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1.
J Virol Methods ; 94(1-2): 147-53, 2001 May.
Article in English | MEDLINE | ID: mdl-11337049

ABSTRACT

DNA sequence coding for a portion of DNA binding protein (amino acids 3-58) of bovine adenovirus type-3 (BAV-3) was cloned and expressed in Escherichia coli as a fusion protein with Schistosoma japonicum glutathione S-transferase. The fusion protein was affinity purified and used to immunize rabbits. Immunoprecipitation and Western blot analysis showed that the antiserum could specifically recognize a protein of 48 kDa in BAV-3-infected cells, which was produced both in early and late phases of BAV-3 life cycle. Based on the ability of antiserum to recognize DNA binding protein, a novel assay for BAV-3 quantitation was established. The assay is less time consuming and can be performed on a wide variety of bovine cells. In addition, virus titers determined by this assay are comparable to the standard plaque assay.


Subject(s)
Adenovirus E2 Proteins/analysis , Mastadenovirus/growth & development , Adenovirus E2 Proteins/genetics , Animals , Cattle , Cell Line , Chromatography, Affinity/methods , Cloning, Molecular , Gene Expression , Glutathione Transferase/genetics , Immunoenzyme Techniques , Mastadenovirus/genetics , Mastadenovirus/isolation & purification , Recombinant Fusion Proteins/genetics , Viral Plaque Assay
2.
Intervirology ; 44(6): 350-4, 2001.
Article in English | MEDLINE | ID: mdl-11805441

ABSTRACT

To identify and characterize the protein encoded by the E2A region of porcine adenovirus (PAV)-3, DNA sequence coding for a portion (amino acids 102-457) of the DNA binding protein (DBP) open reaching frame was cloned and expressed in Escherichia coli as a fusion protein with glutathione S-transferase protein of Schistosoma japonica. The affinity-purified fusion protein was used to immunize rabbits. Immunoprecipitation/Western blot analysis demonstrated that the antisera specifically recognized a protein of 50 kD in PAV-3-infected cells. Immunoperoxidase staining detected the DBP protein predominantly in the nucleus of the cells. Western blot analysis demonstrated that DBP was detected as early as 6 h after infection and remained detectable throughout the infection. Based on these results, a novel assay for quantitation of PAV-3 was established. The assay is less time consuming and can be performed in different porcine cells. In addition, virus titers determined by this assay are comparable to the standard plaque assay.


Subject(s)
Adenovirus E2 Proteins/metabolism , Adenoviruses, Porcine/metabolism , Adenovirus E2 Proteins/biosynthesis , Adenovirus E2 Proteins/genetics , Adenovirus E2 Proteins/immunology , Adenoviruses, Porcine/genetics , Adenoviruses, Porcine/isolation & purification , Animals , Antibodies, Viral/biosynthesis , Cell Line, Transformed , Glutathione Transferase/genetics , Rabbits , Recombinant Fusion Proteins/genetics , Swine , Viral Plaque Assay
3.
Biol Cell ; 93(5): 309-20, 2001 Nov.
Article in English | MEDLINE | ID: mdl-11770845

ABSTRACT

The structural basis of mitotic condensation of chromosomes is one of the problems of cell biology yet to be elucidated. A variety of approaches have been used to study this problem and a large number of hypotheses have been proposed to explain the different levels of compaction of chromatin. Xenopus egg extracts, now widely used to study various aspects of cell biology, provide a valuable tool to study mitotic condensation of chromosomes. No detailed study has however yet been reported on the submicroscopic organization of condensed chromosomes in vitro in egg extracts. We present here the results of our electron microscopic studies on the organization of condensed chromosomes in vitro, using demembranated sperm nuclei and mitotic (CSF-arrested) extracts of Xenopus laevis eggs, clarified by high speed centrifugation. Upon introduction of sperm nuclei in egg extracts, the nuclei swell and the chromatin undergoes a rapid decondensation; at this stage the chromatin is formed of 10 nm fibrils. After longer incubation, the chromatin condenses, and by 2 h chromosomal structures can be visualized by staining with DAPI or Hoechst 33258. Our results on the organization of chromosomes in different stages of condensation are discussed in relation to the different hypotheses proposed to explain the process of mitotic condensation of chromosomes. Finally, this study demonstrates the feasibility of high-resolution analysis of the process of chromosome condensation.


