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1.
Inorg Chem ; 63(24): 10954-10966, 2024 Jun 17.
Article in English | MEDLINE | ID: mdl-38845415

ABSTRACT

The structural chemistry of boron goes beyond the sp, sp2, and sp3 hybridization paradigms of carbon chemistry. We relate the apparently unconnected polyhedral boranes and 3D allotropes on the one hand and 2D clusters, borophenes, and multilayer borophenes on the other hand, through an extended Rudolph diagram. All-boron equivalents of cyclopropenium cation viz the flat B3H5 and the nonplanar B3H6+ constitute the missing links. The nonplanar B3H6+ (C3v) is the starting point for construction of polyhedral boranes; e.g., fusion of two of them leads to octahedral B6H62-. On the other hand, planar B3H6+ and B3H5 relate to borophenes with hexagonal holes. These borophene sheets can be further stacked with diverse interlayer BB bonds, ranging from bilayers to infinite layers. The tendency to achieve electron sufficiency as in the parent C3H3+ dictates the preference for hexagonal holes in the constituent layers and the interlayer bonds between them in multilayer borophenes. The design principles and theoretical validations for the formation of multilayer borophenes are also presented, indicating the variety and complexities involved.

2.
Analyst ; 148(10): 2362-2374, 2023 May 16.
Article in English | MEDLINE | ID: mdl-37128863

ABSTRACT

Natural and anthropogenic activities leading to excessive toxic biological anions in water have warranted the development of anion sensors, especially for cyanide (CN-) and fluoride (F-) ions in aqueous media. Herein, a contemporary synthetic route to embed organochalcogen compounds (-SPh and -SePh) in a boron-functionalized imidazole scaffold via metal halogen exchange is reported. Upon methylation, fluorogenic compounds 5-dimesitylboryl-2-phenylthio-1-methylimidazole (7) and 5-dimesitylboryl-2-phenylselone-1-methylimidazole (8) form the corresponding imidazolium salts, 5-dimesitylboryl-2-phenylthio-1-methylimidazolium iodide (9) and 5-dimesitylboryl-2-phenylselone-1-methylimidazolium iodide (10), which are non-luminescent. All of the compounds are thoroughly characterized, and their utility in sensing F-, CN-, and various other biologically relevant halides has been studied through UV-vis and fluorescence spectroscopy. The substrates and products of 1 : 1 binding of anions (F-/CN-) with the compounds have been established by spectroscopy, spectrometry, single-crystal X-ray crystallography, and first principles quantum mechanical theoretical calculations. The superior binding ability and micromolar sensitivity towards CN- ions over other anions in aqueous media were elucidated. The reversibility of compound 7 was also tested and it was found that fluoride binding was reversible while cyanide binding was not.

3.
Inorg Chem ; 61(9): 3811-3815, 2022 Mar 07.
Article in English | MEDLINE | ID: mdl-35192343

ABSTRACT

The deprotonation of acyclic palladium amidine chloride (1) with potassium tert-butoxide in tetrahydrofuran results in palladium bis(formamidinate) (2). 2 undergoes a nucleophilic addition reaction with acetonitrile in the presence of PdCl2 or Pd(OAc)2 (OAc = acetate) to give dinuclear cyclic six-membered (triazapentadiene)palladium complexes (4a and 4b). These compounds are also prepared from cyclic six-membered (tap)PdCl2 (5; tap = triazapentadiene) or formamidinium salts (6a-6c) with Pd(OAc)2/NaOAc in acetonitrile, whereas the direct reaction of 2 with acetonitrile or acrylonitrile resulted in palladium black or an acyclic C-N-coupled product (3). A comparison of structure 4 from 2 suggests a possible intermediate dinuclear palladium complex whose structure was identified through theoretical calculations. Further, Suzuki-Miyaura cross-coupling reactions were carried out under different solvents notably in an ethanol/water medium at room temperature.

4.
J Am Chem Soc ; 136(9): 3410-23, 2014 Mar 05.
Article in English | MEDLINE | ID: mdl-24495133

ABSTRACT

The absence of a crystalline SiO phase under ordinary conditions is an anomaly in the sequence of group 14 monoxides. We explore theoretically ordered ground-state and amorphous structures for SiO at P = 1 atm, and crystalline phases also at pressures up to 200 GPa. Several competitive ground-state P = 1 atm structures are found, perforce with Si-Si bonds, and possessing Si-O-Si bridges similar to those in silica (SiO2) polymorphs. The most stable of these static structures is enthalpically just a little more stable than a calculated random bond model of amorphous SiO. In that model we find no segregation into regions of amorphous Si and amorphous SiO2. The P = 1 atm structures are all semiconducting. As the pressure is increased, intriguing new crystalline structures evolve, incorporating Si triangular nets or strips and stishovite-like regions. A heat of formation of crystalline SiO is computed; it is found to be the most negative of all the group 14 monoxides. Yet, given the stability of SiO2, the disproportionation 2SiO(s) → Si(s)+SiO2(s) is exothermic, falling right into the series of group 14 monoxides, and ranging from a highly negative ΔH of disproportionation for CO to highly positive for PbO. There is no major change in the heat of disproportionation with pressure, i.e., no range of stability of SiO with respect to SiO2. The high-pressure SiO phases are metallic.

5.
J Chem Theory Comput ; 9(8): 3855-9, 2013 Aug 13.
Article in English | MEDLINE | ID: mdl-26584131

ABSTRACT

Theoretical calculations are presented on a new hypothetical 3,4-connected carbon net (called squaroglitter) incorporating 1,4 cyclohexadiene units. The structure has tetragonal space group P4/mmm (No. 123) symmetry. The optimized geometry shows normal distances, except for some elongated bonds in the cyclobutane ring substructures in the network. Squaroglitter has an indirect bandgap of about 1.0 eV. The hypothetical lattice, whose density is close to graphite, is more stable than other 3,4-connected carbon nets. A relationship to a (4,4)nanotube is explored, as is a potential threading of the lattice with metal needles.

