Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 36
Filter
Add more filters










Publication year range
1.
Am J Bot ; 103(6): 1006-19, 2016 06.
Article in English | MEDLINE | ID: mdl-27335390

ABSTRACT

PREMISE OF THE STUDY: Most pollen walls are interrupted by apertures, thin areas providing access to stigmatic fluids and exit points for pollen tubes. Unexpectedly, pollen tubes of Arabidopsis thaliana are not obligated to pass through apertures and can instead take the shortest route into the stigma, passing directly through a nonaperturate wall. METHODS: We used stains and confocal microscopy to follow early pollen tube formation in A. thaliana and 200+ other species. We germinated pollen in vitro and in situ (at control and high humidities) and also used atomic force microscopy to assay material properties of nonaperture and aperture walls. KEY RESULTS: Pollen tubes of A. thaliana breached nonaperture walls despite these being an order of magnitude stiffer than aperture walls. Breakout was associated with localized swelling of the pectin-rich (alcian blue positive) intine. The precision of pollen tube exit at the pollen-stigma interface was lost at high humidity. Pollen from ∼4% of the species surveyed exhibited breakout germination behavior; all nine breakout species identified so far are in the Brassicaceae family (∼25% of the Brassicaceae sampled) and are scattered across seven tribes. CONCLUSIONS: The polarity of pollen germination in A. thaliana is externally induced, not linked to aperture location. The biomechanical force for breaking nonaperture walls is found in localized swelling of intine pectins. As such, the pollen from A. thaliana, and likely many Brassicaceae family members, are functionally omniaperturate. This new mechanism for germination between extant apertures raises questions about exine porosity and the diversity of mechanisms across taxa.


Subject(s)
Arabidopsis/physiology , Brassicaceae/physiology , Cell Wall/physiology , Pollen/physiology , Germination , Humidity , Microscopy, Atomic Force , Pectins/metabolism , Phylogeny , Pollen Tube/physiology , Seeds/physiology
2.
PLoS One ; 8(2): e57566, 2013.
Article in English | MEDLINE | ID: mdl-23469025

ABSTRACT

BACKGROUND/AIM: Pollen grains are the male gametophytes that deliver sperm cells to female gametophytes during sexual reproduction of higher plants. Pollen is a major source of aeroallergens and environmental antigens. The pollen coat harbors a plethora of lipids that are required for pollen hydration, germination, and penetration of the stigma by pollen tubes. In addition to proteins, pollen displays a wide array of lipids that interact with the human immune system. Prior searches for pollen allergens have focused on the identification of intracellular allergenic proteins, but have largely overlooked much of the extracellular pollen matrix, a region where the majority of lipid molecules reside. Lipid antigens have attracted attention for their potent immunoregulatory effects. By being in close proximity to allergenic proteins on the pollen surface when they interact with host cells, lipids could modify the antigenic properties of proteins. METHODOLOGY/PRINCIPAL FINDINGS: We performed a comparative pollen lipid profiling of 22 commonly allergenic plant species by the use of gas chromatography-mass spectroscopy, followed by detailed data mining and statistical analysis. Three experiments compared pollen lipid profiles. We built a database library of the pollen lipids by matching acquired pollen-lipid mass spectra and retention times with the NIST/EPA/NIH mass-spectral library. We detected, identified, and relatively quantified more than 106 lipid molecular species including fatty acids, n-alkanes, fatty alcohols, and sterols. Pollen-derived lipids stimulation up-regulate cytokines expression of dendritic and natural killer T cells co-culture. CONCLUSIONS/SIGNIFICANCE: Here we report on a lipidomic analysis of pollen lipids that can serve as a database for identifying potential lipid antigens and/or novel candidate molecules involved in allergy. The database provides a resource that facilitates studies on the role of lipids in the immunopathogenesis of allergy. Pollen lipids vary greatly among allergenic species and contain many molecules that have stimulatory or regulatory effects on immune responses.


Subject(s)
Allergens/metabolism , Biomarkers , Hypersensitivity/immunology , Lipid Metabolism , Pollen/metabolism , Allergens/immunology , Flow Cytometry , Gas Chromatography-Mass Spectrometry , Humans , Killer Cells, Natural/immunology , Lymphocyte Activation , Principal Component Analysis
3.
PLoS One ; 8(1): e53337, 2013.
Article in English | MEDLINE | ID: mdl-23308195

