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1.
Hernia ; 19(3): 513-6, 2015 Jun.
Article in English | MEDLINE | ID: mdl-24474033

ABSTRACT

OBJECTIVE: To describe the incidence and treatment of prevascular and retropsoas hernias in a large-volume general surgery practice. BACKGROUND: Femoral hernias are considered uncommon with an incidence between 2 and 8 % of groin hernias. There are no large studies describing the subtypes of femoral hernias or retropsoas hernias, and therefore no reported incidence or standardized treatment recommendations for these hernias exist. METHODS: This study is a retrospective review of all patients undergoing total extraperitoneal (TEP) laparoscopic herniorrhaphy between August 1993 and December 2011. A single surgeon performed all the repairs. Demographics and patient outcomes were reported. RESULTS: 2,436 patients underwent 3,242 TEP repairs. The subtypes were: indirect 1,523 (46.9 %), direct 1,473 (45.4 %), femoral 156 (4.8 %), obturator 35 (1.1 %), prevascular 25 (0.77 %), Spigelian 20 (0.61 %), retropsoas 3 (0.09 %). Prevascular hernias accounted for 16 % of femoral hernias. Patients with prevascular hernias had a mean age of 70.3 years and were all male. 13 of the 25 patients (52 %) with prevascular hernias had other associated defects and four (16 %) of the patients had prevascular hernias as a recurrence from a prior hernia operation. There were three patients with retropsoas hernias that only would not have been seen from an anterior open approach. There are no intraoperative complications or known recurrences from this study group. CONCLUSIONS: Prevascular and retropsoas hernias are uncommon, but have a higher incidence than previously believed. Prevascular hernias tend to be associated with older age and other defects. The diagnosis and management of these hernias are readily achieved using the laparoscopic TEP approach.


Subject(s)
Hernia, Abdominal/surgery , Adult , Female , Hernia, Abdominal/epidemiology , Hernia, Femoral/epidemiology , Hernia, Femoral/surgery , Herniorrhaphy , Humans , Incidence , Laparoscopy , Male , Middle Aged , Retrospective Studies
2.
Hernia ; 17(1): 81-4, 2013 Feb.
Article in English | MEDLINE | ID: mdl-22581201

ABSTRACT

INTRODUCTION: Level 1 data suggest that mesh reinforcement of the crural closure for hiatal hernia repair decreases the recurrence of hernia. The fear of erosion of the prosthetic into the esophagus has kept the use of mesh for hiatal hernia repair from becoming routine. A recent study found several cases of esophageal stenosis/erosion from the use of a biologic mesh. For these reasons, we evaluated a new resorptive prosthetic and new method of fixation of the prosthetic for crural reinforcement during hiatal hernia repair. METHODS: From February 2009 until December 2010, 70 patients underwent hiatal hernia repair using a synthetic bioabsorbable prosthetic made of polglycolide and teimethylene carbonate (Gore BioA Tissue Reinforcement™, Flagstaff, AZ). There were 48 patients with paraesophageal hiatal hernias and 22 with large sliding hiatal hernias. In this study, a square piece of mesh just the size to cover the crural closure only was utilized. Fibrin glue (Tisseel™) was applied over the suture closure of the crura, the mesh was then placed over the glue and held in place for several seconds, and then more fibrin glue was applied on top of the mesh. RESULTS: The new bioabsorbable polymer mesh was readily placed through a 10-mm trocar, had good handling characteristics laparoscopically, and no pre-operative preparation was required of the prosthetic. The material and the fibrin glue created a very substantial reinforcement of the crural closure, and the average time to place and fix the mesh was approximately 5 min. There were no short-term complications from the mesh, and no patient has had any significant post-operative sequelae. CONCLUSION: Crural closure reinforcement during hiatal hernia repair can be done readily with this new bioabsorbable polymer-based mesh. Fibrin glue fixation of this new prosthetic can be done quickly and it creates a strong, fixed barrier that may decrease the chance of erosion. Further studies will need to be done to evaluate long-term efficacy and complications associated with its use.


