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1.
Transbound Emerg Dis ; 64(6): 1837-1847, 2017 Dec.
Article in English | MEDLINE | ID: mdl-27667484

ABSTRACT

Bluetongue viruses (BTV) are arboviruses responsible for infections in ruminants. The confirmation of BTV infections is based on rapid serological tests such as enzyme-linked immunosorbent assays (ELISAs) using the BTV viral protein 7 (VP7) as antigen. The determination of the BTV serotype by serological analyses could be only performed by neutralization tests (VNT) which are time-consuming and require BSL3 facilities. VP2 protein is considered the major serotype-defining protein of BTV. To improve the serological characterization of BTV infections, the recombinant VP7 and BTV serotype 8 (BTV-8) VP2 were synthesized using insect cells expression system. The purified antigens were covalently bound to fluorescent beads and then assayed with 822 characterized ruminant sera from BTV vaccinations or infections in a duplex microsphere immunoassay (MIA). The revelation step of this serological duplex assay was performed with biotinylated antigens instead of antispecies conjugates to use it on different ruminant species. The results demonstrated that MIA detected the anti-VP7 antibodies with a high specificity as well as a competitive ELISA approved for BTV diagnosis, with a better efficiency for the early detection of the anti-VP7 antibodies. The VP2 MIA results showed that this technology is also an alternative to VNT for BTV diagnosis. Comparisons between the VP2 MIA and VNT results showed that VNT detects the anti-VP2 antibodies in an early stage and that the VP2 MIA is as specific as VNT. This novel immunoassay provides a platform for developing multiplex assays, in which the presence of antibodies against multiple BTV serotypes can be detected simultaneously.


Subject(s)
Antibodies, Viral/blood , Antigens, Viral/immunology , Bluetongue virus/immunology , Bluetongue/diagnosis , Capsid Proteins/immunology , Viral Core Proteins/immunology , Animals , Biotinylation , Bluetongue/virology , Bluetongue virus/isolation & purification , Enzyme-Linked Immunosorbent Assay/veterinary , Female , Immunoassay/veterinary , Male , Microspheres , Recombinant Proteins , Ruminants , Sensitivity and Specificity , Serogroup , Sheep
2.
Br J Cancer ; 112(4): 688-92, 2015 Feb 17.
Article in English | MEDLINE | ID: mdl-25602962

ABSTRACT

BACKGROUND: This study aimed to determine whether the BRCA1 haplotype was associated with trabectedin efficacy in soft-tissue sarcoma (STS) patients. METHODS: We analysed BRCA1 single-nucleotide polymorphisms (SNPs) in tumour specimens from 135 advanced STS patients enrolled in published phase 2 trials or in a compassionate-use programme of trabectedin. Forty-four advanced STS patients treated with doxorubicin and 85 patients with localised STS served as controls. The 6-month nonprogression rate and overall survival (OS) were analysed according to BRCA1 haplotype using log-rank tests. RESULTS: A favourable BRCA1 haplotype (presence of at least one AAAG allele) was significantly associated with an improved 6-month nonprogression rate. It was the only variable significantly associated with OS. No correlations were found between outcomes for patients with localised or advanced STS treated with doxorubicin. CONCLUSIONS: The BRCA1 haplotype represents a potential DNA repair biomarker that can be used for the prediction of response to trabectedin in STS patients.


Subject(s)
Antineoplastic Agents, Alkylating/therapeutic use , BRCA1 Protein/genetics , Dioxoles/therapeutic use , Sarcoma/drug therapy , Sarcoma/genetics , Soft Tissue Neoplasms/drug therapy , Soft Tissue Neoplasms/genetics , Tetrahydroisoquinolines/therapeutic use , Adolescent , Adult , Aged , Clinical Trials, Phase II as Topic/statistics & numerical data , Compassionate Use Trials/statistics & numerical data , Drug Resistance, Neoplasm/genetics , Female , Haplotypes , Humans , Male , Middle Aged , Polymorphism, Single Nucleotide , Sarcoma/mortality , Soft Tissue Neoplasms/mortality , Trabectedin , Treatment Outcome , Young Adult
3.
J Virol Methods ; 173(1): 49-59, 2011 Apr.
Article in English | MEDLINE | ID: mdl-21237207