ABSTRACT

BACKGROUND: The pollen coat is the first structure of the pollen to encounter the mucosal immune system upon inhalation. Prior characterizations of pollen allergens have focused on water-soluble, cytoplasmic proteins, but have overlooked much of the extracellular pollen coat. Due to washing with organic solvents when prepared, these pollen coat proteins are typically absent from commercial standardized allergenic extracts (i.e., "de-fatted"), and, as a result, their involvement in allergy has not been explored. METHODOLOGY/PRINCIPAL FINDINGS: Using a unique approach to search for pollen allergenic proteins residing in the pollen coat, we employed transmission electron microscopy (TEM) to assess the impact of organic solvents on the structural integrity of the pollen coat. TEM results indicated that de-fatting of Cynodon dactylon (Bermuda grass) pollen (BGP) by use of organic solvents altered the structural integrity of the pollen coat. The novel IgE-binding proteins of the BGP coat include a cysteine protease (CP) and endoxylanase (EXY). The full-length cDNA that encodes the novel IgE-reactive CP was cloned from floral RNA. The EXY and CP were purified to homogeneity and tested for IgE reactivity. The CP from the BGP coat increased the permeability of human airway epithelial cells, caused a clear concentration-dependent detachment of cells, and damaged their barrier integrity. CONCLUSIONS/SIGNIFICANCE: Using an immunoproteomics approach, novel allergenic proteins of the BGP coat were identified. These proteins represent a class of novel dual-function proteins residing on the coat of the pollen grain that have IgE-binding capacity and proteolytic activity, which disrupts the integrity of the airway epithelial barrier. The identification of pollen coat allergens might explain the IgE-negative response to available skin-prick-testing proteins in patients who have positive symptoms. Further study of the role of these pollen coat proteins in allergic responses is warranted and could potentially lead to the development of improved diagnostic and therapeutic tools.


Subject(s)
Cynodon/chemistry , Cysteine Proteases/pharmacology , Endo-1,4-beta Xylanases/pharmacology , Epithelial Cells/drug effects , Immunoglobulin E/metabolism , Plant Proteins/pharmacology , Pollen/chemistry , Respiratory Mucosa/drug effects , Base Sequence , Cell Adhesion/drug effects , Cell Membrane Permeability/drug effects , Cells, Cultured , Chemical Fractionation , Cynodon/immunology , Cynodon/ultrastructure , Cysteine Proteases/isolation & purification , Cysteine Proteases/metabolism , Dose-Response Relationship, Drug , Endo-1,4-beta Xylanases/isolation & purification , Endo-1,4-beta Xylanases/metabolism , Epithelial Cells/cytology , Epithelial Cells/metabolism , Humans , Immunoglobulin E/chemistry , Immunoglobulin E/immunology , Microscopy, Electron, Transmission , Molecular Sequence Data , Plant Proteins/isolation & purification , Plant Proteins/metabolism , Pollen/immunology , Pollen/ultrastructure , Protein Binding , Respiratory Mucosa/cytology , Respiratory Mucosa/metabolism , Rhinitis, Allergic, Seasonal/immunology , Solvents
4.
Plant Physiol ; 157(2): 947-70, 2011 Oct.
Article in English | MEDLINE | ID: mdl-21849515

ABSTRACT

Exine, the outer plant pollen wall, has elaborate species-specific patterns, provides a protective barrier for male gametophytes, and serves as a mediator of strong and species-specific pollen-stigma adhesion. Exine is made of sporopollenin, a material remarkable for its strength, elasticity, and chemical durability. The chemical nature of sporopollenin, as well as the developmental mechanisms that govern its assembly into diverse patterns in different species, are poorly understood. Here, we describe a simple yet effective genetic screen in Arabidopsis (Arabidopsis thaliana) that was undertaken to advance our understanding of sporopollenin synthesis and exine assembly. This screen led to the recovery of mutants with a variety of defects in exine structure, including multiple mutants with novel phenotypes. Fifty-six mutants were selected for further characterization and are reported here. In 14 cases, we have mapped defects to specific genes, including four with previously demonstrated or suggested roles in exine development (MALE STERILITY2, CYP703A2, ANTHER-SPECIFIC PROTEIN6, TETRAKETIDE α-PYRONE REDUCTASE/DIHYDROFLAVONOL-4-REDUCTASE-LIKE1), and a number of genes that have not been implicated in exine production prior to this screen (among them, fatty acid ω-hydroxylase CYP704B1, putative glycosyl transferases At1g27600 and At1g33430, 4-coumarate-coenzyme A ligase 4CL3, polygalacturonase QUARTET3, novel gene At5g58100, and nucleotide-sugar transporter At5g65000). Our study illustrates that morphological screens of pollen can be extremely fruitful in identifying previously unknown exine genes and lays the foundation for biochemical, developmental, and evolutionary studies of exine production.