Subject(s)
Fibrin Tissue Adhesive/therapeutic use , Hernia, Hiatal/surgery , Herniorrhaphy/methods , Prosthesis Implantation/methods , Tissue Adhesives/therapeutic use , Absorbable Implants/adverse effects , Female , Humans , Laparoscopy , Male , Middle Aged , Surgical Mesh/adverse effects
3.
J Immunoassay Immunochem ; 33(1): 91-113, 2012 Jan.
Article in English | MEDLINE | ID: mdl-22181824

ABSTRACT

This study systematically validated two quantitative enzyme-linked immunosorbent assays (ELISAs) for determining Yersinia pestis anti-F1 or anti-V IgG concentration in cynomolgus macaque sera. The results demonstrated that these ELISAs are reliable, reproducible, and suitable for their intended use to measure both anti-F1 and anti-V IgG in monkey sera following vaccination with a heterologous recombinant fusion F1-V protein (rF1-V). Statistical analysis demonstrated assay precision, accuracy, specificity, linearity/dilutional linearity, and robustness for both assays. The quantitative ranges of standard curves were defined as 40-700 ng/mLfor both anti-F1 and anti-V IgG. Either serological assay could be used to determine potency of F1/V antigen-based vaccines in surrogate clinical studies or to define correlates of protective immunity against plague under the Food and Drug Administration's (FDA) two-animal rule.


Subject(s)
Antibodies, Bacterial/blood , Antibodies, Bacterial/immunology , Antigens, Bacterial/immunology , Enzyme-Linked Immunosorbent Assay/standards , Macaca/immunology , Macaca/microbiology , Pore Forming Cytotoxic Proteins/immunology , Animals , Female , Macaca/blood , Male
4.
Vaccine ; 28(4): 934-9, 2010 Jan 22.
Article in English | MEDLINE | ID: mdl-19925906

ABSTRACT

A recombinant fusion protein composed of Yersinia pestis fraction 1 capsule (F1) and virulence-associated V antigen (V) (F1-V) has been developed as the next-generation vaccine against plague. In this study, female Swiss Webster mice received a single intramuscular vaccination with one of eight doses of the F1-V vaccine and exposed 4 weeks later to either Y. pestis CO92 or C12 organisms by the subcutaneous or aerosol routes of infection. Quantitative anti-F1 and anti-V immunoglobulin G (IgG) ELISAs were used to examine the relationship between survival outcome and antibody titers to F1 and V. Results suggested that each 1log(10) increase in week 4 quantitative anti-F1 and anti-V IgG ELISA titers were associated with a 1.7-fold (p=0.0051) and 2.5-fold (p=0.0054) increase in odds of survival, respectively, against either bubonic or pneumonic plague and may serve as serological correlates of protection.


Subject(s)
Antibodies, Bacterial/blood , Antigens, Bacterial/immunology , Bacterial Proteins/immunology , Enzyme-Linked Immunosorbent Assay/methods , Plague/prevention & control , Pore Forming Cytotoxic Proteins/immunology , Yersinia pestis/immunology , Animals , Biomarkers , Female , Immunoglobulin G/blood , Mice , Recombinant Fusion Proteins/immunology , Survival Analysis
5.
Vaccine ; 24(17): 3469-76, 2006 Apr 24.
Article in English | MEDLINE | ID: mdl-16519970