ABSTRACT

Avian influenza viruses (AIVs) of the H5 and H7 subtypes can cause substantial economic losses in the poultry industry and are a potential threat to public health. Serosurveillance of poultry populations is an important monitoring tool and can also be used for control of vaccination campaigns. The purpose of this study was to develop broadly reactive, yet subtype-specific competitive ELISAs (cELISAs) for the specific detection of antibodies to the notifiable AIV subtypes H5 and H7 as an alternative to the gold standard haemagglutination inhibition assay (HI). Broadly reacting monoclonal competitor antibodies (mAbs) and genetically engineered subtype H5 or H7 haemagglutinin antigen, expressed and in vivo biotinylated in insect cells, were used to develop the cELISAs. Sera from galliform species and water fowl (n=793) were used to evaluate the performance characteristics of the cELISAs. For the H5 specific cELISA, 98.1% test sensitivity and 91.5% test specificity (97.7% and 90.2% for galliforms; 98.9% and 92.6% for waterfowl), and for the H7 cELISA 97.3% sensitivity and 91.8% specificity (95.3% and 98.9% for galliforms; 100% and 82.7% for waterfowl) were reached when compared to HI. The use of competitor mAbs with broad spectrum reactivity within an AIV haemagglutinin subtype allowed for homogenous detection with high sensitivity of subtype-specific antibodies induced by antigenically widely distinct isolates including antigenic drift variants. However, a trade-off regarding sensitivity versus nonspecific detection of interfering antibodies induced by phylo- and antigenically closely related subtypes, e.g., H5 versus H2 and H7 versus H15, must be considered. The observed intersubtype antibody cross-reactivity remains a disturbance variable in AIV subtype-specific serodiagnosis which negatively affects specificity.


Subject(s)
Influenza A virus/isolation & purification , Influenza in Birds/diagnosis , Influenza in Birds/virology , Virology/methods , Animals , Birds , Enzyme-Linked Immunosorbent Assay/methods , Hemagglutinin Glycoproteins, Influenza Virus/immunology , Influenza A virus/immunology , Sensitivity and Specificity
4.
Nat Med ; 7(8): 961-6, 2001 Aug.
Article in English | MEDLINE | ID: mdl-11479630

ABSTRACT

While investigating the novel anticancer drug ecteinascidin 743 (Et743), a natural marine product isolated from the Caribbean sea squirt, we discovered a new cell-killing mechanism mediated by DNA nucleotide excision repair (NER). A cancer cell line selected for resistance to Et743 had chromosome alterations in a region that included the gene implicated in the hereditary disease xeroderma pigmentosum (XPG, also known as Ercc5). Complementation with wild-type XPG restored the drug sensitivity. Xeroderma pigmentosum cells deficient in the NER genes XPG, XPA, XPD or XPF were resistant to Et743, and sensitivity was restored by complementation with wild-type genes. Moreover, studies of cells deficient in XPC or in the genes implicated in Cockayne syndrome (CSA and CSB) indicated that the drug sensitivity is specifically dependent on the transcription-coupled pathway of NER. We found that Et743 interacts with the transcription-coupled NER machinery to induce lethal DNA strand breaks.


Subject(s)
Antineoplastic Agents/pharmacology , Cell Division/drug effects , DNA Repair/drug effects , Dioxoles/pharmacology , Isoquinolines/pharmacology , Transcription, Genetic/drug effects , Animals , Blotting, Western , Cell Line , DNA Damage , DNA-Binding Proteins/genetics , Endonucleases , Genetic Complementation Test , Loss of Heterozygosity , Nuclear Proteins , Polymerase Chain Reaction , Tetrahydroisoquinolines , Trabectedin , Transcription Factors , Urochordata
5.
Cancer Res ; 61(5): 1964-9, 2001 Mar 01.
Article in English | MEDLINE | ID: mdl-11280753

ABSTRACT

In this study, we characterized the structure and function of topoisomerase I (top1) protein in the camptothecin (CPT)-resistant prostate cancer cell lines, DU-145/RC0.1 and DU-145/RC1 (RC0.1 and RC1, respectively). Both of the cell lines were previously selected by continuous exposure to 9-nitro-CPT. The RC0.1 and RC1 cells have high cross-resistance to CPT derivatives including SN-38 and topotecan, but are not cross-resistant to the non-top1 inhibitors etoposide, doxorubicin, and vincristine. Although the top1 protein levels were not decreased in the resistant cells compared with the parental cells, CPT-induced DNA cleavage was markedly reduced in the RC0.1 and RC1 nuclear extracts. The resistant-cell-line nuclear extracts also demonstrated top1 catalytic activity and resistance to CPT, in in vitro assays. Reverse transcription-PCR products from the resistant cell lines were sequenced, and revealed a point mutation resulting in a R364H mutation in the top1 of both RC0.1 and RC1. No wild-type top1 RNA or genomic DNA was detected in the resistant cell lines. Using a purified recombinant R364H top1, we found that the R364H mutant top1 was CPT resistant and fully active. In the published top1 crystal structure, the R364H mutation is close to the catalytic tyrosine and other well-known mutations leading to CPT resistance.