Subject(s)
Arabidopsis Proteins/genetics , Arabidopsis/growth & development , Arabidopsis/genetics , Biopolymers/metabolism , Carotenoids/metabolism , Pollen/physiology , Arabidopsis Proteins/metabolism , Biopolymers/genetics , Carotenoids/genetics , Cytochrome P-450 Enzyme System/genetics , Gene Expression Regulation, Plant , Mutation , Phenotype
5.
PLoS One ; 6(6): e20587, 2011.
Article in English | MEDLINE | ID: mdl-21673996

ABSTRACT

DNA methylation is important for controlling gene expression in all eukaryotes. Microarray analysis of mutant and chemically-treated Arabidopsis thaliana seedlings with reduced DNA methylation revealed an altered gene expression profile after treatment with the DNA methylation inhibitor 5-aza-2' deoxycytidine (5-AC), which included the upregulation of expression of many transposable elements. DNA damage-response genes were also coordinately upregulated by 5-AC treatment. In the ddm1 mutant, more specific changes in gene expression were observed, in particular for genes predicted to encode transposable elements in centromeric and pericentromeric locations. These results confirm that DDM1 has a very specific role in maintaining transcriptional silence of transposable elements, while chemical inhibitors of DNA methylation can affect gene expression at a global level.


Subject(s)
Arabidopsis/drug effects , Arabidopsis/genetics , Chromatin/drug effects , Chromatin/genetics , Gene Expression Profiling , Arabidopsis/cytology , Arabidopsis/metabolism , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Azacitidine/analogs & derivatives , Azacitidine/pharmacology , Chromatin/metabolism , DNA Damage/genetics , DNA Methylation/drug effects , DNA Methylation/genetics , DNA Transposable Elements/genetics , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Decitabine , Mutation , Oligonucleotide Array Sequence Analysis , Seedlings/cytology , Seedlings/drug effects , Seedlings/genetics , Seedlings/metabolism , Substrate Specificity , Transcription Factors/genetics , Transcription Factors/metabolism , Transcription, Genetic/drug effects , Transcription, Genetic/genetics , Up-Regulation/drug effects , Up-Regulation/genetics
6.
Plant Cell Physiol ; 52(5): 894-908, 2011 May.
Article in English | MEDLINE | ID: mdl-21471118

ABSTRACT

GABA (γ-aminobutyric acid), a non-protein amino acid, is a signaling factor in many organisms. In plants, GABA is known to accumulate under a variety of stresses. However, the consequence of GABA accumulation, especially in vegetative tissues, remains poorly understood. Moreover, gene expression changes as a consequence of GABA accumulation in plants are largely unknown. The pop2 mutant, which is defective in GABA catabolism and accumulates GABA, is a good model to examine the effects of GABA accumulation on plant development. Here, we show that the pop2 mutants have pollen tube elongation defects in the transmitting tract of pistils. Additionally, we observed growth inhibition of primary root and dark-grown hypocotyl, at least in part due to cell elongation defects, upon exposure to exogenous GABA. Microarray analysis of pop2-1 seedlings grown in GABA-supplemented medium revealed that 60% of genes whose expression decreased encode secreted proteins. Besides, functional classification of genes with decreased expression in the pop2-1 mutant showed that cell wall-related genes were significantly enriched in the microarray data set, consistent with the cell elongation defects observed in pop2 mutants. Our study identifies cell elongation defects caused by GABA accumulation in both reproductive and vegetative tissues. Additionally, our results show that genes that encode secreted and cell wall-related proteins may mediate some of the effects of GABA accumulation. The potential function of GABA as a growth control factor under stressful conditions is discussed.


Subject(s)
Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Arabidopsis/cytology , Arabidopsis/genetics , Cell Wall/genetics , Gene Expression Regulation, Plant , gamma-Aminobutyric Acid/metabolism , Arabidopsis/drug effects , Arabidopsis/growth & development , Darkness , Gene Expression Profiling , Gene Expression Regulation, Plant/drug effects , Genes, Plant/genetics , Hypocotyl/drug effects , Hypocotyl/growth & development , Hypocotyl/metabolism , Mutation/genetics , Oligonucleotide Array Sequence Analysis , Phenotype , Plant Leaves/drug effects , Plant Leaves/growth & development , Plant Leaves/metabolism , Plant Roots/drug effects , Plant Roots/growth & development , Plant Roots/metabolism , Plant Shoots/drug effects , Plant Shoots/metabolism , Pollen Tube/drug effects , Pollen Tube/growth & development , Pollen Tube/metabolism , Seedlings/drug effects , Seedlings/growth & development , Seedlings/metabolism , Spectroscopy, Fourier Transform Infrared , gamma-Aminobutyric Acid/pharmacology
8.
Plant Physiol ; 153(3): 937-55, 2010 Jul.
Article in English | MEDLINE | ID: mdl-20442277