ABSTRACT

The next-generation human anthrax vaccine developed by the United States Army Medical Research Institute of Infectious Diseases (USAMRIID) is based upon purified Bacillus anthracis recombinant protective antigen (rPA) adsorbed to aluminum hydroxide adjuvant (Alhydrogel). In addition to being safe, and effective, it is important that such a vaccine be fully characterized. Four major protein isoforms detected in purified rPA by native PAGE during research and development were reduced to two primary isoforms in bulk material produced by an improved process performed under Good Manufacturing Practices (GMP). Analysis of both rPA preparations by a protein-isoaspartyl-methyl-transferase assay (PIMT) revealed the presence of increasing amounts of iso-aspartic acid correlating with isoform content and suggesting deamidation as the source of rPA charge heterogeneity. Additional purification of GMP rPA by anion exchange chromatography separated and enriched the two principal isoforms. The in vitro and in vivo biological activities of each isoform were measured in comparison to the whole GMP preparation. There was no significant difference in the biological activity of each isoform compared to GMP rPA when analyzed in the presence of lethal factor using a macrophage lysis assay. Vaccination with the two individual isoforms revealed no differences in cytotoxicity neutralization antibody titers when compared to the GMP preparation although one isoform induced more anti-PA IgG antibody than the GMP material. Most importantly, each of the two isoforms as well as the whole GMP preparation protected 90-100% of rabbits challenged parenterally with 129 LD50 of B. anthracis Ames spores. The equivalent biological activity and vaccine efficacy of the two isoforms suggests that further processing to separate isoforms is unnecessary for continued testing of this next-generation anthrax vaccine.


Subject(s)
Anthrax Vaccines/immunology , Anthrax/prevention & control , Antigens, Bacterial/immunology , Bacterial Toxins/immunology , Vaccines, Synthetic/immunology , Animals , Antigens, Bacterial/analysis , Antigens, Bacterial/isolation & purification , Bacterial Toxins/analysis , Bacterial Toxins/isolation & purification , Protein Isoforms , Rabbits , Recombinant Proteins/immunology , Spores, Bacterial
6.
Genomics ; 67(1): 78-82, 2000 Jul 01.
Article in English | MEDLINE | ID: mdl-10945472

ABSTRACT

Era is an essential GTPase that is required for proper cell cycle progression and cell division in Escherichia coli and is found in nearly all bacteria sequenced to date. To determine whether Era is also present in eukaryotic organisms, we searched the dbEST database and found EST clones coding for proteins that were similar to Era. Full sequencing of these ESTs from human and mouse identified a conserved homologue, ERAL1 (Era-like 1). ERAL1 maps to 17q11.2 in human and is located in the syntenic region of mouse chromosome 11. ERAL1 may be an attractive candidate for a tumor suppressor gene since ERAL1 is located in a chromosomal region where loss of heterozygosity is often associated with various types of cancer.


Subject(s)
Escherichia coli Proteins , Escherichia coli/genetics , GTP Phosphohydrolases/genetics , GTP-Binding Proteins/genetics , RNA-Binding Proteins , Amino Acid Sequence , Animals , Blotting, Northern , Cell Cycle/physiology , Cell Division/genetics , Chromosomes, Human, Pair 17 , Cloning, Molecular , Databases, Factual , Escherichia coli/metabolism , Expressed Sequence Tags , GTP Phosphohydrolases/metabolism , GTP-Binding Proteins/metabolism , Genes, Tumor Suppressor , Humans , In Situ Hybridization, Fluorescence , Mice , Molecular Sequence Data , Physical Chromosome Mapping , Sequence Homology, Amino Acid , Tissue Distribution
7.
FEBS Lett ; 445(2-3): 425-30, 1999 Feb 26.
Article in English | MEDLINE | ID: mdl-10094501

ABSTRACT

ERA is an essential GTPase widely conserved in bacteria. Homologues of ERA are also present in higher eukaryotic cells. ERA is involved in bacterial cell cycle control at a point preceding cell division. In order to aid the functional investigation of ERA and to facilitate structure-function studies, we have undertaken the X-ray crystallographic analysis of this protein. Here, we report the purification and crystallization procedures and results. The purified ERA exhibits nucleotide-binding activity and GTP-hydrolytic activity. ERA is one of the very few multi-domain GTPases crystallized to date.


