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1.
Genes Dev ; 27(22): 2459-72, 2013 Nov 15.
Article in English | MEDLINE | ID: mdl-24240236

ABSTRACT

Cdc7 kinase regulates DNA replication. However, its role in DNA repair and recombination is poorly understood. Here we describe a pathway that stabilizes the human Cdc7-ASK (activator of S-phase kinase; also called Dbf4), its regulation, and its function in cellular responses to compromised DNA replication. Stalled DNA replication evoked stabilization of the Cdc7-ASK (Dbf4) complex in a manner dependent on ATR-Chk1-mediated checkpoint signaling and its interplay with the anaphase-promoting complex/cyclosome(Cdh1) (APC/C(Cdh1)) ubiquitin ligase. Mechanistically, Chk1 kinase inactivates APC/C(Cdh1) through degradation of Cdh1 upon replication block, thereby stabilizing APC/C(Cdh1) substrates, including Cdc7-ASK (Dbf4). Furthermore, motif C of ASK (Dbf4) interacts with the N-terminal region of RAD18 ubiquitin ligase, and this interaction is required for chromatin binding of RAD18. Impaired interaction of ASK (Dbf4) with RAD18 disables foci formation by RAD18 and hinders chromatin loading of translesion DNA polymerase η. These findings define a novel mechanism that orchestrates replication checkpoint signaling and ubiquitin-proteasome machinery with the DNA damage bypass pathway to guard against replication collapse under conditions of replication stress.


Subject(s)
Cell Cycle Proteins/metabolism , DNA Damage , DNA Replication , Antigens, CD , Ataxia Telangiectasia Mutated Proteins/metabolism , Cadherins/metabolism , Cell Cycle Proteins/genetics , Cell Line, Tumor , Checkpoint Kinase 1 , Enzyme Stability , Genes, APC/physiology , HEK293 Cells , HeLa Cells , Humans , Protein Binding , Protein Kinases/metabolism , Protein Serine-Threonine Kinases/metabolism , Signal Transduction
2.
J Exp Bot ; 61(9): 2395-401, 2010 May.
Article in English | MEDLINE | ID: mdl-20363868

ABSTRACT

Protoplast cultures are remarkable examples of plant cell dedifferentiation. The state of dedifferentiation is evidenced by changes in cell morphology, genome organization, as well as by the capability of protoplasts to differentiate into multiple types of cells (depending on the type of the stimulus applied). The first change in the genome structure is connected with large-scale chromatin decondensation, affecting chromocentres involving various types of these repetitive sequences. This paper describes not only the de- and recondensation of satellite DNA type I and 5S rDNA repetitive sequences, but it also compares the recondensation level of chromatin with the levels of oxidative stress which were decreased by using an antioxidant, as well as the capabilities of the antioxidative systems within protoplasts, during the first 72 h of their culture. It is demonstrated that the treatment of protoplasts with ascorbic acid not only decreased the level of oxidative stress but also positively stimulated the expression of the ascorbate peroxidase and catalase. It also led to a greater recondensation of the chromatin (when compared to the untreated protoplasts); in addition, it supported cell proliferation. It is concluded that large-scale genome relaxation is more directly connected with oxidative stress than with large changes in the expression of genes; and further, that its recondensation is related to the start of (as well as the level of) protection by the antioxidative systems.


Subject(s)
Cell Nucleus/genetics , Cucumis sativus/genetics , Cucumis sativus/metabolism , Microsatellite Repeats , Oxidative Stress , Protoplasts/metabolism , Ascorbate Peroxidases , Catalase/genetics , Catalase/metabolism , Cell Nucleus/enzymology , Cell Nucleus/metabolism , Cucumis sativus/enzymology , Peroxidases/genetics , Peroxidases/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Protoplasts/enzymology
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