ABSTRACT

Pollen grains of land plants have evolved remarkably strong outer walls referred to as exine that protect pollen and interact with female stigma cells. Exine is composed of sporopollenin, and while the composition and synthesis of this biopolymer are not well understood, both fatty acids and phenolics are likely components. Here, we describe mutations in the Arabidopsis (Arabidopsis thaliana) LESS ADHESIVE POLLEN (LAP5) and LAP6 that affect exine development. Mutation of either gene results in abnormal exine patterning, whereas pollen of double mutants lacked exine deposition and subsequently collapsed, causing male sterility. LAP5 and LAP6 encode anther-specific proteins with homology to chalcone synthase, a key flavonoid biosynthesis enzyme. lap5 and lap6 mutations reduced the accumulation of flavonoid precursors and flavonoids in developing anthers, suggesting a role in the synthesis of phenolic constituents of sporopollenin. Our in vitro functional analysis of LAP5 and LAP6 using 4-coumaroyl-coenzyme A yielded bis-noryangonin (a commonly reported derailment product of chalcone synthase), while similar in vitro analyses using fatty acyl-coenzyme A as the substrate yielded medium-chain alkyl pyrones. Thus, in vitro assays indicate that LAP5 and LAP6 are multifunctional enzymes and may play a role in both the synthesis of pollen fatty acids and phenolics found in exine. Finally, the genetic interaction between LAP5 and an anther gene involved in fatty acid hydroxylation (CYP703A2) demonstrated that they act synergistically in exine production.


Subject(s)
Acyltransferases/chemistry , Arabidopsis Proteins/metabolism , Arabidopsis/enzymology , Arabidopsis/growth & development , Pollen/growth & development , Polyketide Synthases/metabolism , Sequence Homology, Amino Acid , Amino Acid Sequence , Arabidopsis/genetics , Arabidopsis Proteins/chemistry , Arabidopsis Proteins/genetics , Body Patterning/genetics , Chalcone/chemistry , Chromatography, High Pressure Liquid , Chromosome Mapping , Fatty Acids/metabolism , Flavanones/biosynthesis , Flavanones/chemistry , Gene Expression Regulation, Plant , Genetic Complementation Test , Hydroxylation , Mass Spectrometry , Molecular Sequence Data , Multigene Family , Mutation/genetics , Organ Specificity/genetics , Pollen/cytology , Pollen/enzymology , Pollen/genetics , Polyketide Synthases/chemistry , Polyketide Synthases/genetics , Substrate Specificity
9.
PLoS One ; 5(4): e10174, 2010 Apr 16.
Article in English | MEDLINE | ID: mdl-20419087

ABSTRACT

BACKGROUND: Current diagnostics for allergies, such as skin prick and radioallergosorbent tests, do not allow for inexpensive, high-throughput screening of patients. Additionally, extracts used in these methods are made from washed pollen that lacks pollen surface materials that may contain allergens. METHODOLOGY/PRINCIPAL FINDINGS: We sought to develop a high-throughput assay to rapidly measure allergen-specific IgE in sera and to explore the relative allergenicity of different pollen fractions (i.e. surface, cytoplasmic, commercial extracts). To do this, we generated a protein microarray containing surface, cytoplasmic, and commercial extracts from 22 pollen species, commercial extracts from nine non-pollen allergens, and five recombinant allergenic proteins. Pollen surface and cytoplasmic fractions were prepared by extraction into organic solvents and aqueous buffers, respectively. Arrays were incubated with <25 uL of serum from 176 individuals and bound IgE was detected by indirect immunofluorescence, providing a high-throughput measurement of IgE. We demonstrated that the allergen microarray is a reproducible method to measure allergen-specific IgE in small amounts of sera. Using this tool, we demonstrated that specific IgE clusters according to the phylogeny of the allergen source. We also showed that the pollen surface, which has been largely overlooked in the past, contained potent allergens. Although, as a class, cytoplasmic fractions obtained by our pulverization/precipitation method were comparable to commercial extracts, many individual allergens showed significant differences. CONCLUSIONS/SIGNIFICANCE: These results support the hypothesis that protein microarray technology is a useful tool for both research and in the clinic. It could provide a more efficient and less painful alternative to traditionally used skin prick tests, making it economically feasible to compare allergen sensitivity of different populations, monitor individual responses over time, and facilitate genetic studies on pollen allergy.