Subject(s)
Bacterial Proteins/isolation & purification , Escherichia coli Proteins , Escherichia coli/enzymology , GTP Phosphohydrolases/isolation & purification , GTP-Binding Proteins/isolation & purification , RNA-Binding Proteins , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Chromatography, Affinity , Crystallization , GTP Phosphohydrolases/chemistry , GTP Phosphohydrolases/genetics , GTP Phosphohydrolases/metabolism , GTP-Binding Proteins/chemistry , GTP-Binding Proteins/genetics , GTP-Binding Proteins/metabolism , Gene Expression , Guanosine Diphosphate/metabolism
8.
Mol Microbiol ; 27(4): 739-50, 1998 Feb.
Article in English | MEDLINE | ID: mdl-9515700

ABSTRACT

Era is a low-molecular-weight GTPase essential for Escherichia coli viability. The gene encoding Era is found in the rnc operon, and the synthesis of both RNase III and Era increases with growth rate. Mutants that are partially defective in Era GTPase activity or that are reduced in the synthesis of wild-type Era become arrested in the cell cycle at the predivisional two-cell stage. The partially defective Era GTPase mutation (era1) suppresses several temperature-sensitive lethal alleles that affect chromosome replication and chromosome partitioning but not cell division. Our results suggest that Era plays an important role in cell cycle progression at a specific point in the cycle, after chromosome partitioning but before cytokinesis. Possible functions for Era in cell cycle progression and the initiation of cell division are discussed.


Subject(s)
Cell Cycle/physiology , Cytoskeletal Proteins , Escherichia coli Proteins , Escherichia coli/physiology , GTP Phosphohydrolases/genetics , GTP-Binding Proteins/genetics , Mutation , RNA-Binding Proteins , Amino Acid Sequence , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Cell Division/genetics , DNA Replication , DNA Transposable Elements , Endoribonucleases/genetics , Endoribonucleases/metabolism , GTP Phosphohydrolases/metabolism , GTP-Binding Proteins/metabolism , Humans , Molecular Sequence Data , Phenotype , Ribonuclease III , Sequence Homology, Amino Acid , Temperature
9.
J Bacteriol ; 180(5): 1053-62, 1998 Mar.
Article in English | MEDLINE | ID: mdl-9495742

ABSTRACT

Inactivation of transcription factor sigma54, encoded by rpoN (glnF), restores high-temperature growth in Luria-Bertani (LB) medium to strains containing the heat-sensitive cell division mutation ftsZ84. Mutational defects in three other genes involved in general nitrogen control (glnD, glnG, and glnL) also suppress lethal filamentation. Since addition of glutamine to LB medium fully blocks suppression by each mutation, the underlying cause of suppression likely derives from a stringent response to the limitation of glutamine. This model is supported by several observations. The glnL mutation requires RelA-directed synthesis of the nutrient alarmone ppGpp to suppress filamentation. Artificially elevated levels of ppGpp suppress ftsZ84, as do RNA polymerase mutations that reproduce global effects of the ppGpp-induced state. Both the glnF null mutation and an elevated copy number of the relA gene similarly affect transcription from the upstream (pQ) promoters of the ftsQAZ operon, and both of these genetic conditions increase the steady-state level of the FtsZ84 protein. Physiological suppression of ftsZ84 by a high salt concentration was also shown to involve RelA. Additionally, we found that the growth of a glnF or glnD strain on LB medium depends on RelA or supplemental glutamine in the absence of RelA function. These data expand the roles for ppGpp in the regulation of glutamine metabolism and the expression of FtsZ during cell division.