Subject(s)
Antineoplastic Agents, Phytogenic/pharmacology , Camptothecin/pharmacology , DNA Topoisomerases, Type I/genetics , Enzyme Inhibitors/pharmacology , Mutation , Prostatic Neoplasms/genetics , Amino Acid Sequence , Base Sequence , Catalysis , DNA Topoisomerases, Type I/metabolism , DNA, Viral/metabolism , Drug Resistance, Neoplasm/genetics , Humans , Male , Molecular Sequence Data , Prostatic Neoplasms/drug therapy , Prostatic Neoplasms/enzymology , Recombinant Proteins/antagonists & inhibitors , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Sequence Homology, Amino Acid , Simian virus 40/genetics , Topoisomerase I Inhibitors , Tumor Cells, Cultured
6.
Cancer Res ; 61(1): 53-8, 2001 Jan 01.
Article in English | MEDLINE | ID: mdl-11196197

ABSTRACT

Alkylating agents such as N-methyl-N'-nitro-N-nitrosoguanidine (MNNG) are known to covalently link alkyl groups at the position 6 of guanines (O6MG) in DNA. O6-alkylguanine-DNA alkyltransferase (AGT) specifically removes the methyl group of the O6MG. Using purified human topoisomerase I (Top1), we found an 8-10-fold enhancement of Top1 cleavage complexes when O6MG is incorporated in oligonucleotides at the +1 position relative to a unique Top1 cleavage site. Top1 poisoning by O6MG is attributable to a decrease of the Top1-mediated DNA religation as well as an increase in the enzyme cleavage step. Increased cleavage is probably linked to a change in the hydrogen bonding pattern, such as in the case of the 8-oxoguanine, whereas inhibition of religation could be attributed to altered base pairing, such as abasic sites or base mismatches, because incorporation of a 6-thioguanine did not affect Top1 activity. Top1-DNA covalent complexes are also induced in MNNG-treated CHO cells constitutively lacking the AGT enzyme. Conversely, no increase could be detected in CHO cells transfected with the wild-type human AGT. Moreover, we show that yeasts overexpressing the human Top1 are more sensitive to MNNG, whereas knock-out Top1 strain cells display some resistance to the drug. Altogether, these results suggest a role for Top1 poisoning by alkylated bases in the antiproliferative activity of alkylating agents as well as in the DNA lesions resulting from endogenous and carcinogenic DNA modifications.


Subject(s)
DNA Topoisomerases, Type I/metabolism , Guanine/analogs & derivatives , Guanine/metabolism , Methylnitronitrosoguanidine/toxicity , Alkylating Agents/toxicity , Animals , CHO Cells/drug effects , CHO Cells/enzymology , CHO Cells/metabolism , Cricetinae , DNA/metabolism , Humans , O(6)-Methylguanine-DNA Methyltransferase/deficiency , O(6)-Methylguanine-DNA Methyltransferase/genetics , O(6)-Methylguanine-DNA Methyltransferase/metabolism , Saccharomyces cerevisiae/drug effects , Saccharomyces cerevisiae/enzymology , Transfection
7.
Adv Cancer Res ; 80: 189-216, 2001.
Article in English | MEDLINE | ID: mdl-11034544

ABSTRACT

Topoisomerase I is a ubiquitous and essential enzyme in multicellular organisms. It is involved in multiple DNA transactions including DNA replication, transcription, chromosome condensation and decondensation, and probably DNA recombination. Besides its activity of DNA relaxation necessary to eliminate torsional stresses associated with these processes, topoisomerase I may have other functions related to its interaction with other cellular proteins. Topoisomerase I is the target of the novel anticancer drugs, the camptothecins. Recently a broad range of physiological and environmentally-induced DNA modifications have also been shown to poison topoisomerases. This review summarizes the various factors that enhance or suppress top1 cleavage complexes and discusses the significance of such effects. We also review the different mechanisms that have been proposed for the repair of topoisomerase I-mediated DNA lesions.


