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1.
Transfusion ; 41(9): 1154-8, 2001 Sep.
Article in English | MEDLINE | ID: mdl-11552074

ABSTRACT

BACKGROUND: Dimethylmethylene blue (DMMB) has been used to photoinactivate a number of model viruses, including VSV, in RBC suspensions under conditions that preserve in vitro RBC properties during storage. The relative sensitivity of duck HBV (DHBV) and VSV to photoinactivation by DMMB was investigated by performing an indirect immunofluorescence assay (IFA) using primary duck hepatocyte (PDH) cultures or a standard plaque assay for the respective viruses. STUDY DESIGN AND METHODS: DMMB was added to 45-percent Hct, WBC-reduced, oxygenated AS-3 RBCs at 10-, 1-, and 0.1-microM concentrations. Samples (1-mm thick) were illuminated with 5.4-mW per cm(2) of red light for 2 or 9 seconds. Unilluminated samples without DMMB or with 10 microM DMMB served as control. RESULTS: DHBV and VSV were rapidly photoinactivated by DMMB in a concentration and light-dose-dependent fashion. Neither virus was substantially inactivated by incubation with DMMB in the dark. For a given light exposure, DHBV required a concentration of DMMB one-one hundredth that of VSV to achieve approximately the same level of inactivation. CONCLUSION: DHBV appears to be considerably more sensitive than VSV to DMMB photoinactivation. Photoinactivation in 45-percent Hct RBCs can be achieved in seconds by using micromolar quantities of dye.


Subject(s)
Erythrocytes/virology , Hepatitis B Virus, Duck/drug effects , Hepatitis B Virus, Duck/radiation effects , Light , Methylene Blue/pharmacology , Virus Activation/drug effects , Dose-Response Relationship, Drug , Dose-Response Relationship, Radiation , Fluorescent Antibody Technique, Indirect , Humans , Methylene Blue/analogs & derivatives
3.
Virology ; 249(1): 68-79, 1998 Sep 15.
Article in English | MEDLINE | ID: mdl-9740778

ABSTRACT

Chronic infection of woodchucks with woodchuck hepatitis virus (WHV) invariably leads, within 2-4 years, to the appearance of hepatocellular carcinoma (HCC). HCC is preceded by an extended period of chronic liver damage, probably resulting from the immune response to viral antigens. It may be that infection itself also induces changes in the hepatocyte population. To begin to identify some of the changes in the liver prior to the appearance of HCC, monoclonal antibodies (MAbs) were generated from mice immunized with hepatocytes from a woodchuck chronically infected with WHV or with a tumor lysate. Immunofluorescence microscopy was used to select MAbs that reacted with host markers whose patterns of expression would distinguish chronically infected from uninfected liver or from liver tumors. One of these MAbs (2F2) reacted strongly with a subset of hepatocytes in chronically infected liver; a similar staining pattern was not detected in uninfected or transiently infected liver. Evidence is presented that this strong staining reaction reflects the overexpression or accumulation of the hepatocyte-specific intermediate filament protein, cytokeratin K18, a protein previously implicated in cryptogenic cirrhosis of the liver in humans (Ku, N. O. , Wright, T. L., Terrault, N. A., Gish, R., and Omary, M. B. J. Clin. Invest. 99: 19-23, 1997). Double immunofluorescent staining with antibodies to K18 and M-envelope protein of WHV suggested that strong reactivity to K18 was limited to cells expressing high levels of one or both of the large viral-envelope proteins, M and L; however, high expression of these viral proteins was not always associated with a strong K18 staining reaction.