Subject(s)
Bacterial Proteins/genetics , DNA-Binding Proteins , Escherichia coli Proteins , Escherichia coli/genetics , Escherichia coli/metabolism , Gene Expression Regulation, Bacterial , Glutamine/metabolism , Guanosine Tetraphosphate/metabolism , Bacterial Proteins/biosynthesis , Cell Division , Culture Media , DNA-Directed RNA Polymerases/genetics , Escherichia coli/cytology , Genes, Bacterial , Guanosine Tetraphosphate/biosynthesis , Ligases/genetics , Ligases/metabolism , Mutation , Nitrogen Fixation/genetics , Operon , RNA Polymerase Sigma 54 , Sigma Factor/genetics , Sodium Chloride/pharmacology , Suppression, Genetic , Transcription, Genetic
10.
J Bacteriol ; 179(14): 4575-82, 1997 Jul.
Article in English | MEDLINE | ID: mdl-9226268

ABSTRACT

Two suppressor mutations of the temperature-sensitive DNA primase mutant dnaG2903 have been characterized. The gene responsible for suppression, era, encodes an essential GTPase of Escherichia coli. One mutation, rnc-15, is an insertion of an IS1 element within the leader region of the rnc operon and causes a polar defect on the downstream genes of the operon. A previously described polar mutation, rnc-40, was also able to suppress dnaG2903. The other mutation, era-1, causes a single amino acid substitution (P17R) in the G1 region of the GTP-binding domain of Era. Analysis of the GTPase activity of the Era-1 mutant protein showed a four- to five-fold decrease in the ability to convert GTP to GDP. Thus, lowered expression of wild-type Era caused by the polar mutations and reduced GTPase activity caused by the era-1 mutation suppresses dnaG2903 as well as a second dnaG allele, parB. Phenotypic analysis of the era-1 mutant at 25 degrees C showed that 10% of the cells contain four segregated nucleoids, indicative of a delay in cell division. Possible mechanisms of suppression of dnaG and roles for Era are discussed.


Subject(s)
Escherichia coli Proteins , Escherichia coli/genetics , GTP Phosphohydrolases/genetics , GTP-Binding Proteins/genetics , RNA Nucleotidyltransferases/genetics , RNA-Binding Proteins , Suppression, Genetic , Alleles , Amino Acid Sequence , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , DNA Primase , Escherichia coli/growth & development , Escherichia coli/metabolism , GTP Phosphohydrolases/metabolism , GTP-Binding Proteins/metabolism , Genes, Bacterial , Genes, Suppressor , Guanosine Triphosphate/metabolism , Molecular Sequence Data , Operon , Phenotype , Temperature
11.
J Biol Chem ; 270(9): 4822-39, 1995 Mar 03.
Article in English | MEDLINE | ID: mdl-7876255

ABSTRACT

Two rpoN-linked delta Tn10-kan insertions suppress the conditionally lethal erats allele. One truncates rpoN while the second disrupts another gene (ptsN) in the rpoN operon and does not affect classical nitrogen regulation. Neither alter expression of era indicating that suppression is post-translational. Plasmid clones of ptsN prevent suppression by either disruption mutation indicating that this gene is important for lethality caused by erats. rpoN and six neighboring genes were sequenced and compared with sequences in the database. Two of these genes encode proteins homologous to Enzyme IIAFru and HPr of the phosphoenolpyruvate:sugar phosphotransferase system. We designate these proteins IIANtr (ptsN) and NPr (npr). Purified IIANtr and NPr exchange phosphate appropriately with Enzyme I, HPr, and Enzyme IIA proteins of the phosphoenolpyruvate: sugar phosphotransferase system. Several sugars and tricarboxylic acid cycle intermediates inhibited growth of the ptsN disruption mutant on medium containing an amino acid or nucleoside base as a combined source of nitrogen, carbon, and energy. This growth inhibition was relieved by supplying the ptsN gene or ammonium salts but was not aleviated by altering levels of exogenously supplied cAMP. These results support our previous proposal of a novel mechanism linking carbon and nitrogen assimilation and relates IIANtr to the unknown process regulated by the essential GTPase Era.