Subject(s)
Allergens/immunology , Immunoglobulin E/blood , Pollen/immunology , Protein Array Analysis/methods , Rhinitis, Allergic, Seasonal/diagnosis , Cytoplasm , Humans , Immunoglobulin E/immunology , Protein Array Analysis/standards , Reproducibility of Results
10.
BMC Plant Biol ; 10: 32, 2010 Feb 22.
Article in English | MEDLINE | ID: mdl-20170550

ABSTRACT

BACKGROUND: Plant biologists have long speculated about the mechanisms that guide pollen tubes to ovules. Although there is now evidence that ovules emit a diffusible attractant, little is known about how this attractant mediates interactions between the pollen tube and the ovules. RESULTS: We employ a semi-in vitro assay, in which ovules dissected from Arabidopsis thaliana are arranged around a cut style on artificial medium, to elucidate how ovules release the attractant and how pollen tubes respond to it. Analysis of microscopy images of the semi-in vitro system shows that pollen tubes are more attracted to ovules that are incubated on the medium for longer times before pollen tubes emerge from the cut style. The responses of tubes are consistent with their sensing a gradient of an attractant at 100-150 mum, farther than previously reported. Our microscopy images also show that pollen tubes slow their growth near the micropyles of functional ovules with a spatial range that depends on ovule incubation time. CONCLUSIONS: We propose a stochastic model that captures these dynamics. In the model, a pollen tube senses a difference in the fraction of receptors bound to an attractant and changes its direction of growth in response; the attractant is continuously released from ovules and spreads isotropically on the medium. The model suggests that the observed slowing greatly enhances the ability of pollen tubes to successfully target ovules. The relation of the results to guidance in vivo is discussed.


Subject(s)
Arabidopsis/growth & development , Ovule/growth & development , Pollen Tube/growth & development , Computer Simulation , Culture Media , Image Processing, Computer-Assisted , Microscopy, Confocal , Models, Biological
11.
Sex Plant Reprod ; 22(3): 167-77, 2009 Sep.
Article in English | MEDLINE | ID: mdl-20033437

ABSTRACT

We isolated lap3-1 and lap3-2 mutants in a screen for pollen that displays abnormal stigma binding. Unlike wild-type pollen, lap3-1 and lap3-2 pollen exine is thinner, weaker, and is missing some connections between their roof-like tectum structures. We describe the mapping and identification of LAP3 as a novel gene that contains a repetitive motif found in beta-propeller enzymes. Insertion mutations in LAP3 lead to male sterility. To investigate possible roles for LAP3 in pollen development, we assayed the metabolite profile of anther tissues containing developing pollen grains and found that the lap3-2 defect leads to a broad range of metabolic changes. The largest changes were seen in levels of a straight-chain hydrocarbon nonacosane and in naringenin chalcone, an obligate compound in the flavonoid biosynthesis pathway.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/metabolism , Pollen/growth & development , Arabidopsis/genetics , Arabidopsis/growth & development , Arabidopsis Proteins/genetics , Pollen/genetics , Pollen/metabolism
12.
Sex Plant Reprod ; 22(3): 197-204, 2009 Sep.
Article in English | MEDLINE | ID: mdl-20033440

ABSTRACT

Pollination in species with dry stigmas begins with the hydration of desiccated pollen grains on the stigma, a highly regulated process involving the proteins and lipids of the pollen coat and stigma cuticle. Self-incompatible species of the Brassicaceae block pollen hydration, and while the early signaling steps of the self-incompatibility response are well studied, the precise mechanisms controlling pollen hydration are poorly understood. Both lipids and proteins are important for hydration; loss of pollen coat lipids and proteins results in defective or delayed hydration on the stigma surface. Here, we examine the role of the pollen coat protein extracellular lipase 4 (EXL4), in the initial steps of pollination, namely hydration on the stigma. We identify a mutant allele, exl4-1, that shows a reduced rate of pollen hydration. exl4-1 pollen is normal with respect to pollen morphology and the downstream steps in pollination, including pollen tube germination, growth, and fertilization of ovules. However, owing to the delay in hydration, exl4-1 pollen is at a disadvantage when competed with wild-type pollen. EXL4 also functions in combination with GRP17 to promote the initiation of hydration. EXL4 is similar to GDSL lipases, and we show that it functions in hydrolyzing ester bonds. We report a previously unknown function for EXL4, an abundant pollen coat protein, in promoting pollen hydration on the stigma. Our results indicate that changes in lipid composition at the pollen-stigma interface, possibly mediated by EXLs, are required for efficient pollination in species with dry stigmas.