Subject(s)
Hepatitis B Virus, Woodchuck , Hepatitis B/metabolism , Keratins/biosynthesis , Liver/metabolism , Animals , Antibodies, Monoclonal , Chronic Disease , Female , Hepatitis B/pathology , Immunohistochemistry , Liver/pathology , Mice , Mice, Inbred BALB C
4.
Cancer Epidemiol Biomarkers Prev ; 7(7): 559-65, 1998 Jul.
Article in English | MEDLINE | ID: mdl-9681522

ABSTRACT

The risk of hepatocellular carcinoma (HCC) varies significantly among hepatitis B virus (HBV) carriers from different geographic regions. We compared serological markers of HBV infection in adult male carriers from Haimen City, China and Senegal, West Africa, where the prevalence of chronic infection is similar. HCC mortality among HBV carriers is much higher in Haimen City than it is in Senegal (age-standardized rate, 878 versus 68 per l0(5) person-years). A dramatic difference was observed when HBV DNA levels in serum were assessed among carriers by Southern blot. In the Senegalese group (n = 289), 14.5% were HBV DNA positive by Southern blot in their 20s, and this percentage declined in each subsequent decade of age to 3.3, 2.9, and 0% thereafter. In the Chinese group (n = 285), a higher prevalence of HBV DNA positivity and a less consistent reduction were seen; 29.4% were positive in their 20s, and 30.2, 23.6, and 20.6%, respectively, were positive in each subsequent decade of age. Among 102 male Asian-American HBV carriers, the prevalence of HBV DNA positivity was intermediate between the Chinese and Senegalese populations (36.8, 10.7, 3.0, and 4.6% in each subsequent decade of age). Viral titers were similar among those who were HBV DNA positive in all three populations [median value, 10(7) virions/ml (range, 10(6)-10(9) virions/ml)]. The presence of HBV DNA in serum was positively associated with serum glutathione S-transferase, a marker of liver damage. These findings suggest that the more prolonged maintenance of productive virus infection in the Chinese carriers compared with the Senegalese carriers may explain their higher risk of HCC. This profound difference in the natural history of chronic infection may be due to earlier age of infection in China or to as yet unknown environmental or genetic factors.


Subject(s)
Carcinoma, Hepatocellular/virology , Carrier State/virology , Hepatitis B virus , Hepatitis B/virology , Liver Neoplasms/virology , Viral Load/statistics & numerical data , Adult , Age Factors , Asia/ethnology , Biomarkers/blood , Carcinoma, Hepatocellular/epidemiology , China/epidemiology , Cohort Studies , DNA, Viral/blood , Hepatitis B/epidemiology , Hepatitis B Surface Antigens/blood , Hepatitis B e Antigens/blood , Humans , Liver Neoplasms/epidemiology , Male , Middle Aged , Senegal/epidemiology , United States/epidemiology
5.
Biochim Biophys Acta ; 1395(3): 293-300, 1998 Feb 11.
Article in English | MEDLINE | ID: mdl-9512663

ABSTRACT

A cDNA encoding an avian homologue of the large subunit of replication factor C (RFC-L) has been cloned from a duck liver cDNA expression library prepared in bacteriophage lambda. The full length cDNA encodes a protein with a predicted size of approximately 130 kDa, consistent with the size of the polypeptide detected in duck liver. The duck RFC-L amino acid sequence shares 66.4% and 68.4% identity with mouse and human RFC-L proteins, respectively. We identified a 4kb RFC-L mRNA expressed in most duck tissues.


Subject(s)
DNA-Binding Proteins/biosynthesis , DNA-Binding Proteins/genetics , Ducks/genetics , Homeodomain Proteins , Proto-Oncogene Proteins c-bcl-2 , Repressor Proteins , Saccharomyces cerevisiae Proteins , Amino Acid Sequence , Animals , Bacteriophage lambda , Base Sequence , Cloning, Molecular , DNA Replication , DNA, Complementary , DNA-Binding Proteins/chemistry , Drosophila/genetics , Gene Library , Humans , Liver/metabolism , Macromolecular Substances , Mice , Minor Histocompatibility Antigens , Molecular Sequence Data , Molecular Weight , Replication Protein C , Saccharomyces cerevisiae/genetics , Sequence Alignment , Sequence Homology, Amino Acid
6.
J Virol ; 71(6): 4829-31, 1997 Jun.
Article in English | MEDLINE | ID: mdl-9151880