Subject(s)
DNA-Binding Proteins , DNA-Directed RNA Polymerases , Escherichia coli/genetics , Genes, Lethal , Nitrogen/metabolism , Operon , Phosphoenolpyruvate Sugar Phosphotransferase System/genetics , Sigma Factor/genetics , Amino Acid Sequence , Base Sequence , Cloning, Molecular , Escherichia coli/growth & development , Escherichia coli/metabolism , Escherichia coli Proteins , Genes, Suppressor , Genetic Complementation Test , Molecular Sequence Data , Mutation , Open Reading Frames , Phosphoenolpyruvate Sugar Phosphotransferase System/metabolism , Phylogeny , RNA Polymerase Sigma 54 , Transcription, Genetic
13.
Mol Microbiol ; 14(2): 291-300, 1994 Oct.
Article in English | MEDLINE | ID: mdl-7830573

ABSTRACT

A 3.2 kb EcoRI genomic DNA fragment of Coxiella burnetii was isolated by virtue of its ability to suppress mucoidy in Escherichia coli. Nucleotide sequence analysis revealed the presence of the genes homologous to rnc, era and recO of E. coli. Suppression of capsule synthesis, measured by beta-galactosidase expression in lon- cps-lac fusion strains of E. coli, is caused by gene-dosage effects of the plasmid-borne rnc genes of either C. burnetii or E. coli. The rnc gene of C. burnetii complemented rnc- E. coli hosts for lambda plaque morphology and stimulation of lambda N gene expression. We also demonstrated heterologous complementation of an E. coli strain defective for the expression of Era, an essential protein in E. coli, using the plasmid-borne C. burnetii era. Under the control of the bacteriophage lambda PL promoter, this 3.2 kb EcoRI DNA fragment directed the synthesis in E. coli of three proteins with approximate molecular masses of 35, 27 and 25 kDa. Antibodies against purified E. coli Era protein cross-reacted with the 35 kDa protein of C. burnetii on Western blots.


Subject(s)
Bacterial Proteins/genetics , Coxiella burnetii/genetics , Escherichia coli Proteins , GTP Phosphohydrolases/genetics , GTP-Binding Proteins/genetics , Operon , RNA-Binding Proteins , Amino Acid Sequence , Bacterial Capsules/biosynthesis , Bacteriophage lambda/growth & development , Coxiella burnetii/metabolism , Endoribonucleases/genetics , Escherichia coli/genetics , Escherichia coli/metabolism , Genetic Complementation Test , Genetic Markers , Molecular Sequence Data , Plasmids , Ribonuclease III , Viral Plaque Assay , Viral Regulatory and Accessory Proteins/biosynthesis
14.
Mol Microbiol ; 4(12): 2159-66, 1990 Dec.
Article in English | MEDLINE | ID: mdl-2089226

ABSTRACT

The positive regulatory protein VirG from the virulence region of the Ti plasmid of Agrobacterium tumefaciens was first demonstrated to possess DNA-binding capabilities using chromatographically purified protein and in vitro assays (Powell et al., 1989). This paper is an extension of that research and presents evidence on the in vivo DNA-binding properties of VirG using a transcription interference assay. VirG protein bound specifically to a 'vir box' response element and repressed transcription of a lacZ reporter gene, but increased transcription in the absence of a vir box. A biphasic response in specific DNA-binding was observed upon increasing virG expression, suggesting that specific binding was co-operatively affected by protein concentration. Certain TrpE'-'VirG hybrid proteins also bound the vir box, but required sequences distal to amino acid Arg-118 of the VirG polypeptide. These data further localize a DNA-binding domain within VirG, and support a modified model for the regulation of virulence genes in which transphosphorylation by the coregulator VirA functions to stabilize specific DNA-binding by low concentrations of VirG, resulting in gene activation. Otherwise, at high concentrations, VirG promotes expression of the virulence regulon without assistance from VirA as was shown previously (Rogowsky et al., 1987).