Subject(s)
Chromatin/ultrastructure , Chromosomes/physiology , Xenopus laevis/physiology , Animals , Cell Nucleus/physiology , Cell Nucleus/ultrastructure , Chromatin/physiology , Chromosomes/ultrastructure , Female , Male , Ovum/physiology , Spermatozoa/physiology
4.
Vet Immunol Immunopathol ; 76(3-4): 257-68, 2000 Oct 31.
Article in English | MEDLINE | ID: mdl-11044558

ABSTRACT

Replication-competent and replication-defective bovine adenovirus type 3 recombinants expressing the bovine herpesvirus type 1 (BHV-1) glycoprotein D (gD) were tested for induction of gD specific immune responses in calves using intratracheal (1st and 2nd immunization) and sub-cutaneous (3rd immunization) route of immunization. The replication-defective recombinant BAV501 induced systemic immune responses against gD as low titers of anti gD-IgG were detected in the serum. However, the efficacy of the replication-competent BAV3.E3gD to induce gD-specific antibodies in the serum and the nasal secretions was superior to that of replication-defective BAV501 when both viruses were given at the same dosage. Partial protection from challenge was induced in calves immunized with replication-competent BAV3.E3gD. A dramatic increase in the titers of anti-gD IgG and IgA levels, both in serum and nasal secretions, following BHV-1 challenge (anamnestic response) suggested that the animals immunized with replication-defective BAV501 had been primed for gD-specific antibody responses.


Subject(s)
Cattle Diseases/immunology , Herpesviridae Infections/veterinary , Herpesvirus 1, Bovine/immunology , Vaccination/veterinary , Viral Proteins/immunology , Viral Vaccines/immunology , Adenoviridae/genetics , Adenoviridae/immunology , Animals , Antibodies, Viral/analysis , Antibodies, Viral/blood , Antigens, Viral/genetics , Antigens, Viral/immunology , Cattle , Cattle Diseases/prevention & control , Cattle Diseases/virology , Enzyme-Linked Immunosorbent Assay/veterinary , Genetic Vectors/immunology , Herpesviridae Infections/immunology , Herpesviridae Infections/prevention & control , Herpesviridae Infections/virology , Herpesvirus 1, Bovine/genetics , Neutralization Tests , Vaccines, Synthetic/genetics , Vaccines, Synthetic/immunology , Viral Proteins/genetics , Viral Vaccines/genetics , Viral Vaccines/standards
5.
J Gen Virol ; 80 ( Pt 5): 1263-1269, 1999 May.
Article in English | MEDLINE | ID: mdl-10355773

ABSTRACT

To determine the potential of replication-competent (E3-deleted) bovine adenovirus-3 (BAV-3) as a delivery system for vaccine antigens in calves, we evaluated the ability of recombinant BAV-3 expressing different forms of of bovine herpesvirus-1 (BHV-1) glycoprotein gD to protect against BHV-1 infection in calves that had pre-existing BAV-3 specific antibodies. Three- to four-month-old calves, vaccinated intranasally with recombinant BAV-3 expressing full-length gD (BAV3.E3gD) or a truncated version of gD (gDt) (BAV3.E3gDt), or with E3-deleted BAV-3 (BAV3.E3d; control), were challenged with BHV-1 strain 108. Vaccination with BAV3.E3gD or BAV3.E3gDt induced gD-specific antibody responses in serum and nasal secretions, and primed calves for gD-specific lymphoproliferative responses. In addition, all calves developed complement-independent neutralizing antibodies against BHV-1. Protection against viral challenge was observed in calves vaccinated with recombinant BAV3.E3gD or BAV3.E3gDt as shown by a significant reduction in body temperature and clinical disease, and a partial reduction in the amount and duration of virus excretion in nasal secretions. These results indicate that replication-competent BAV-3-based vectors can induce protective immune responses in calves (the natural host) that have pre-existing BAV-3-specific antibodies.