ABSTRACT

As an approach to identifying hepatocyte receptors for the avian hepadnavirus duck hepatitis B virus (DHBV), hybridomas were prepared from mice immunized with permissive duck hepatocytes. Monoclonal antibodies (MAbs) were screened for the ability to inhibit binding of DHBV particles to primary duck hepatocytes and to block infection. We identified two MAbs which partially blocked binding and caused marked inhibition of infection of primary duck hepatocytes with DHBV. Lack of cross-reactivity with DHBV envelope proteins suggested that inhibition of infection was due to specific interaction between the antibodies and a host cell surface molecule. Both MAbs immunoprecipitated a 55-kDa protein (p55) expressed in duck liver and several other duck tissues. p55 homologs were also identified in other birds and mammals. We predict from our data that only a small proportion of total cellular p55 molecules are expressed at the surfaces of hepatocytes and that p55 is involved in some early step in the infectious pathway.


Subject(s)
Antibodies, Monoclonal/immunology , Hepatitis B Virus, Duck/growth & development , Liver/immunology , Receptors, Virus/immunology , Animals , Antigen-Antibody Reactions , Cells, Cultured , Ducks , Hepatitis B Antigens/metabolism , Molecular Weight , Receptors, Virus/chemistry
7.
J Virol ; 71(2): 1107-14, 1997 Feb.
Article in English | MEDLINE | ID: mdl-8995631

ABSTRACT

We have investigated the membrane topology of the large envelope protein of duck hepatitis B virus (DHBV) by protease protection and Western blot analysis, using monoclonal antibodies specific for the pre-S and S regions of the DHBV envelope to characterize protease-resistant polypeptides. These studies showed that DHBV L protein exhibits a mixed membrane topology similar to that of human hepatitis B virus L, with approximately half of the L molecules displaying pre-S on the surface of virus particles and the remainder with pre-S sequestered inside the virus envelope. The C-terminal region of DHBV pre-S was susceptible to protease digestion on all DHBV particle L protein, indicating that this region was externally disposed. DHBV L protein pre-S was entirely cytosolic immediately after synthesis. Our data, therefore, suggested that an intermediate form of the DHBV L molecule exists in mature envelope particles in which L is partially translocated or exists in a translocation-ready conformation. Incubation of virus particles at low pH and 37 degrees C triggered conversion of this intermediate into a fully translocated form. We have proposed a model for pre-S translocation based on our results that invokes the presence of an aqueous pore in the virus envelope, most likely created by oligomerization of transmembrane domains in the S region. The model predicts that pre-S is transported through this pore and that a loop structure is formed because the N terminus remains anchored to the inner face of the membrane. This translocation process occurs during particle morphogenesis and may also be a prerequisite to virus uncoating during infection.


Subject(s)
Hepatitis B Virus, Duck/physiology , Viral Envelope Proteins/physiology , Virus Assembly , Amino Acid Sequence , Biological Transport , Humans , Molecular Sequence Data
8.
Proc Natl Acad Sci U S A ; 93(25): 14548-53, 1996 Dec 10.
Article in English | MEDLINE | ID: mdl-8962089

ABSTRACT

Secondary amyloidosis is a common disease of water fowl and is characterized by the deposition of extracellular fibrils of amyloid A (AA) protein in the liver and certain other organs. Neither the normal role of serum amyloid A (SAA), a major acute phase response protein, nor the causes of secondary amyloidosis are well understood. To investigate a possible genetic contribution to disease susceptibility, we cloned and sequenced SAA cDNA derived from livers of domestic ducks. This revealed that the three C-terminal amino acids of SAA are removed during conversion to insoluble AA fibrils. Analysis of SAA cDNA sequences from several animals identified a distinct genetic dimorphism that may be relevant to susceptibility to secondary amyloid disease. The duck genome contained a single copy of the SAA gene that was expressed in liver and lung tissue of ducklings, even in the absence of induction of acute phase response. Genetic analysis of heterozygotes indicated that only one SAA allele is expressed in livers of adult birds. Immunofluorescence staining of livers from adult ducks displaying early symptoms of amyloidosis revealed what appear to be amyloid deposits within hepatocytes that are expressing unusually high amounts of SAA protein. This observation suggests that intracellular deposition of AA may represent an early event during development of secondary amyloidosis in older birds.