Subject(s)
Arabidopsis/enzymology , Carboxylic Ester Hydrolases/metabolism , Pollen/physiology , Water/metabolism , Arabidopsis/genetics , Arabidopsis/physiology , Carboxylic Ester Hydrolases/genetics , Pollen/enzymology , Pollen/genetics , Pollination
13.
Plant Physiol ; 151(2): 574-89, 2009 Oct.
Article in English | MEDLINE | ID: mdl-19700560

ABSTRACT

Sporopollenin is the major component of the outer pollen wall (exine). Fatty acid derivatives and phenolics are thought to be its monomeric building blocks, but the precise structure, biosynthetic route, and genetics of sporopollenin are poorly understood. Based on a phenotypic mutant screen in Arabidopsis (Arabidopsis thaliana), we identified a cytochrome P450, designated CYP704B1, as being essential for exine development. CYP704B1 is expressed in the developing anthers. Mutations in CYP704B1 result in impaired pollen walls that lack a normal exine layer and exhibit a characteristic striped surface, termed zebra phenotype. Heterologous expression of CYP704B1 in yeast cells demonstrated that it catalyzes omega-hydroxylation of long-chain fatty acids, implicating these molecules in sporopollenin synthesis. Recently, an anther-specific cytochrome P450, denoted CYP703A2, that catalyzes in-chain hydroxylation of lauric acid was also shown to be involved in sporopollenin synthesis. This shows that different classes of hydroxylated fatty acids serve as essential compounds for sporopollenin formation. The genetic relationships between CYP704B1, CYP703A2, and another exine gene, MALE STERILITY2, which encodes a fatty acyl reductase, were explored. Mutations in all three genes resulted in pollen with remarkably similar zebra phenotypes, distinct from those of other known exine mutants. The double and triple mutant combinations did not result in the appearance of novel phenotypes or enhancement of single mutant phenotypes. This implies that each of the three genes is required to provide an indispensable subset of fatty acid-derived components within the sporopollenin biosynthesis framework.


Subject(s)
Arabidopsis Proteins/metabolism , Arabidopsis/enzymology , Biopolymers/biosynthesis , Carotenoids/biosynthesis , Cytochrome P-450 CYP4A/metabolism , Fatty Acids/metabolism , Pollen/enzymology , Alleles , Arabidopsis/cytology , Arabidopsis/genetics , Arabidopsis/ultrastructure , Arabidopsis Proteins/genetics , Biocatalysis , Chromosome Mapping , Cytochrome P-450 CYP4A/genetics , Gene Expression Regulation, Plant , Genes, Plant , Genetic Complementation Test , Hydroxylation , Mutation/genetics , Organ Specificity , Phenols/metabolism , Phenotype , Pollen/cytology , Pollen/genetics , Pollen/ultrastructure
14.
PLoS Genet ; 3(10): 1848-61, 2007 Oct.
Article in English | MEDLINE | ID: mdl-17937500

ABSTRACT

The female gametophyte of flowering plants, the embryo sac, develops within the diploid (sporophytic) tissue of the ovule. While embryo sac-expressed genes are known to be required at multiple stages of the fertilization process, the set of embryo sac-expressed genes has remained poorly defined. In particular, the set of genes responsible for mediating intracellular communication between the embryo sac and the male gametophyte, the pollen grain, is unknown. We used high-throughput cDNA sequencing and whole-genome tiling arrays to compare gene expression in wild-type ovules to that in dif1 ovules, which entirely lack embryo sacs, and myb98 ovules, which are impaired in pollen tube attraction. We identified nearly 400 genes that are downregulated in dif1 ovules. Seventy-eight percent of these embryo sac-dependent genes were predicted to encode for secreted proteins, and 60% belonged to multigenic families. Our results define a large number of candidate extracellular signaling molecules that may act during embryo sac development or fertilization; less than half of these are represented on the widely used ATH1 expression array. In particular, we found that 37 out of 40 genes encoding Domain of Unknown Function 784 (DUF784) domains require the synergid-specific transcription factor MYB98 for expression. Several DUF784 genes were transcribed in synergid cells of the embryo sac, implicating the DUF784 gene family in mediating late stages of embryo sac development or interactions with pollen tubes. The coexpression of highly similar proteins suggests a high degree of functional redundancy among embryo sac genes.


Subject(s)
Arabidopsis Proteins/genetics , Arabidopsis/genetics , Gene Expression Regulation, Plant , Genome , DNA, Complementary/metabolism , Diploidy , Genes, Plant , Genome, Plant , Plant Proteins/chemistry , Pollen/metabolism , Pollen Tube , Signal Transduction
15.
PLoS Genet ; 3(10): 1965-74, 2007 Oct.
Article in English | MEDLINE | ID: mdl-17953486