Subject(s)
DNA Damage , DNA Topoisomerases, Type I/chemistry , DNA Topoisomerases, Type I/physiology , Animals , Antineoplastic Agents/pharmacology , Catalysis , DNA/metabolism , DNA Repair , Humans , Models, Biological , Protein Binding , Protein Structure, Tertiary
8.
Article in English | MEDLINE | ID: mdl-11765806

ABSTRACT

Bulk and individual milk samples from 117 herds located in Brittany (west France) were used to assess: (i) the performance characteristics of an indirect enzyme-linked immunosorbent assay (ELISA) applied to individual milk for the detection of antibodies to bovine viral diarrhoea virus (BVDV); and (ii) the relationship between the bulk milk result obtained from this test and the within-herd prevalence of antibody-positive lactating cows. This ELISA test was based on a monoclonal antibody directed against non-structural protein NS2-3 of pestiviruses. At the individual level, based on 1113 matched milk/serum samples, the sensitivity and specificity of this test applied to milk, compared with the virus neutralization test on serum, were 95.0 and 97.7%, respectively. At the herd level, the relationship between the optical density percentage (OD%) of bulk milk and the within-herd prevalence of antibody-positive lactating cows was assessed using the receiver operating characteristics (ROC) analysis. Classes of OD% of bulk milk were determined so that they were associated with minimum intraclass and maximum between-class variances of within-herd prevalence of antibody-positive cows. The ROC analysis resulted in two classes of bulk milk results corresponding to different expected levels of within-herd prevalence. Herds with an OD% of bulk milk < 75% and > or = 75% had a mean observed prevalence of antibody-positive cows of 8.9 and 60.6%, respectively. Herds with a bulk milk result < 75% were expected to be BVDV free, whereas large variations in prevalence of antibody-positive cows existed in the herds with OD% > or = 75%. The test described in this study is suitable to identify herds likely to have a low prevalence of BVDV antibody-positive cows.


Subject(s)
Antibodies, Viral/analysis , Bovine Virus Diarrhea-Mucosal Disease/diagnosis , Diarrhea Viruses, Bovine Viral/immunology , Enzyme-Linked Immunosorbent Assay/veterinary , Milk/immunology , Animals , Bovine Virus Diarrhea-Mucosal Disease/immunology , Cattle , Enzyme-Linked Immunosorbent Assay/methods , Female , ROC Curve , Sensitivity and Specificity
9.
J Biol Chem ; 275(20): 15246-53, 2000 May 19.
Article in English | MEDLINE | ID: mdl-10809761

ABSTRACT

Eukaryotic DNA topoisomerase I (Top1p) catalyzes changes in DNA topology and is the cellular target of camptothecin. Recent reports of enzyme structure highlight the importance of conserved amino acids N-terminal to the active site tyrosine and the involvement of Asn-726 in mediating Top1p sensitivity to camptothecin. To investigate the contribution of this residue to enzyme catalysis, we evaluated the effect of substituting His, Asp, or Ser for Asn-726 on yeast Top1p. Top1N726S and Top1N726D mutant proteins were resistant to camptothecin, although the Ser mutant was distinguished by a lack of detectable changes in activity. Thus, a basic residue immediately N-terminal to the active site tyrosine is required for camptothecin cytotoxicity. However, replacing Asn-726 with Asp or His interfered with distinct aspects of the catalytic cycle, resulting in cell lethality. In contrast to camptothecin, which inhibits enzyme-catalyzed religation of DNA, the His substituent enhanced the rate of DNA scission, whereas the Asp mutation diminished the enzyme binding of DNA. Yet, these effects on enzyme catalysis were not mutually exclusive as the His mutant was hypersensitive to camptothecin. These results suggest distinct mechanisms of poisoning DNA topoisomerase I may be explored in the development of antitumor agents capable of targeting different aspects of the Top1p catalytic cycle.


Subject(s)
Asparagine , DNA Topoisomerases, Type I/chemistry , DNA Topoisomerases, Type I/metabolism , Plasmids/metabolism , Saccharomyces cerevisiae/enzymology , Amino Acid Substitution , Base Sequence , Binding Sites , Camptothecin/pharmacology , Enzyme Stability , Mutagenesis, Site-Directed , Nucleic Acid Conformation , Plasmids/chemistry , Saccharomyces cerevisiae/drug effects , Saccharomyces cerevisiae/growth & development , Substrate Specificity
10.
Proc Natl Acad Sci U S A ; 97(4): 1885-90, 2000 Feb 15.
Article in English | MEDLINE | ID: mdl-10677551

ABSTRACT

1-beta-d-Arabinofuranosylcytosine (Ara-C) is a nucleoside analog commonly used in the treatment of leukemias. Ara-C inhibits DNA polymerases and can be incorporated into DNA. Its mechanism of cytotoxicity is not fully understood. Using oligonucleotides and purified human topoisomerase I (top1), we found a 4- to 6-fold enhancement of top1 cleavage complexes when ara-C was incorporated at the +1 position (immediately 3') relative to a unique top1 cleavage site. This enhancement was primarily due to a reversible inhibition of top1-mediated DNA religation. Because ara-C incorporation is known to alter base stacking and sugar puckering at the misincorporation site and at the neighboring base pairs, the observed inhibition of religation at the ara-C site suggests the importance of the alignment of the 5'-hydroxyl end for religation with the phosphate group of the top1 phosphotyrosine bond. This study also demonstrates that ara-C treatment and DNA incorporation trap top1 cleavage complexes in human leukemia cells. Finally, we report that camptothecin-resistant mouse P388/CPT45 cells with no detectable top1 are crossresistant to ara-C, which suggests that top1 poisoning is a potential mechanism for ara-C cytotoxicity.