Subject(s)
Amyloidosis/veterinary , Liver Diseases/veterinary , RNA, Messenger/genetics , Serum Amyloid A Protein/genetics , Amino Acid Sequence , Amyloidosis/genetics , Animals , Base Sequence , Ducks , Liver Diseases/genetics , Molecular Sequence Data , RNA, Messenger/analysis
9.
J Virol ; 69(8): 4814-22, 1995 Aug.
Article in English | MEDLINE | ID: mdl-7609048

ABSTRACT

To test the hypothesis that susceptibility of hepatocytes to duck hepatitis B virus (DHBV) infection requires cell surface receptors that bind the virus in a specific manner, we developed an assay for the binding of DHBV particles to monolayers of intact cells, using radiolabeled immunoglobulin G specific for DHBV envelope protein. Both noninfectious DHBV surface antigen particles and infectious virions bound to a susceptible fraction (approximately 60%) of Pekin duck hepatocytes. In contrast, binding did not occur to cells that were not susceptible to DHBV infection, including Pekin duck fibroblasts and chicken hepatocytes, and binding to Muscovy duck hepatocytes, which are only weakly susceptible (approximately 1% of cells) to DHBV infection, was virtually undetectable. Within a monolayer, individual Pekin duck hepatocytes appeared to differ markedly in the capacity to bind DHBV, which may explain difficulties that have been encountered in infecting 100% of cells in culture. We have also found that the loss of susceptibility to infection with DHBV that occurs when Pekin duck hepatocytes are maintained for more than a few days in culture correlates with a decline in the number of cells that bind virus particles efficiently. All of these results support the interpretation that the binding event detected by our assay is associated with the interaction between DHBV and specific cell surface receptors that are required for initiation of infection. Our assay may facilitate isolation and identification of hepatocyte receptors for this virus.


Subject(s)
Hepadnaviridae Infections/metabolism , Hepatitis B Virus, Duck/metabolism , Receptors, Virus/metabolism , Animals , Antibodies, Monoclonal , Cells, Cultured , Chickens , Disease Susceptibility , Ducks , Hepadnaviridae Infections/immunology , Hepadnaviridae Infections/virology , Hepatitis B Surface Antigens/immunology , Hepatitis B Virus, Duck/immunology , Membrane Fusion , Virion/immunology , Virion/metabolism
10.
J Virol ; 68(4): 2487-94, 1994 Apr.
Article in English | MEDLINE | ID: mdl-7511172

ABSTRACT

To test the hypothesis that in vivo resistance to hepadnavirus infection was due to resistance of host hepatocytes, we isolated hepatocytes from Muscovy ducklings and chickens, birds that have been shown to be resistant to duck hepatitis B virus (DHBV) infection, and attempted to infect them in vitro with virus from congenitally infected Pekin ducks. Chicken hepatocytes were resistant to infection, but we were able to infect approximately 1% of Muscovy duck hepatocytes in culture. Infection requires prolonged incubation with virus at 37 degrees C. Virus spread occurs in the Muscovy cultures, resulting in 5 to 10% DHBV-infected hepatocytes by 3 weeks after infection. The relatively low rate of accumulation of DHBV DNA in infected Muscovy hepatocyte cultures is most likely due to inefficient spread of virus infection; in the absence of virus spread, the rates of DHBV replication in Pekin and Muscovy hepatocyte cultures are similar. 5-Azacytidine treatment can induce susceptibility to DHBV infection in resistant primary Pekin hepatocytes but appears to have no similar effect in Muscovy cultures. The relatively inefficient infection of Muscovy duck hepatocytes that we have described may account for the absence of a detectable viremia in Muscovy ducklings experimentally infected with DHBV.