ABSTRACT

Autonomous chromosomes are generated in yeast (yeast artificial chromosomes) and human fibrosarcoma cells (human artificial chromosomes) by introducing purified DNA fragments that nucleate a kinetochore, replicate, and segregate to daughter cells. These autonomous minichromosomes are convenient for manipulating and delivering DNA segments containing multiple genes. In contrast, commercial production of transgenic crops relies on methods that integrate one or a few genes into host chromosomes; extensive screening to identify insertions with the desired expression level, copy number, structure, and genomic location; and long breeding programs to produce varieties that carry multiple transgenes. As a step toward improving transgenic crop production, we report the development of autonomous maize minichromosomes (MMCs). We constructed circular MMCs by combining DsRed and nptII marker genes with 7-190 kb of genomic maize DNA fragments containing satellites, retroelements, and/or other repeats commonly found in centromeres and using particle bombardment to deliver these constructs into embryogenic maize tissue. We selected transformed cells, regenerated plants, and propagated their progeny for multiple generations in the absence of selection. Fluorescent in situ hybridization and segregation analysis demonstrated that autonomous MMCs can be mitotically and meiotically maintained. The MMC described here showed meiotic segregation ratios approaching Mendelian inheritance: 93% transmission as a disome (100% expected), 39% transmission as a monosome crossed to wild type (50% expected), and 59% transmission in self crosses (75% expected). The fluorescent DsRed reporter gene on the MMC was expressed through four generations, and Southern blot analysis indicated the encoded genes were intact. This novel approach for plant transformation can facilitate crop biotechnology by (i) combining several trait genes on a single DNA fragment, (ii) arranging genes in a defined sequence context for more consistent gene expression, and (iii) providing an independent linkage group that can be rapidly introgressed into various germplasms.


Subject(s)
Gene Transfer Techniques , Genes, Plant , Meiosis , Zea mays/genetics , Centromere/ultrastructure , Chromosome Mapping , Crops, Agricultural/genetics , Genetic Engineering , Genetic Techniques , Genome, Plant , Models, Genetic , Plants, Genetically Modified , Plasmids/metabolism , Transfection , Transformation, Genetic , Zea mays/ultrastructure
16.
Development ; 133(23): 4761-9, 2006 Dec.
Article in English | MEDLINE | ID: mdl-17079265

ABSTRACT

In flowering plants, sperm cells develop in the pollen cytoplasm and are transported through floral tissues to an ovule by a pollen tube, a highly polarized cellular extension. After targeting an ovule, the pollen tube bursts, releasing two sperm that fertilize an egg and a central cell. Here, we identified the gene encoding Arabidopsis HAP2, demonstrating that it is allelic to GCS1. HAP2 is expressed only in the haploid sperm and is required for efficient pollen tube guidance to ovules. We identified an insertion (hap2-1) that disrupts the C-terminal portion of the protein and tags mutant pollen grains with the beta-glucuronidase reporter. By monitoring reporter expression, we showed that hap2-1 does not diminish pollen tube length in vitro or in the pistil, but it reduces ovule targeting by twofold. In addition, we show that the hap2 sperm that are delivered to ovules fail to initiate fertilization. HAP2 is predicted to encode a protein with an N-terminal secretion signal, a single transmembrane domain and a C-terminal histidine-rich domain. These results point to a dual role for HAP2, functioning in both pollen tube guidance and in fertilization. Moreover, our findings suggest that sperm, long considered to be passive cargo, are involved in directing the pollen tube to its target.


Subject(s)
Arabidopsis Proteins/genetics , Arabidopsis/growth & development , Arabidopsis/genetics , Genes, Plant , Transcription Factors/genetics , Amino Acid Sequence , Arabidopsis/physiology , Base Sequence , Carrier Proteins , DNA, Plant/genetics , Fertilization/genetics , Gene Expression Regulation, Plant , Membrane Proteins/genetics , Molecular Sequence Data , Mutation , Plants, Genetically Modified , Pollen Tube/growth & development , Sequence Homology, Amino Acid
17.
BMC Plant Biol ; 6: 7, 2006 Apr 05.
Article in English | MEDLINE | ID: mdl-16595022

ABSTRACT

BACKGROUND: Pollen tubes deliver sperm after navigating through flower tissues in response to attractive and repulsive cues. Genetic analyses in maize and Arabidopsis thaliana and cell ablation studies in Torenia fournieri have shown that the female gametophyte (the 7-celled haploid embryo sac within an ovule) and surrounding diploid tissues are essential for guiding pollen tubes to ovules. The variety and inaccessibility of these cells and tissues has made it challenging to characterize the sources of guidance signals and the dynamic responses they elicit in the pollen tubes. RESULTS: Here we developed an in vitro assay to study pollen tube guidance to excised A. thaliana ovules. Using this assay we discerned the temporal and spatial regulation and species-specificity of late stage guidance signals and characterized the dynamics of pollen tube responses. We established that unfertilized A. thaliana ovules emit diffusible, developmentally regulated, species-specific attractants, and demonstrated that ovules penetrated by pollen tubes rapidly release diffusible pollen tube repellents. CONCLUSION: These results demonstrate that in vitro pollen tube guidance to excised A. thaliana ovules efficiently recapitulates much of in vivo pollen tube behaviour during the final stages of pollen tube growth. This assay will aid in confirming the roles of candidate guidance molecules, exploring the phenotypes of A. thaliana pollen tube guidance mutants and characterizing interspecies pollination interactions.