Subject(s)
Adenovirus E3 Proteins/genetics , Herpesviridae Infections/veterinary , Herpesvirus 1, Bovine/immunology , Mastadenovirus/immunology , Viral Proteins/immunology , Viral Vaccines/immunology , Adenovirus E3 Proteins/immunology , Animals , Antibodies, Viral/blood , Antigens, Viral/immunology , Cattle , Cattle Diseases/immunology , Cattle Diseases/prevention & control , Genetic Vectors , Herpesviridae Infections/immunology , Herpesviridae Infections/prevention & control , Immunity, Mucosal , Immunization , Mastadenovirus/genetics , Recombinant Proteins/immunology , Vaccines, Synthetic/administration & dosage , Vaccines, Synthetic/immunology , Viral Vaccines/administration & dosage
6.
Am J Cardiol ; 83(7): 1018-21, 1999 Apr 01.
Article in English | MEDLINE | ID: mdl-10190512

ABSTRACT

Acute infarct angioplasty on aortocoronary saphenous vein grafts (SVGs) poses significant challenges because of their degenerate morphology and presence of significant thrombus. Of 370 acute, primary, or rescue myocardial infarct angioplasties performed over 3 years, 21 (5.7%) were on SVGs in patients who had undergone previous coronary artery bypass grafting a mean of 7.2 years earlier. Mean duration of chest pain to start of intervention was 3.9 +/- 3.2 hours; 6 (29%) patients presented with cardiac shock and 4 had failed treatment with thrombolytic drugs. At intervention, 11 (52%) of the culprit SVGs were totally occluded. Flow was reestablished or improved in 18 (86%), but classified as Thrombolysis In Myocardial Infarction trial grade 3 in only 10 patients (48%). Distal embolization and "no reflow" occurred with a frequency of 57% and 71%, respectively. In-hospital mortality was 19%. At 6 months, freedom from death, repeat target vessel revascularization, or recurrent myocardial infarction was 55%. In 349 patients undergoing native vessel intervention, success and Thrombolysis In Myocardial Infarction trial 3 flow rates were seen in 95% and 73% of patients, respectively, and in-hospital mortality was 7.9%. This present study demonstrates that infarct angioplasty on culprit SVGs can be successful but is associated with higher rates of embolic complications and worse acute and long-term clinical outcomes compared with a parallel experience of acute infarct angioplasty on native coronary arteries.


Subject(s)
Angioplasty, Balloon, Coronary , Coronary Angiography , Coronary Artery Bypass , Graft Occlusion, Vascular/therapy , Myocardial Infarction/therapy , Saphenous Vein/transplantation , Aged , Female , Graft Occlusion, Vascular/diagnostic imaging , Hospital Mortality , Humans , Male , Myocardial Infarction/diagnostic imaging , Myocardial Infarction/mortality , Recurrence
7.
Virology ; 253(2): 299-308, 1999 Jan 20.
Article in English | MEDLINE | ID: mdl-9918888

ABSTRACT

The mRNAs from early region 1 (E1) and pIX of bovine adenovirus type 3 (BAV-3) have been studied by Northern blot, S1 nuclease, and cDNA analysis and transcriptional maps for the regions were constructed. The transcriptional map for the E1 region of BAV-3 is different from those of mouse and human adenoviruses for which transcriptional maps for the regions have been constructed. The E1A region of BAV-3 is located between 0.8 and 10.5 map units and several different transcripts are produced from the region using alternative splice donor sites. The transcripts from the E1A region overlap with those of E1B and pIX. In BAV-3, the E1B region maps between 4.2 and 10.5 map units and encodes two major mRNA species. The mRNAs of E1B region differ from each other in that the smaller mRNA coding for the 157R protein has a large intron removed from a region corresponding to the coding region of E1B 420R protein. As in HAVs, the E1B 420R protein of BAV-3 could be translated only by internal initiation from the larger bicistronic mRNA as there are no transcripts produced exclusively for the production of 420R protein. The transcriptional unit of pIX is transcribed from an independent promoter and encodes a structural component of the adenovirus capsid. To identify and characterize the proteins produced from the region, antibodies were raised in rabbits that recognized specific proteins in Western blot and immunoprecipitation assays.