Subject(s)
Cytarabine/pharmacology , DNA Topoisomerases, Type I/metabolism , DNA/chemistry , Enzyme Induction/drug effects , Animals , Antineoplastic Agents/pharmacology , Camptothecin/pharmacology , Drug Resistance , Humans , Mice , Molecular Structure , Tumor Cells, Cultured
11.
Proc Natl Acad Sci U S A ; 97(5): 2040-5, 2000 Feb 29.
Article in English | MEDLINE | ID: mdl-10688881

ABSTRACT

The catalytic intermediates of DNA topoisomerase I (top1) are cleavage complexes that can relax DNA supercoiling (intramolecular reaction) or mediate recombinations (intermolecular religation). We report here that DNA adducts formed from benzo[a]pyrene bay-region diol epoxides can markedly affect top1 activity. Four oligonucleotide 22-mers of the same sequence were synthesized, each of which contained a stereoisomerically unique benzo[a]pyrene 7, 8-diol 9,10-epoxide adduct at the 2-amino group of a central 2'-deoxyguanosine residue. These four adducts correspond to either cis or trans opening at C-10 of the (+)-(7R, 8S, 9S, 10R)- or (-)-(7S, 8R, 9R, 10S)-7,8-diol 9,10-epoxides. Their solution conformations in duplex DNA (intercalated and minor-groove bound for the cis and trans opened adducts respectively) can be deduced from previous NMR studies. All four adducts completely suppress top1 cleavage activity at the alkylation site and induce the formation of new top1cleavage complexes on both strands of the DNA 3-6 bases away from the alkylation site. The trans opened adduct from the highly carcinogenic (+)-diol epoxide is the most active in inducing top1 cleavage independently of camptothecin, demonstrating that minor groove alkylation can efficiently poison top1. We also found that this isomer of the diol epoxide induces the formation of top1-DNA complexes in mammalian cells, which suggests a possible relationship between induction of top1 cleavage complexes and carcinogenic activity of benzo[a]pyrene diol epoxides.


Subject(s)
7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide , DNA Adducts , DNA Topoisomerases, Type I/metabolism , Animals , Binding Sites , CHO Cells , Cricetinae , Humans , Recombinant Fusion Proteins/metabolism , Recombination, Genetic
12.
Mol Pharmacol ; 56(3): 478-84, 1999 Sep.
Article in English | MEDLINE | ID: mdl-10462535

ABSTRACT

2, 5-bis(5-Hydroxymethyl-2-thienyl)furan (NSC 652287), is a representative of a series of thiophene derivatives that exhibit potent and selective antitumor activity against several tumor cell lines in the National Cancer Institute Anticancer Drug Screen. NSC 652287 has noticeable activity for the renal cell lines and produces cures in certain corresponding xenografts. The cellular mechanisms of action of NSC 652287 were therefore investigated in this study in greater detail. The most sensitive renal carcinoma cell line, A498, exhibited cell cycle arrest in G(0)-G(1) and G(2)-M at 10 nM NSC 652287, with increased p53 and p21(WAF1) protein. At higher concentrations, NSC 652287 still induced p53 elevation but with p21(WAF1) reduction and massive apoptosis. These results collectively suggested that NSC 652287 induced DNA damage. Using alkaline elution techniques, we found that NSC 652287 induced both DNA-protein and DNA-DNA cross-links with no detectable DNA single-strand breaks. These DNA-protein cross-links (DPC) persisted for at least 12 h after drug removal and their frequency was correlated with cytotoxicity in the renal cell lines studied. The most sensitive cells (A498) produced the highest DPC followed by the cell line with intermediate sensitivity (TK-10). DPC were minimal in the two resistant cell lines, ACHN and UO-31. Nonetheless, a similar degree of DPC occurred at doses imparting equitoxic effects. These results indicate that DNA is a primary target for the novel and potent anticancer thiophene derivative, NSC 652287. NSC 652287 did not cross-link purified DNA or mammalian topoisomerase I suggesting the importance of active metabolite(s) for the cross-linking activity.