Subject(s)
Ducks/microbiology , Hepatitis B Virus, Duck/growth & development , Liver/microbiology , Animals , Azacitidine/pharmacology , Cells, Cultured , Chickens/microbiology , Hepatitis B Virus, Duck/drug effects , Hepatitis B Virus, Duck/pathogenicity , Immunity, Innate/drug effects , Liver/cytology , Species Specificity , Suramin/pharmacology , Virus Replication/drug effects
11.
Br Med Bull ; 46(2): 329-53, 1990 Apr.
Article in English | MEDLINE | ID: mdl-2198990

ABSTRACT

Hepatitis B virus was discovered to be the causative agent of hepatitis B (serum hepatitis) almost 25 years ago. However, a detailed understanding of the biology of this clinically important virus has only developed in the last ten years. Among the problems faced by early researchers, were the very limited host range exhibited by HBV and the lack of any tissue culture system in which to propagate the virus. The advent of molecular cloning techniques and the discovery of HBV-like viruses in certain animals, lead to rapid advances in the late 1970s. More recently, several systems have been described for studying hepadnavirus infection and replication in vitro, which promise to yield exciting developments in the near future. In this chapter we will review the molecular biology of HBV replication, and the contributions made by the various animal models and in vitro systems to our present level of understanding.


Subject(s)
DNA Replication , Hepadnaviridae/genetics , Hepatitis B virus/genetics , Virus Replication/genetics , Animals , Gene Expression Regulation, Viral , Hepadnaviridae/physiology , Hepatitis B virus/physiology , Humans , Viral Proteins/genetics
12.
Virology ; 172(2): 564-72, 1989 Oct.
Article in English | MEDLINE | ID: mdl-2678730

ABSTRACT

Primary duck hepatocytes maintained in serum-free culture medium containing dimethyl sulfoxide support efficient replication of duck hepatitis B virus following infection in vitro. Cells remain susceptible to infection for at least 2 weeks after plating, allowing spread of virus via repeat cycles of infection. Up to 100% of cultured hepatocytes can be infected by prolonged exposure to high titer virus inoculum at 37 degrees. We have identified a fraction of infecting virus which binds tightly to cells at 4 degrees, presumably due to association with high affinity receptors on the hepatocyte membrane. The rate at which tightly bound virus is internalized at 37 degrees appears slow, with uptake occurring over a period of at least 16 hr.


Subject(s)
DNA, Viral/analysis , Dimethyl Sulfoxide/pharmacology , Hepatitis B Virus, Duck/physiology , Liver/microbiology , Adsorption , Animals , Blotting, Southern , Cells, Cultured , Culture Media , DNA Replication , Ducks , Fluorescent Antibody Technique , Hepatitis B Virus, Duck/metabolism , Liver/cytology , Nucleic Acid Hybridization , Temperature , Virus Replication
13.
J Virol ; 62(9): 3513-6, 1988 Sep.
Article in English | MEDLINE | ID: mdl-2841501

ABSTRACT

Transfection of the human hepatocellular carcinoma cell line HuH7 with a plasmid containing a tandem copy of the duck hepatitis B virus DNA sequence resulted in transient replication of the virus. Viral particles secreted by transfected HuH7 cells exhibited physical properties similar to those of serum-derived duck hepatitis B virus and were infectious in primary duck hepatocyte cultures.


Subject(s)
DNA, Viral/biosynthesis , Hepatitis B virus/genetics , Virion/physiology , Animals , Carcinoma, Hepatocellular , Cells, Cultured , Fluorescent Antibody Technique , Hepatitis B virus/physiology , Humans , Liver/microbiology , Liver Neoplasms , Nucleic Acid Hybridization , Transfection , Tumor Cells, Cultured , Virus Replication
14.
J Virol ; 61(5): 1384-90, 1987 May.
Article in English | MEDLINE | ID: mdl-2437317

ABSTRACT

DNA from the pre-S region of the duck hepatitis B virus (DHBV) genome was inserted into an open reading frame vector designed to give high-level expression in Escherichia coli. The resulting fusion protein contained the first 8 amino acids of beta-galactosidase, 86 amino acids of the DHBV pre-S region, and 219 amino acids of chloramphenicol acetyltransferase at the C terminus (beta-gal:pre-S:CAT). Rabbit antiserum against purified beta-gal:pre-S:CAT was used to identify pre-S-containing polypeptides in DHBV particles by Western blotting. A dominant species of 36 kilodaltons (kDa) was identified. Antiserum against the major 17-kDa DHBsAg polypeptide also reacted with the 36-kDa protein. This suggests that the DHBV envelope gene polypeptides share the same carboxyl terminus, but differ in the sites from which translation is initiated. N-linked carbohydrate was not detected on either the 17- or 36-kDa envelope proteins. Anti-beta-gal:pre-S:CAT abolished infectivity of the virus in an in vitro assay. Thus, the pre-S region is exposed on the surfaces of infectious virions and may be directly involved in binding of virus to host-cell receptors.