Subject(s)
Arabidopsis/metabolism , Flowers/metabolism , Pollen/physiology , Signal Transduction , Arabidopsis/cytology , Cues , Flowers/anatomy & histology , Flowers/cytology , Gene Expression Regulation, Plant , Species Specificity , Time Factors
18.
Genome Res ; 16(3): 355-64, 2006 Mar.
Article in English | MEDLINE | ID: mdl-16461884

ABSTRACT

Pericentromeres are exceptional genomic regions: in animals they contain extensive segmental duplications implicated in gene creation, and in plants they sustain rearrangements and insertions uncommon in euchromatin. To examine the mechanisms and patterns of plant pericentromere evolution, we compared pericentromere sequence from four Brassicaceae species separated by <15 million years (Myr). This flowering plant family is ideal for studying relationships between genome reorganization and pericentromere evolution-its members have undergone recent polyploidization and hybridization, with close relatives changing in genome size and chromosome number. Through sequence and hybridization analyses, we examined regions from Arabidopsis arenosa, Capsella rubella, and Olimarabidopsis pumila that are homologous to Arabidopsis thaliana pericentromeres (peri-CENs) III and V, and used FISH to demonstrate they have been maintained near centromere satellite arrays in each species. Sequence analysis revealed a set of highly conserved genes, yet we discovered substantial differences in intergenic length and species-specific changes in sequence content and gene density. We discovered that A. thaliana has undergone recent, significant expansions within its pericentromeres, in some cases measuring hundreds of kilobases; these findings are in marked contrast to euchromatic segments in these species that exhibit only minor length changes. While plant pericentromeres do contain some duplications, we did not find evidence of extensive segmental duplications, as has been documented in primates. Our data support a model in which plant pericentromeres may experience selective pressures distinct from euchromatin, tolerating rapid, dynamic changes in structure and sequence content, including large insertions of mobile elements, 5S rDNA arrays and pseudogenes.


Subject(s)
Centromere/genetics , Evolution, Molecular , Arabidopsis/genetics , Arabidopsis Proteins/genetics , Centromere/metabolism , Chromosomes, Artificial, Bacterial , Conserved Sequence , DNA Transposable Elements/genetics , DNA, Ribosomal/genetics , Genetic Variation , In Situ Hybridization, Fluorescence , Models, Genetic , Molecular Sequence Data , Sequence Homology, Nucleic Acid , Species Specificity
19.
CSH Protoc ; 2006(5)2006 Oct 01.
Article in English | MEDLINE | ID: mdl-22485931
20.
BMC Plant Biol ; 5: 22, 2005 Oct 07.
Article in English | MEDLINE | ID: mdl-16212660

ABSTRACT

BACKGROUND: Callose (beta-1,3 glucan) separates developing pollen grains, preventing their underlying walls (exine) from fusing. The pollen tubes that transport sperm to female gametes also contain callose, both in their walls as well as in the plugs that segment growing tubes. Mutations in CalS5, one of several Arabidopsis beta-1,3 glucan synthases, were previously shown to disrupt callose formation around developing microspores, causing aberrations in exine patterning, degeneration of developing microspores, and pollen sterility. RESULTS: Here, we describe three additional cals5 alleles that similarly alter exine patterns, but instead produce fertile pollen. Moreover, one of these alleles (cals5-3) resulted in the formation of pollen tubes that lacked callose walls and plugs. In self-pollinated plants, these tubes led to successful fertilization, but they were at a slight disadvantage when competing with wild type. CONCLUSION: Contrary to a previous report, these results demonstrate that a structured exine layer is not required for pollen development, viability or fertility. In addition, despite the presence of callose-enriched walls and callose plugs in pollen tubes, the results presented here indicate that callose is not required for pollen tube functions.


Subject(s)
Arabidopsis/metabolism , Arabidopsis/ultrastructure , Glucans/physiology , Alleles , Arabidopsis/growth & development , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Chromosome Mapping , Genes, Plant/physiology , Glucans/analysis , Glucosyltransferases/genetics , Glucosyltransferases/metabolism , Mutation , Phenotype , Pollen/growth & development , Pollen/physiology , Pollen/ultrastructure , RNA, Plant/metabolism , Reproduction
SELECTION OF CITATIONS
SEARCH DETAIL
...