Subject(s)
Adenovirus E1A Proteins/genetics , Adenovirus E1B Proteins/genetics , Capsid Proteins , Capsid/genetics , Mastadenovirus/genetics , Adenovirus E1A Proteins/biosynthesis , Adenovirus E1B Proteins/biosynthesis , Amino Acid Sequence , Animals , Blotting, Northern , Cattle , Cell Line , Chromosome Mapping , DNA, Complementary , Gene Expression , Humans , Mice , Molecular Sequence Data , Precipitin Tests , Protein Biosynthesis , Rabbits , Sequence Analysis, DNA , Single-Strand Specific DNA and RNA Endonucleases
8.
Virus Genes ; 17(1): 99-100, 1998.
Article in English | MEDLINE | ID: mdl-9778793

ABSTRACT

We have identified and sequenced 3614 nucleotides located at the extreme right-end of the bovine adenovirus type 3 (BAV3) genome from map units 89.5-100. Analysis of the sequence revealed an inverted terminal repeat (ITR) of 195 bp, and identified five open reading frames (ORFs) designated ORF1, ORF2, ORF3, ORF4 and ORF5. When compared with known E4 ORFs of other adenoviruses, ORFs 1, 2 and 4, which code for proteins of 143, 69 and 143 amino acids respectively, were found to be unique to BAV3. ORFs 3 and 5, which code for proteins of 268 and 219 amino acids respectively, showed partial homology to the E4 34 kDa protein of human adenovirus 2. Nucleotide sequence analysis also identified two potential TATA boxes upstream of ORF1 and a potential polyadenylation signal downstream of ORF5 suggesting that E4 transcripts may be 3' co-terminal.


Subject(s)
Adenoviridae/genetics , DNA, Viral/genetics , Adenoviridae/chemistry , Adenovirus E4 Proteins/genetics , Animals , Binding Sites/genetics , Cattle , DNA, Viral/chemistry , Deoxyribonuclease EcoRI , Molecular Sequence Data , Open Reading Frames/genetics , Sequence Analysis, DNA , Terminal Repeat Sequences/genetics
9.
Virus Genes ; 16(3): 313-6, 1998.
Article in English | MEDLINE | ID: mdl-9654686

ABSTRACT

We have determined the nucleotide sequence of a 6999 base pair region of bovine adenovirus-3 covering map units 9.0 to 29.17, which contained the adenovirus homologs of IVa2 protein and the DNA replication proteins, precursor of terminal protein and DNA polymerase proteins. Analysis of the sequence for cis-acting elements suggests that transcripts of DNA polymerase and precursor of terminal protein are 3' co-terminal. In addition, this region also contains major late promoter sequence. The sequence to the left of IVa2 contains the ORF of pIX with a potential TATA box immediately upstream and two polyadenylation consensus signals immediately downstream of the ORF.


Subject(s)
Genes, pol , Mastadenovirus/genetics , Phosphoproteins/genetics , Protein Precursors/genetics , Viral Proteins/genetics , Amino Acid Sequence , Animals , Base Sequence , Cattle , DNA, Viral , Molecular Sequence Data , Sequence Analysis, DNA
10.
J Virol ; 72(2): 1394-402, 1998 Feb.
Article in English | MEDLINE | ID: mdl-9445040

ABSTRACT

The complete DNA sequence of bovine adenovirus type 3 is reported here. The size of the genome is 34,446 bp in length with a G+C content of 54%. All the genes of the early and late regions are present in the expected locations of the genome. However, the late-region genes are organized into seven families, instead of five as they are in human adenovirus type 2. The deduced amino acid sequences of open reading frames (ORFs) in the late regions and early region 2 (E2) and for IVa2 show higher degrees of homology, whereas the predicted amino acid sequences of ORFs in the E1, E3, and E4 regions and the pIX, fiber, and 33,000-molecular-weight nonstructural proteins show little or no homology with the corresponding proteins of other adenoviruses. In addition, the penton base protein lacks the integrin binding motif, RGD, but has an LDV motif instead of an MDV motif. Interestingly, as in other animal adenoviruses, the virus-associated RNA genes appear to be absent from their usual location. Sequence analysis of cDNA clones representing the early- and late-region genes identified splice acceptor and splice donor sites, polyadenylation signals and polyadenylation sites, and tripartite leader sequences.