Subject(s)
Antineoplastic Agents/pharmacology , Cross-Linking Reagents/pharmacology , DNA, Neoplasm/drug effects , Furans/pharmacology , Kidney Neoplasms/drug therapy , Apoptosis , Cell Division/drug effects , Cyclin-Dependent Kinase Inhibitor p21 , Cyclins/metabolism , DNA Topoisomerases, Type I/metabolism , DNA, Neoplasm/metabolism , Dose-Response Relationship, Drug , Drug Screening Assays, Antitumor , G2 Phase/drug effects , Humans , Kidney Neoplasms/genetics , Kidney Neoplasms/pathology , Mitosis/drug effects , Thiophenes/pharmacology , Tumor Cells, Cultured , Tumor Suppressor Protein p53/metabolism
13.
Mol Pharmacol ; 56(1): 77-84, 1999 Jul.
Article in English | MEDLINE | ID: mdl-10385686

ABSTRACT

Doxorubicin and idarubicin are very effective anticancer drugs in the treatment of human hematological malignancies and solid tumors. These agents are well known topoisomerase II poisons; however, some anthracycline analogs recently have been shown to poison topoisomerase I. In the present work, we assayed novel disaccharide analogs and the parent drug, idarubicin, for their poisoning effects of human topoisomerase I and topoisomerases IIalpha and IIbeta. Drugs were evaluated with a DNA cleavage assay in vitro and with a yeast system to test whether the agents were able to poison the enzymes in vivo. We have found that the test agents are potent poisons of both topoisomerases IIalpha and IIbeta. The axial orientation of the second sugar relative to the first one of the novel disaccharide analogs was shown to be required for poisoning activity and cytotoxicity. Interestingly, idarubicin and the new analogs stimulated topoisomerase I-mediated DNA cleavage at low levels in vitro. As expected, the cytotoxic level of the drug was highly affected by the content of topoisomerase II; nevertheless, the test agents had a yeast cell-killing activity that also was weakly dependent on cellular topoisomerase I content. The results are relevant for the full understanding of the molecular mechanism of topoisomerase poisoning by anticancer drugs, and they define structural determinants of anthracyclines that may help in the rational design of new compounds directed against topoisomerase I.


Subject(s)
Antibiotics, Antineoplastic/pharmacology , Idarubicin/pharmacology , Topoisomerase II Inhibitors , Antibiotics, Antineoplastic/chemistry , Base Sequence , Carbohydrate Sequence , Cell Division/drug effects , Doxorubicin/pharmacology , Humans , Idarubicin/analogs & derivatives , Molecular Sequence Data , Saccharomyces cerevisiae/drug effects , Topoisomerase I Inhibitors
14.
Proc Natl Acad Sci U S A ; 96(13): 7196-201, 1999 Jun 22.
Article in English | MEDLINE | ID: mdl-10377391

ABSTRACT

Ecteinascidin 743 (Et743, National Service Center 648766) is a potent antitumor agent from the Caribbean tunicate Ecteinascidia turbinata. Although Et743 is presently in clinical trials for human cancers, the mechanisms of antitumor activity of Et743 have not been elucidated. Et743 can alkylate selectively guanine N2 from the DNA minor groove, and this alkylation is reversed by DNA denaturation. Thus, Et743 differs from other DNA alkylating agents presently in the clinic (by both its biochemical activities and its profile of antitumor activity in preclinical models). In this study, we investigated cellular proteins that can bind to DNA alkylated by Et743. By using an oligonucleotide containing high-affinity Et743 binding sites and nuclear extracts from human leukemia CEM cells, we purified a 100-kDa protein as a cellular target of Et743 and identified it as topoisomerase I (top1). Purified top1 was then tested and found to produce cleavage complexes in the presence of Et743, whereas topoisomerase II had no effect. DNA alkylation was essential for the formation of top1-mediated cleavage complexes by Et743, and the distribution of the drug-induced top1 sites was different for Et743 and camptothecin. top1-DNA complexes were also detected in Et743-treated CEM cells by using cesium chloride gradient centrifugation followed by top1 immunoblotting. These data indicate that DNA minor groove alkylation by Et743 induces top1-mediated protein-linked DNA breaks and that top1 is a target for Et743 in vitro and in vivo.