Subject(s)
Bacterial Proteins/metabolism , DNA, Bacterial/metabolism , DNA-Binding Proteins/metabolism , Rhizobium/metabolism , Transcription Factors , Amino Acid Sequence , Base Sequence , Chromatography , Gene Expression , Genes, Bacterial , Molecular Sequence Data , Phosphorylation , Plasmids/genetics , Promoter Regions, Genetic , Repressor Proteins/metabolism , Restriction Mapping , Rhizobium/genetics , Rhizobium/pathogenicity , Transcription, Genetic , Virulence/genetics
15.
Plasmid ; 23(2): 85-106, 1990 Mar.
Article in English | MEDLINE | ID: mdl-2194232

ABSTRACT

The entire vir regulon of Agrobacterium tumefaciens was subcloned and the complete 28.6-kbp nucleotide sequence was determined. The regulon was cloned as a single unit into two replicons, one of which replicates at a high copy number in this bacterium, and a second which has broad-host-range features to replicate in other Gram-negative bacteria. These vir region plasmids are able to confer in trans the processing and transfer activities on a second plasmid containing the T-DNA. In the high copy number vir region plasmid pUCD2614, a moderate increase in basal vir gene expression was observed as judged by virE::cat fusion expression assays relative to the wild-type control plasmid. Furthermore, higher efficiencies of tobacco leaf disk transformation were observed than with the widely used vir helper plasmid pAL4404. The nucleotide sequence studies showed that the vir region consists of 28,631 bp comprising 24 open reading frames which encode proteins involved in tumorigenicity. Two open reading frames not previously characterized, virH and ORF5, were uncovered within the virD/virE intervening spacer region. Together these studies more completely characterize the structure and function of the vir regulon.


Subject(s)
Genes, Bacterial , Genes, Regulator , Operon , Plasmids , Rhizobium/genetics , Base Sequence , Cloning, Molecular/methods , DNA, Bacterial/genetics , DNA, Bacterial/isolation & purification , Escherichia coli/genetics , Escherichia coli/growth & development , Molecular Sequence Data , Restriction Mapping , Rhizobium/growth & development , Rhizobium/pathogenicity , Virulence
16.
C R Acad Sci III ; 310(2): 21-6, 1990.
Article in French | MEDLINE | ID: mdl-2105145

ABSTRACT

High-level expression of chimeric virA genes were obtained by replacing the first codons of virA with the first codons of trpE. The fusion proteins encoded by these constructs were partially purified and one of them exhibited autokinase activity. Therefore, protein phosphorylation may be an important feature of VirA function. This allowed us to define the existence of three functional domains inside VirA.


Subject(s)
Bacterial Proteins/genetics , Protein Kinases/genetics , Rhizobium/genetics , Virulence Factors , Electrophoresis, Polyacrylamide Gel , Escherichia coli/enzymology , Escherichia coli/genetics , Genetics, Microbial , In Vitro Techniques , Plasmids/genetics , Rhizobium/enzymology
17.
Mol Microbiol ; 3(9): 1237-46, 1989 Sep.
Article in English | MEDLINE | ID: mdl-2796735

ABSTRACT

We have determined the complete nucleotide sequence of a 4.8 kilobase fragment encompassing the virA locus of the nopaline-type plasmid, pTiC58, of Agrobacterium tumefaciens. virA is composed of a single open reading frame of 2499 nucleotides, capable of encoding a protein of 91.3 kiloDaltons. A trpE::virA gene fusion was used to confirm the reading frame of virA. High nucleotide and amino acid sequence homologies were observed between pTiC58 virA and the virA sequences of three octopine-type plasmids. Strong homologies in amino acid sequence were observed between pTiC58 VirA and seven bacterial proteins which control various regulons. Two hydrophobic domains within VirA are also consistent with a model in which VirA acts as a membrane-bound sensor of plant signal molecules.