Subject(s)
Chromosome Mapping , Genome, Viral , Mastadenovirus/genetics , Amino Acid Sequence , Animals , Cattle , Genes, Viral , Humans , Molecular Sequence Data , Sequence Alignment , Transcription, Genetic
11.
Infect Immun ; 63(10): 3846-50, 1995 Oct.
Article in English | MEDLINE | ID: mdl-7558290

ABSTRACT

Actinobacillus pleuropneumoniae can use porcine transferrin as the sole source of iron. Two proteins with molecular masses of approximately 60 kDa (TfbA) and 110 kDa have been shown to specifically bind porcine transferrin; from the TfbA protein, three isoforms from A. pleuropneumoniae serotypes 1, 5, and 7 have been identified and characterized by nucleotide sequence analysis. Here we defined the transferrin-binding region(s) of the TfbA protein of A. pleuropneumoniae serotype 7 by TnphoA mutagenesis, random mutagenesis, and peptide spot synthesis. The amino-terminal half of the TfbA molecule, which has only 36% amino acid sequence identity among the three isoforms, was shown to be responsible for transferrin binding by TnphoA mutagenesis. This result was confirmed by analysis of six random mutants with decreased transferrin binding affinity. The subsequent analysis of overlapping 16-mer peptides comprising the amino-terminal half of the TfbA molecule revealed three domains of 13 or 14 amino acids in length with transferrin-binding activity. They overlapped, or were very close to, point mutations decreasing transferrin-binding ability. The first and third domains were unique to the TfbA protein of A. pleuropneumoniae serotype 7. In contrast, the sequence of the second domain was present in almost identical forms (12 of 14 residues) in the TfbA proteins of A. pleuropneumoniae serotypes 1 and 5; in addition, a sequence consisting of functionally homologous amino acids was present in the otherwise completely distinct small transferrin-binding proteins of Neisseria gonorrhoeae (TbpB), N. meningitidis (Tbp2), and Haemophilus influenzae (Tbp2).


Subject(s)
Actinobacillus pleuropneumoniae/metabolism , Bacterial Proteins/chemistry , Carrier Proteins/chemistry , Amino Acid Sequence , Animals , Binding Sites , Carrier Proteins/genetics , Carrier Proteins/metabolism , Cattle , DNA Transposable Elements , Iron-Binding Proteins , Molecular Sequence Data , Swine , Transferrin/metabolism , Transferrin-Binding Proteins
12.
Virology ; 207(2): 429-41, 1995 Mar 10.
Article in English | MEDLINE | ID: mdl-7886947

ABSTRACT

The entry process of alphaherpesviruses consists of two steps, initial virus attachment and subsequent virus penetration involving membrane fusion. Glycoprotein D (gD) of the alphaherpesvirus bovine herpesvirus 1 (BHV 1) is an essential envelope protein, and it has been previously documented that gD plays a significant part in both of the virus entry steps. In order to gain further insight into the virus entry process, we attempted to define the essential function of BHV 1 gD. We replaced the gD transmembrane and cytoplasmic domains with a lipid-addition signal sequence from human decay accelerating factor and produced a stably transfected Madin Darby bovine kidney (MDBK) cell line that expresses a nonfusogenic, glycosylphosphatidylinositol (GPI)-anchored gD. We found that this cell line was able to support the growth of a gD gene-deletion mutant; the resultant gD mutant progeny contained the GPI-anchored gD on its virions and was able to enter into and produce a production infection in MDBK cells. This result suggests that fusion activity does not constitute the essential function of gD. In addition, we found that a gD-null virus (a virus containing no gD on its virion) could infect gD-expressing cells, but not normal MDBK cells. The ability of the gD-null virus to infect gD-expressing cells was dependent on the gD present on the cell surface, since either treating cells with phosphatidylinositol-specific phospholipase C to remove the GPI-anchored gD or incubating cells with gD monoclonal antibodies could block gD-null virus infection. This demonstrates that gD present on the cell surface can act in trans to facilitate the entry of virion lacking gD. This indicates that essential gD function can take place in the absence of gD-mediated virus attachment and membrane fusion. We also found that the gD monoclonal antibodies that block gD-null virus entry into gD-expressing cells are strictly restricted to the monoclonal antibodies that show postadsorption neutralization activity, indicating that the trans-acting function exhibited by the gD present on the cell surface represents the same function as defined by postadsorption antibody neurtralization. The results from this study suggest that the essential function of gD in virus entry is to modulate other virus-cell interaction(s) involved in productive virus penetration.