Subject(s)
Antineoplastic Agents, Alkylating/chemistry , Antineoplastic Agents, Alkylating/pharmacology , DNA Topoisomerases, Type I/chemistry , DNA Topoisomerases, Type I/pharmacology , Dioxoles/chemistry , Dioxoles/pharmacology , Isoquinolines/chemistry , Isoquinolines/pharmacology , Alkylation , Animals , DNA/chemistry , DNA/drug effects , Humans , Tetrahydroisoquinolines , Trabectedin , Tumor Cells, Cultured , Urochordata
15.
Nucleic Acids Res ; 27(8): 1919-25, 1999 Apr 15.
Article in English | MEDLINE | ID: mdl-10101202

ABSTRACT

In this study, we report that eukaryotic topoisomerase I (top1) can linearize the open circular DNA of duck hepatitis B virus (DHBV). Using synthetic oligonucleotides mimicking the three-strand flap DR1 region of the DHBV genome, we found that top1 cleaves the DNA plus strand in a suicidal manner, which mimics the linearization of the virion DNA. We also report that top1 can cleave the DNA minus strand at specific sites and can linearize the minus strand via a non-homologous recombination reaction. These results are consistent with the possibility that top1 can act as a DNA endo-nuclease and strand transferase and play a role in the circularization, linearization and possibly integration of viral replication intermediates.


Subject(s)
DNA Topoisomerases, Type I/metabolism , DNA, Viral/metabolism , Hepatitis B Virus, Duck/genetics , Recombination, Genetic , Animals , Base Sequence , Binding Sites , Chickens , Chromosome Mapping , DNA, Single-Stranded , Ducks/virology , Humans , Molecular Sequence Data , Sequence Analysis, DNA , Tumor Cells, Cultured , Virion
16.
J Biol Chem ; 274(13): 8516-23, 1999 Mar 26.
Article in English | MEDLINE | ID: mdl-10085084

ABSTRACT

We recently showed that abasic sites, uracil mismatches, nicks, and gaps can trap DNA topoisomerase I (top1) when these lesions are introduced in the vicinity of a top1 cleavage site (Pourquier, P., Ueng, L.-M., Kohlhagen, G., Mazumder, A., Gupta, M., Kohn, K. W., and Pommier, Y. (1997) J. Biol. Chem. 272, 7792-7796; Pourquier, P., Pilon, A. A., Kohlhagen, G., Mazumder, A., Sharma, A., and Pommier, Y. (1997) J. Biol. Chem. 26441-26447). In this study, we investigated the effects on top1 of an abundant base damage generated by various oxidative stresses: 7,8-dihydro-8-oxoguanine (8-oxoG). Using purified eukaryotic top1 and oligonucleotides containing the 8-oxoG modification, we found a 3-7-fold increase in top1-mediated DNA cleavage when 8-oxoG was present at the +1 or +2 position relative to the cleavage site. Another oxidative lesion, 5-hydroxycytosine, also enhanced top1 cleavage by 2-fold when incorporated at the +1 position of the scissile strand. 8-oxoG at the +1 position enhanced noncovalent top1 DNA binding and had no detectable effect on DNA religation or on the incision step. top1 trapping by 8-oxoG was markedly enhanced when asparagine adjacent to the catalytic tyrosine was mutated to histidine, suggesting a direct interaction between this residue and the DNA major groove immediately downstream from the top1 cleavage site. Altogether, these results demonstrate that oxidative base lesions can increase top1 binding to DNA and induce top1 cleavage complexes.


Subject(s)
Cytosine/analogs & derivatives , DNA Damage/genetics , DNA Topoisomerases, Type I/metabolism , Guanosine/analogs & derivatives , Camptothecin/pharmacology , Cytosine/pharmacology , DNA/metabolism , DNA Topoisomerases, Type I/genetics , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Guanosine/pharmacology , Humans , Kinetics , Molecular Structure , Mutation/genetics , Oligonucleotides/metabolism , Oxidative Stress
17.
Mol Cell Biol ; 19(3): 1673-85, 1999 Mar.
Article in English | MEDLINE | ID: mdl-10022855

ABSTRACT

This report demonstrates that Gadd45, a p53-responsive stress protein, can facilitate topoisomerase relaxing and cleavage activity in the presence of core histones. A correlation between reduced expression of Gadd45 and increased resistance to topoisomerase I and topoisomerase II inhibitors in a variety of human cell lines was also found. Gadd45 could potentially mediate this effect by destabilizing histone-DNA interactions since it was found to interact directly with the four core histones. To evaluate this possibility, we investigated the effect of Gadd45 on preassembled mononucleosomes. Our data indicate that Gadd45 directly associates with mononucleosomes that have been altered by histone acetylation or UV radiation. This interaction resulted in increased DNase I accessibility on hyperacetylated mononucleosomes and substantial reduction of T4 endonuclease V accessibility to cyclobutane pyrimidine dimers on UV-irradiated mononucleosomes but not on naked DNA. Both histone acetylation and UV radiation are thought to destabilize the nucleosomal structure. Hence, these results imply that Gadd45 can recognize an altered chromatin state and modulate DNA accessibility to cellular proteins.


