

ABSTRACT

In order to study the dynamics of avian colibacillosis, commercial broiler chickens were inoculated with a pathogenic Escherichia coli strain (01:K1:H7) into the left caudal thoracic air sac. Chickens were euthanatized at different times from 3 to 48 hr postinoculation and examined for bacterial counts and macroscopic and microscopic lesions. The E. coli strain colonized the air sacs, lungs, and trachea and was recovered from blood and all tested extrarespiratory organs of inoculated birds. A gradual increase in bacterial counts in the trachea, lungs, air sacs, and liver was observed from 3 to 12 hr. Clinical signs and macroscopic lesions of colibacillosis were observed in all inoculated birds. Moderate to severe lesions of airsacculitis, pericarditis, perihepatitis, and splenic hypertrophy were observed. Microscopically, inflammatory cell infiltration, serious to fibrinous exudate, and cellular debris on serosal surfaces were present in the liver, spleen, and air sacs. In air sacs, heterophils were present in low numbers perivascularly 3 hr after inoculation and became more numerous by 24 hr postinoculation. Ultrastructurally, epithelial cells in the air sacs and in air capillary regions of the lung were swollen and vacuolated beginning at 3 hr postinoculation. Bacteria were adherent to and present within the epithelial cells at 3 hr postinoculation and were also seen in phagocytic cells and, rarely, in the connective tissue of these organs at 24 hr postinoculation. These results indicate that both air sacs and lungs can be the portal of entry for E. coli into the systemic circulation, probably via damaged epithelium.


Subject(s)
Escherichia coli Infections/veterinary , Escherichia coli/isolation & purification , Poultry Diseases , Air Sacs/microbiology , Air Sacs/pathology , Air Sacs/ultrastructure , Animals , Bacterial Adhesion , Chickens , Escherichia coli/pathogenicity , Escherichia coli Infections/microbiology , Escherichia coli Infections/physiopathology , Liver/microbiology , Lung/microbiology , Macrophages/microbiology , Macrophages/pathology , Macrophages/ultrastructure , Microscopy, Electron , Microvilli/microbiology , Microvilli/pathology , Spleen/microbiology , Time Factors , Trachea/microbiology , Virulence
20.
Vet Microbiol ; 58(2-4): 195-213, 1997 Nov.
Article in English | MEDLINE | ID: mdl-9453131

ABSTRACT

Virulence mechanisms of avian pathogenic Escherichia coli were investigated by inoculating commercial broiler chickens via the left caudal thoracic air sac with three highly pathogenic and three less pathogenic E. coli isolates. At 6 h postinoculation, all isolates had colonized the respiratory tract (trachea, lungs, and air sacs) and internal organs (liver, spleen, and kidney) of inoculated birds, but bacteria were recovered from pericardial fluid and blood only of birds inoculated with the more pathogenic isolates. F1 fimbriae were expressed on a high proportion of bacteria colonizing the trachea and to a lesser extent on bacteria in the lungs of birds inoculated with each of the isolates. F1 fimbriae were also expressed on bacteria in air sacs only for the less pathogenic isolates. P(F11) fimbriae were expressed on bacteria present in air sacs, lungs, kidney, blood, and pericardial fluid of birds inoculated with one of the more virulent isolates. On electron microscopy, bacteria of the more pathogenic isolates but not of the less pathogenic isolates were observed often associated with or within macrophages, which appeared to be viable, in the air sacs and lungs. In in vitro assays, the more pathogenic but not the less pathogenic isolates, were resistant to opsonization and phagocytosis in the absence of F1 fimbriae, whereas bacteria of all isolates were rapidly killed by avian macrophages when they expressed F1 fimbriae. These results suggest that resistance to phagocytosis may be an important mechanism in avian colisepticemia. They also suggest that F1 fimbrial phase variation to the nonfimbriated phase is favored in the avian lower respiratory tract, is more marked for the more pathogenic-isolates, and may be a virulence mechanism.


Subject(s)
Escherichia coli Infections/microbiology , Escherichia coli/pathogenicity , Fimbriae, Bacterial , Air Sacs/microbiology , Air Sacs/ultrastructure , Animals , Chickens , Escherichia coli/classification , Escherichia coli/ultrastructure , Fimbriae, Bacterial/ultrastructure , Genotype , Lung/microbiology , Lung/ultrastructure , Macrophages/microbiology , Microscopy, Electron , Phenotype , Virulence
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