Subject(s)
Herpesvirus 1, Bovine/physiology , Herpesvirus 1, Bovine/pathogenicity , Viral Envelope Proteins/physiology , Amino Acid Sequence , Animals , Attachment Sites, Microbiological , Base Sequence , Cattle , Cells, Cultured , DNA, Viral/genetics , Gene Deletion , Gene Expression , Genes, Viral , Glycolipids/chemistry , Herpesvirus 1, Bovine/genetics , Membrane Fusion , Molecular Sequence Data , Transfection , Viral Envelope Proteins/chemistry , Viral Envelope Proteins/genetics
13.
Biol Cell ; 83(2-3): 191-200, 1995.
Article in English | MEDLINE | ID: mdl-7549914

ABSTRACT

The lampbrush chromosomes of the urodele Pleurodeles waltl have been studied using the mitosis-specific monoclonal antibody MPM-2. Immunofluorescence studies revealed that MPM-2 stains structures associated with axial granules, numerous other chromomeres, telomeres and certain chiasmata. These structures showed a negative reaction with the anti-DNA monoclonal antibody AC-30-10. In course of meiotic condensation of the chromosomes, in growing and maturating oocytes, the number of such structures associated with the chromosome axis was found to diminish progressively. These granular structures have been found to be formed by fine fibrils about 5 nm in diameter. Immunogold labeling confirmed the results of immunofluorescence studies. MPM-2 was also found to stain two other types of structures observed in association with the lampbrush chromosome axis in P waltl, viz the sphere organelle (only in later stages of oogenesis) and the structure known as 'M' which is singular to this material.


Subject(s)
Chromosomes/ultrastructure , Meiosis , Oocytes/ultrastructure , Pleurodeles/anatomy & histology , Animals , Antibodies, Monoclonal/immunology , Microscopy, Electron , Phosphoproteins/metabolism
14.
Chromosoma ; 103(7): 475-85, 1994 Dec.
Article in English | MEDLINE | ID: mdl-7720414

ABSTRACT

Monoclonal antibodies A33/22 and La11G7 have been used to study the distribution of the corresponding antigens, PwA33 and La, on the lampbrush chromosome loops and nucleoplasmic structures of P. waltl oocytes, using immunofluorescence, confocal laser scanning microscopy and immunogold labeling. The results obtained with these antibodies have been compared with those obtained with the Sm-antigen-specific monoclonal antibody Y12. All these monoclonal antibodies (mAbs) labeled the matrices of the majority of normal loops along their whole length. Nucleoplasmic RNP granules showed a strong staining with the mAbs La11G7 and Y12 throughout their mass, but with the mAb A33/22, they showed only a weak peripheral labeling in the form of patches on their surface. This patchy labeling was confirmed by confocal laser scanning microscopy. Electron microscopy revealed that this patchy labeling might be due to a hitherto undescribed type of submicroscopic granular structure, around 100 nm in either dimension, formed by 10-nm particles. Such granules were observed either attached to the RNP granules or free in the nucleoplasm, but rarely in relation with the normal loop matrices. These 100-nm granules may have a role in the movement of proteins and snRNPs inside the oocyte nuclei for storage, recycling, and/or degradation. Our results also suggest that all the microscopically visible free RNP granules of the nucleoplasm of P. waltl oocytes correspond to B snurposomes. The granules forming the B (globular) loops showed a labeling pattern similar to that of B snurposomes; their possible relationship is discussed.


Subject(s)
Autoantigens/analysis , Chromosomes/chemistry , Nuclear Proteins/analysis , Oocytes/chemistry , Pleurodeles/genetics , Ribonucleoproteins/analysis , Animals , Antibodies, Monoclonal/immunology , Autoantigens/immunology , Chromosomes/ultrastructure , Female , Fluorescent Antibody Technique , Immunohistochemistry , Microscopy, Immunoelectron , Nuclear Proteins/immunology , Oocytes/ultrastructure , Organelles/chemistry , Organelles/ultrastructure , Pleurodeles/anatomy & histology , Ribonucleoproteins/immunology , Transcription, Genetic , SS-B Antigen
15.
J Bacteriol ; 174(6): 1750-9, 1992 Mar.
Article in English | MEDLINE | ID: mdl-1548226