Subject(s)
Chromatin , DNA Damage , Heat-Shock Proteins/metabolism , Proteins/metabolism , Animals , Cell Line , DNA Topoisomerases, Type I/metabolism , Drosophila , HeLa Cells , Histones , Humans , Intracellular Signaling Peptides and Proteins , Nucleosomes , Tumor Cells, Cultured , Tumor Suppressor Protein p53/metabolism , GADD45 Proteins
18.
Methods Mol Med ; 28: 95-110, 1999.
Article in English | MEDLINE | ID: mdl-21374031

ABSTRACT

DNA topoisomerases I and II (top1 and top2, respectively) are ubiquitous enzymes that play an essential role in transcription, replication, chromosome segregation, and DNA repair. The basic enzymatic reaction of topoisomerases, namely reversible DNA nicking, is a transesterification reaction where a DNA phosphodiester bond is transferred to a specific enzyme tyrosine residue. Eukaryotic top1 and top2 exhibit major differences concerning their mechanism of action. Top1 acts as a monomer and forms a covalent bond with the 3'-terminus of a DNA single-strand break (1-3) whereas top2 acts as an homodimer and forms a covalent bond with the 5'-terminus of the DNA double-strand break with a four base-pairs overhang (Fig. 1) (1-4). No energy cofactor is required for top1 activity, whereas top2 hydrolyzes adenosine triphosphate (ATP) during its catalytic cycle. Fig. 1. Top1- and top2-cleavage complexes. (A) Top1 acts as a monomer, makes a single-strand break and covalently binds to the 3'-end of the break, leaving a 5'-hydroxyl end. (B) Top2 acts as a dimer, and generally makes a double-strand break. Each strand is cleaved by one monomer, with a 4-base overhang. Each monomer covalently binds to the 5'-end of the break and leaves a 3'-hydroxyl end.

19.
J Biol Chem ; 273(42): 27245-9, 1998 Oct 16.
Article in English | MEDLINE | ID: mdl-9765247

ABSTRACT

We used purified mammalian topoisomerases I (top1) and oligonucleotides to study top1-mediated cleavage and religation in the presence of a potent carcinogenic adduct, 1,N6-ethenoadenosine (epsilonA) incorporated immediately downstream of a unique top1 cleavage site. We found tha epsilonA markedly enhanced top1 cleavage complexes when it was incorporated at the +1 position of the top1 cleavage. This enhancement was due to a reduction of the religation step of the top1 reaction. In addition, epsilonA reduced the top1-mediated cleavage and decreased binding of the enzyme to DNA. We also studied the effects of the epsilonA adduct on top1 trapping by camptothecin (CPT), a well known top1 inhibitor. CPT was inactive when epsilonA was present at the +1 position. Alkylation of the top1 cleavage complex by 7-chloromethyl-10,11-methylenedioxycamptothecin (7-ClMe-MDO-CPT) was also blocked by the epsilonA adduct. Altogether, these results demonstrate that the epsilonA carcinogenic adduct can efficiently trap human top1 and mimic CPT effects. Normal hydrogen bonding of the base pairs immediately downstream from the top1 cleavage site is probably essential for efficient DNA religation and binding of camptothecins in the top1 cleavage complex.


Subject(s)
Adenine/analogs & derivatives , Carcinogens/metabolism , DNA Adducts/metabolism , DNA Topoisomerases, Type I/metabolism , Vinyl Chloride/metabolism , Adenine/metabolism , Base Pairing , Camptothecin , Humans , Molecular Mimicry
20.
Biochim Biophys Acta ; 1400(1-3): 83-105, 1998 Oct 01.
Article in English | MEDLINE | ID: mdl-9748515

ABSTRACT

DNA topoisomerase I is essential for cellular metabolism and survival. It is also the target of a novel class of anticancer drugs active against previously refractory solid tumors, the camptothecins. The present review describes the topoisomerase I catalytic mechanisms with particular emphasis on the cleavage complex that represents the enzyme's catalytic intermediate and the site of action for camptothecins. Roles of topoisomerase I in DNA replication, transcription and recombination are also reviewed. Because of the importance of topoisomerase I as a chemotherapeutic target, we review the mechanisms of action of camptothecins and the other topoisomerase I inhibitors identified to date.


Subject(s)
Camptothecin/pharmacology , DNA Topoisomerases, Type I/physiology , Antineoplastic Agents/pharmacology , Camptothecin/therapeutic use , DNA/metabolism , Drug Resistance/genetics , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/pharmacology , Intercalating Agents/chemistry , Intercalating Agents/pharmacology , Models, Molecular , Molecular Structure , Polycyclic Compounds/chemistry , Polycyclic Compounds/pharmacology , Topoisomerase I Inhibitors
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