6.
J Am Chem Soc ; 134(48): 19884-94, 2012 Dec 05.
Article in English | MEDLINE | ID: mdl-23151038

ABSTRACT

The chemical bonding schemes of thallium cluster anions commonly comply with neither Wade-Mingos's rules nor the Zintl-Klemm concept and thus far have escaped a fully consistent description. In general, the number of electrons available for the cluster skeleton bonding fall below those required according to the qualitative concepts mentioned and the clusters were labeled "hypoelectronic". Based on fully relativistic band structure calculations on respective complete extended solids and electronic structure calculations on excised, charge compensated, and geometrically optimized clusters, we have identified two mechanisms that are suited to lift the degeneracy of partially filled electronic states and to open a HOMO-LUMO gap, the Jahn-Teller effect and relativistic spin-orbit coupling. Treatment on this level of theory shows that, in accordance with experiment, the thallium cluster anions known are electronically saturated and not deficient in valence electrons. We provide qualitative group theoretical procedures for analyzing the Jahn-Teller effect and spin-orbit coupling in lifting the degeneracy of frontier orbitals in highly symmetric thallium cluster anions.

7.
J Phys Chem A ; 116(40): 10027-36, 2012 Oct 11.
Article in English | MEDLINE | ID: mdl-22978817

ABSTRACT

Static high pressure lithium amide (LiNH(2)) crystal structures are predicted using evolutionary structure search methodologies and intuitive approaches. In the process, we explore the relationship of the structure and properties of solid LiNH(2) to its molecular monomer and dimer, as well as its valence-isoelectronic crystalline phases of methane, water, and ammonia all under pressure. A NaNH(2) (Fddd) structure type is found to be competitive for the ground state of LiNH(2) above 6 GPa with the P = 1 atm I4[overline] phase. Three novel phases emerge at 11 (P4[overline]2(1)m), 13 (P4(2)/ncm), and 46 GPa (P2(1)2(1)2(1)), still containing molecular amide anions, which begin to form N-H···N hydrogen bonds. The P2(1)2(1)2(1) phase remains stable over a wide pressure range. This phase and another Pmc2(1) structure found at 280 GPa have infinite ···(H)N···H···N(H)···H polymeric zigzag chains comprising symmetric N···H···N hydrogen bonds with one NH bond kept out of the chain, an interesting general feature found in many of our high pressure (>280 GPa) LiNH(2) structures, with analogies in high pressure H(2)O-ices. All the predicted low enthalpy LiNH(2) phases are calculated to be enthalpically stable with respect to their elements but resist metallization with increasing pressure up to several TPa. The possibility of Li sublattice melting in the intermediate pressure range structures is raised.


Subject(s)
Amides/chemistry , Lithium/chemistry , Hydrogen Bonding , Molecular Structure , Polymers/chemistry , Pressure
8.
Phys Rev Lett ; 100(16): 165504, 2008 Apr 25.
Article in English | MEDLINE | ID: mdl-18518216

ABSTRACT

First-principles electronic structure calculations show that boron clusters B98, B99, B100, B101, and B102 based on icosahedral-B12 stuffed fullerenes are more stable than the fullerenelike boron clusters. These more stable structures are envisaged as an icosahedral B12 each vertex of which is connected to the apex of a pentagonal pyramid (B6) via radial 2c-2e sigma bonds. The resulting B84 (B(12)@B(12)@B(60)) retains the same symmetry as C60, and the B(n) (n=84-116) clusters are generated around it. We further project the possibility of producing such B12 based giant clusters.

9.
J Comput Chem ; 28(1): 310-9, 2007 Jan 15.
Article in English | MEDLINE | ID: mdl-17103397

ABSTRACT

DFT and hybrid HF-DFT studies of structure and bonding of CpMP6MCp triple-decker sandwich complexes, ranging from 18-28 valence electrons (VE) with M=Sc, Y, Ti, Zr, Hf, V, Nb, Ta, Cr, Mo, and W, show that the middle P6 ring complexes adopt symmetric planar (28 valence electron count [VEC]), asymmetric planar (26 VEC), and puckered (24 VEC) geometries. According to the mno Rule, 50 skeletal electrons are needed for these triple-decker cluster frameworks. For 28 VEC, this corresponds to 10 electrons more than the 50 electrons of the mno Rule if all VE of the metal are included. These additional electrons control the distortion of a P6 middle ring and other finer structural details. Completely filled 2a* and 2b* orbitals in 28 VE complexes lead to a planar symmetrical P6 middle ring, while the occupancy in either 2a* or 2b* alone explains the in-plane distortions (asymmetric) in 26 VE complexes. In comparison with 28 VE complexes, the puckering of P6 middle ring in 24 VE complexes is due to the greater stabilization of 5a and the extra stabilization of the +4 oxidation state of Ti. The quintet state of 22 VE complexes is planar as 2a* and 2b* are half filled. Similar geometrical and bonding patterns of CpScP6ScCp and C2P3H2ScC3P3H3ScC2P3H2 support the carbon-phosphorus analogy further. The 18 VE systems, CpScC3B3H6ScCp+ and CpScP3B3H3ScCp+, have the 50 skeletal electrons as stipulated by the mno Rule. Corresponding anions have 52 skeletal electrons (20 VE); the middle rings here are distorted in the plane.

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