ABSTRACT

The folylpolyglutamate synthetase-dihydrofolate synthetase gene (folC) in Escherichia coli was deleted from the bacterial chromosome and replaced by a selectable Kmr marker. The deletion strain required a complementing gene expressing folylpolyglutamate synthetase encoded on a plasmid for viability, indicating that folC is an essential gene in E. coli. The complementing folC gene was cloned into the vector pPM103 (pSC101, temperature sensitive for replication), which segregated spontaneously at 42 degrees C in the absence of selection. This complementing plasmid was replaced in the folC deletion strain by compatible pUC plasmids containing folC genes with mutations generated in vitro, producing strains which express only mutant folylpolyglutamate synthetase. Mutant folC genes expressing insufficient enzyme activity could not complement the chromosomal deletion, resulting in retention of the pPM103 plasmid. Some mutant genes expressing low levels of enzyme activity replaced the complementing plasmid, but the strains produced were auxotrophic for products of folate-dependent pathways. The folylpolyglutamate synthetase gene from Lactobacillus casei, which may lack dihydrofolate synthetase activity, replaced the complementing plasmid, but the strain was auxotrophic for all folate end products.


Subject(s)
Escherichia coli/genetics , Genes, Bacterial , Peptide Synthases/genetics , Chromosome Deletion , Chromosomes, Bacterial/ultrastructure , Cloning, Molecular/methods , DNA Mutational Analysis , DNA, Bacterial/genetics , Escherichia coli Proteins , Multienzyme Complexes , Plasmids , Restriction Mapping , Transduction, Genetic
16.
J Biol Chem ; 266(30): 19925-9, 1991 Oct 25.
Article in English | MEDLINE | ID: mdl-1939056

ABSTRACT

The folC gene from mutant strain SF4 was cloned into a pUC19 plasmid. Expression of the mutant gene from the lac promoter of the plasmid complemented the auxotrophy for methionine of the SF4 strain. The only difference in sequence between the mutant and wild-type genes was a G925A base change resulting in an A309T amino acid change. The mutant enzyme had a 30-fold higher Km for 10-formyltetrahydrofolate as well as a 60-fold higher Km for glutamate and a 200-fold higher Km for dihydropteroate of the dihydrofolate synthetase activity. Site-specific mutagenesis was used to substitute other amino acids at codon 309. Mutants with glycine, isoleucine, and valine substitutions at this position, when expressed from multicopy plasmids, complemented the SF4 strain. The glycine mutant had properties similar to the wild-type enzyme, whereas the isoleucine and valine mutants had properties similar to the threonine mutant, SF4. Mutant genes with arginine, glutamate, and leucine substitutions, which did not complement the SF4 strain, could complement a folC deletion strain, but produced smaller colonies on complex plates and did not grow on minimal medium. In the deletion strain, an increasing requirement for folate product supplements was observed as the folylpolyglutamate synthetase-dihydrofolate synthetase activities of the complementing mutants decreased.


Subject(s)
Escherichia coli/enzymology , Mutation , Peptide Synthases/metabolism , Escherichia coli Proteins , Genetic Complementation Test , Kinetics , Multienzyme Complexes , Mutagenesis, Site-Directed , Peptide Synthases/genetics , Plasmids
17.
J Biol Chem ; 266(16): 10461-9, 1991 Jun 05.
Article in English | MEDLINE | ID: mdl-2037593

ABSTRACT

By screening approximately 10(6) plaques in a wheat DNA library with a "full-length" germin cDNA probe, two genomic clones were detected. When digested with EcoRI, one clone yielded a 2.8-kilobase pair fragment (gf-2.8) and the other yielded a 3.8-kilobase pair fragment (gf-3.8). By nucleotide sequencing, each of gf-2.8 and gf-3.8 was found to encode a complete sequence for germin and germin mRNA, and to contain appreciable amounts of 5'- and 3'-flanking sequences. The "cap" site in gf-2.8 was determined by primer extension and the corresponding site in gf-3.8 was deduced by analogy. The mRNA coding sequences in gf-2.8 and gf-3.8 are intronless and 87% homologous with one another. The 5'-flanking regions in gf-2.8 and gf-3.8 contain recognizable sites of what are probably cis-acting elements but there is otherwise little if any significant similarity between them. In addition to putative TATA and CAAT boxes in the 5'-flanking regions of gf-2.8 and gf-3.8, there are AT-rich inverted-repeats, GC boxes, long purine-rich sequences, two 19-base pair direct-repeat sequences in gf-2.8, and a remarkably long (200-base pair) inverted-repeat sequence (approximately 90% homology) in gf-3.8. An 8% difference between the mature-protein coding regions in gf-2.8 and gf-3.8 is reflected by a corresponding 7% difference between the corresponding 201-residue proteins. Most significantly, the same 8% difference between the mature-protein coding regions in gf-2.8 and gf-3.8 is allied with no change whatever in a central part (61-151) of the encoded polypeptide sequences. It seems likely that this central, strongly conserved core in the germins is of first importance in the biochemical involvements of the proteins. When an equivalence is assumed between like amino acids, the gf-2.8 and gf-3.8 germins show significant (approximately 44%) similarity to spherulins 1a and 1b of Physarum polycephalum, a similarity that increases to approximately 50% in the conserved core of germin. Near the middle (87-96) of the conserved core in the germins is a rare PH(I/T)HPRATEI decapeptide sequence which is shared by spherulins (1a and 1b) and germins (gf-2.8 and gf-3.8). These similarities are discussed in the context of evidence which can be interpreted to suggest that the biochemistry of germins and spherulins is involved with cellular, perhaps cell-wall responses to desiccation, hydration, and osmotic stress.(ABSTRACT TRUNCATED AT 400 WORDS)