Subject(s)
Rhizobium/genetics , Amino Acid Sequence , Arginine/genetics , Bacterial Proteins/genetics , Base Sequence , Molecular Sequence Data , Plasmids/genetics , Promoter Regions, Genetic/genetics , Restriction Mapping , Rhizobium/pathogenicity , Sequence Homology, Nucleic Acid , Virulence/genetics
18.
Mol Microbiol ; 3(3): 411-9, 1989 Mar.
Article in English | MEDLINE | ID: mdl-2664419

ABSTRACT

Virulence genes of the Agrobacterium tumefaciens Ti plasmid are positively regulated by the products of virA and virG. To study the DNA-binding properties of the VirG protein, a translational fusion between virG and the trpE gene of Escherichia coli was constructed, and antiserum was raised against the encoded fusion protein. Using this antiserum, a protein of Mr congruent to 29,000, a size similar to that calculated from the virG nucleotide sequence, was detected in an E. coli strain harbouring a virG expression vector. Both the virG protein and the fusion protein were found, by filter-binding and gel retardation analyses, to bind DNA nonspecifically. These data support an existing model for the two-component regulatory systems of bacteria.


Subject(s)
DNA-Binding Proteins/genetics , Genes, Bacterial , Genes, Regulator , Plasmids , Rhizobium/genetics , Antibodies, Bacterial/immunology , Cloning, Molecular , DNA, Bacterial/genetics , DNA, Bacterial/metabolism , DNA-Binding Proteins/isolation & purification , DNA-Binding Proteins/metabolism , Electrophoresis/methods , Escherichia coli/genetics , Models, Biological , Recombinant Proteins/biosynthesis , Recombinant Proteins/genetics , Recombinant Proteins/immunology , Restriction Mapping , Rhizobium/pathogenicity , Tryptophan/genetics , Virulence
19.
Mol Microbiol ; 1(3): 309-16, 1987 Nov.
Article in English | MEDLINE | ID: mdl-3448462

ABSTRACT

The nucleotide sequence of the virG locus of the nopaline type plasmid pTiC58 of Agrobacterium tumefaciens has been determined. It contains an open reading frame (ORF) of 759 nucleotides and has 77% homology to the virG sequences of octopine type plasmids. Differences between the sequences of the two types of Ti plasmids in the region of virG are located predominantly outside the ORF. The amino acid sequences inferred from the two virG genes show 80% homology to each other and each shows the same moderate homologies to amino acid sequences derived from genes in a family of two-component regulatory systems. Specific differences in nucleotide and amino acid sequences as well as a structure-function model for the gene product are discussed.


Subject(s)
Genes, Bacterial , Genes, Regulator , Plasmids , Rhizobium/genetics , Amino Acid Sequence , Base Sequence , Cloning, Molecular , Molecular Sequence Data
20.
Gene ; 43(1-2): 131-8, 1986.
Article in English | MEDLINE | ID: mdl-3530879

ABSTRACT

The synthetic C5a gene was initially found to be expressed poorly in Escherichia coli. We undertook studies to determine the reasons for poor expression and to increase expression. The work was focused on the role of the mRNA structure in C5a expression and stability of its product in E. coli. We present data on the effects of varying the sequence at the 5' end of mRNA as well as different ribosome-binding sites on expression. Evaluation of the stability of C5a showed rapid degradation of C5a in wild-type E. coli (half-life 3-5 min). Screening of several protease-deficient strains of E. coli showed that C5a was much more stable in an htpR strain carrying a mutation in the sigma subunit of RNA polymerase that is specific for heat shock promoters. The mutation is associated with a proteolytic deficiency. The half-life of C5a was increased to 20 min. By manipulating the expression vector, the regulatory region for the C5a gene, the host strain, growth conditions and methods for recovering the protein, C5a levels were increased 300-fold over previously reported amounts to about 3% of total cellular protein.


Subject(s)
Cloning, Molecular , Complement C5/genetics , Genes , Base Sequence , Complement C5/metabolism , Complement C5a , DNA, Recombinant/metabolism , Escherichia coli/genetics , Genetic Vectors , Genotype , Humans , Kinetics , Plasmids , Ribosomes/metabolism , Species Specificity , Transcription, Genetic
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