Subject(s)
Hepatitis B Surface Antigens/analysis , Hepatitis B virus/analysis , Protein Precursors/analysis , Viral Envelope Proteins/analysis , Antibodies, Viral/immunology , Antigens, Viral/analysis , Cloning, Molecular , Ducks , Epitopes , Glycoproteins/analysis , Hepatitis B virus/genetics , Immunologic Techniques , Molecular Weight , Neutralization Tests , Protein Precursors/immunology , Transcription, Genetic , Viral Envelope Proteins/genetics , Viral Envelope Proteins/immunology
15.
J Med Virol ; 20(3): 229-46, 1986 Nov.
Article in English | MEDLINE | ID: mdl-2946812

ABSTRACT

The hepatitis B virus (HBV) genome carries an open reading frame of 462 bases, the X region, but the corresponding protein has yet to be identified as a natural product. In rodent cells cotransformed with the thymidine kinase gene of herpes simplex virus and HBV DNA, however, Gough [1983] identified a mRNA that hybridises uniquely with the X region of the HBV genome. A large fragment of the X region was inserted into plasmid pCL19 delta Y-T in order to produce, in Escherichia coli, the X gene product, HBxAg, as a polypeptide fused to the N-terminal part of the phage lambda cro gene product. Antisera raised against this fused polypeptide gave positive immunofluorescence reactions with the transformed rodent cells. This provides direct evidence for the expression of the HBxAg gene in eukaryotic cells transformed with HBV DNA. The approach used here should be generally applicable.


Subject(s)
Genes, Viral , Hepatitis B Antigens/genetics , Hepatitis B virus/genetics , Amino Acid Sequence , Animals , Autoradiography , Bacteriophage lambda , Base Sequence , Cell Line , DNA, Viral/analysis , Electrophoresis, Agar Gel , Electrophoresis, Polyacrylamide Gel , Female , Fluorescent Antibody Technique , Hepatitis B virus/immunology , Immunologic Techniques , Plasmids , Rabbits , Rats , Transformation, Genetic
16.
J Virol ; 58(1): 17-25, 1986 Apr.
Article in English | MEDLINE | ID: mdl-3512855

ABSTRACT

Duck hepatitis B virus (DHBV) obtained from the serum of congenitally infected ducks was used to infect primary duck hepatocyte cultures 1 to 4 days after plating. Virus replication was demonstrated by the appearance, beginning at 2 days after infection, of intracellular covalently closed-circular and single-stranded DHBV DNA replicative intermediates which were not present in the inoculating virus preparation. With increasing time after infection there was further amplification of intracellular relaxed circular, covalently closed-circular, and single-stranded DHBV DNA. Cultures of primary duck hepatocytes are competent for infection with DHBV only during the first 4 days of culture. Synthesis of DHBV core antigen and DHBV surface antigen was detected by immunofluorescence in 10% of the hepatocytes in culture. De novo synthesis and release of infectious virus was also demonstrated. Therefore, all stages of viral replication were carried out by these experimentally infected primary hepatocyte cultures. This system makes it possible to study DHBV replication in vitro.


Subject(s)
Hepatitis B virus/growth & development , Liver/microbiology , Viral Proteins/biosynthesis , Virus Replication , Animals , Antibodies, Viral/immunology , Antigens, Viral/immunology , Capsid/metabolism , Cells, Cultured , DNA-Directed DNA Polymerase/metabolism , Ducks , Extracellular Space/immunology , Fluorescent Antibody Technique , Hepatitis B Surface Antigens/immunology , Hepatitis B virus/enzymology , Hepatitis B virus/immunology , Viral Core Proteins/metabolism
17.
Virology ; 135(1): 200-6, 1984 May.
Article in English | MEDLINE | ID: mdl-6375120

ABSTRACT

Infections of nonpermissive ( sup0 ) Escherichia coli by T1 phage with amber mutations in either gene 3.5 or gene 4 exhibit a variety of defective phenotypes, including premature arrest of T1 DNA synthesis, failure to make concatemeric DNA, formation of an abnormal DNA replication intermediate, failure to package phage DNA, and reduced genetic recombination. The lethal effect of gene 3.5 or 4 mutations is suppressed when the sup0 bacteria express the RecE recombination pathway. This RecE suppression occurs by partial restoration of the capacity to make concatemeric molecules and partial reversal of the DNA arrest defect which, in turn, leads to the formation of viable progeny. Infection by T1+ or by mutants defective in any of the four DNA synthesis genes (genes 1, 2, 3.5, and 4) inhibited the ATP-dependent exonuclease present in uninfected cells (presumably the RecBC enzyme, exonuclease V). Extracts from T1+ infections also showed increased levels of an ATP-independent exonuclease activity which was absent from gene 4 mutant extracts. It is concluded that gene 4, together with gene 3.5, specifies an activity related to that of the RecE exonuclease VIII and essential for T1 concatemer formation and recombination.


Subject(s)
Escherichia coli Proteins , Escherichia coli/genetics , Exodeoxyribonucleases/metabolism , Genes, Viral , Genes , Mutation , T-Phages/genetics , DNA Replication , DNA, Bacterial/genetics , DNA, Viral/genetics , Escherichia coli/enzymology , T-Phages/enzymology
18.
Virology ; 135(1): 189-99, 1984 May.
Article in English | MEDLINE | ID: mdl-6328749

ABSTRACT

Analysis of the structure of replicating phage T1 DNA has identified three major forms of T1+ intracellular DNA; (i) concatemeric molecules with single-stranded interruptions, (ii) monomer-length DNA with single-strand interruptions, and (iii) monomer-length molecules with completely intact single strands. The interruptions in concatemeric DNA are spaced at intervals, with a mean distance equivalent to one monomer length but with a broad distribution and many are in the form of gaps. Type (iii) molecules are probably derived from mature progeny phage particles disrupted during cell lysis. Under nonpermissive conditions, cells infected with amber mutants in T1 genes 3.5 and 4 show the premature arrest of phage DNA synthesis, failure to make concatemeric DNA, and reduced genetic recombination. Intracellular DNA from gene 3.5- and gene 4- infections consist of a uniform population of molecules approximately 10-12% shorter than mature monomers. They are stable throughout infection, contain single-stranded interruptions but not gaps, and are missing terminal sequences. These results are interpreted in terms of concatemer formation by end-to-end recombination between newly synthesised molecules whose terminal sequences are degraded in recombination-defective infections.


Subject(s)
DNA Replication , Escherichia coli/genetics , Genes, Viral , Mutation , T-Phages/genetics , Base Sequence , DNA Restriction Enzymes , DNA, Single-Stranded/genetics , DNA, Viral/isolation & purification , Species Specificity , Virus Replication
19.
Virology ; 105(2): 371-8, 1980 Sep.
Article in English | MEDLINE | ID: mdl-18631677

ABSTRACT

The RecE bacterial recombination pathway, expressed in strains carrying a sbcA mutation, can substitute for the function of gene 4 of phage T1. RecE will also substitute for the function of a newly discovered phage gene, 3.5. Like mutants in gene 4, gene 3.5 mutants have a DA (DNA synthesis arrest) phenotype under nonpermissive conditions. In addition to their effects on DNA synthesis, mutations in genes 3.5 and 4 profoundly depress recombination in T1. Inhibition of DNA synthesis by nalidixic acid does not effect the frequency of recombinants among the small population of progeny phage that are produced. Isolation of T1 mutants dependent on the RecE function has yielded additional mutants specifically in genes 3.5 and 4. Together, these results are interpreted to mean that these two phage genes encode components of a general recombination system, referred to as T1 Grn. During replication of T1 in conventional hosts the essential function of this system is to provide for the formation, via recombination, of concatameric DNA molecules, which are the substrates for the packaging of DNA into T1 heads.

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