Subject(s)
Glycoproteins/genetics , Plant Proteins/genetics , Triticum/genetics , Amino Acid Sequence , Autoradiography , Base Sequence , Coccidioidin/genetics , DNA/genetics , DNA Probes , Fungal Proteins/genetics , Molecular Sequence Data , Ploidies , RNA, Messenger/genetics , Restriction Mapping
18.
Arch Biochem Biophys ; 284(1): 9-16, 1991 Jan.
Article in English | MEDLINE | ID: mdl-1989505

ABSTRACT

The folC gene of Escherichia coli, cloned in a pUC19 vector, was mutagenized by progressive deletions from both the 5' and the 3' ends and by TAB linker insertion. A number of 5'-deleted genes, which had the initiator ATG codon removed, produced a truncated gene product, in reduced amounts, from a secondary initiation site. The most likely position of this site at a GTG codon located 35 codons downstream of the normal start site. This product could complement the folC mutation in E. coli strain SF4 as well as a strain deleted in the folC gene. The specific activity of extracts of the mutant enzyme are 4-16% that of the wild type enzyme for the folylpolyglutamate synthetase activity and 6-19% for the dihydrofolate synthetase activity. The relative amount of protein expressed by the mutant, compared to the wild type, in maxicells was comparable to the relative specific activity, suggesting that the kcat of the mutant enzyme is similar to that of the wild type. Mutants with up to 14 amino acids deleted from the carboxy terminal could still complement the folC deletion mutant. Seven out of ten linker insertions dispersed through the coding region of the gene showed complementation of the folC mutation in strain SF4 but none of these insertion mutants were able to complement the strain containing a deleted folC gene. None of the carboxy terminal or linker insertion mutants had a specific activity greater than 0.5% that of the wild type enzyme. The dihydrofolate synthetase and folylpolyglutamate synthetase activities behaved similarly in all mutants, both retaining a large fraction of the wild type activity in the amino terminal deletions and both being very low in the carboxy terminal deletions and linker insertion mutants. These studies are consistent with a single catalytic site for the two activities catalyzed by this enzyme.


Subject(s)
Escherichia coli/enzymology , Genes, Bacterial , Peptide Synthases/genetics , Amino Acid Sequence , Base Sequence , Cloning, Molecular , DNA Mutational Analysis , Escherichia coli/genetics , Escherichia coli Proteins , Genetic Complementation Test , Kinetics , Molecular Sequence Data , Multienzyme Complexes , Structure-Activity Relationship
19.
J Bacteriol ; 171(4): 1854-61, 1989 Apr.
Article in English | MEDLINE | ID: mdl-2467898

ABSTRACT

The folC gene of Escherichia coli is cotranscribed with an upstream gene from two promoters located in the noncoding region 5' to the coding sequence of the upstream gene. Virtually all of the expression of the folC gene product, folylpolyglutamate synthetase-dihydrofolate synthetase, is therefore due to the upstream gene promoters. No promoter activity was found in the coding sequence of the upstream gene or in the 72-base-pair noncoding region between the two genes. It is shown that a third gene, which may overlap the coding sequence of the folC gene by 8 base pairs at the 3' end, nevertheless, has an promoter independent from that of the upstream gene-folC operon. These results contrast with those presented by Nonet et al. (M. L. Nonet, C. C. Marvel, and D. Tolan, J. Biol. Chem., 262:12209-12217, 1987), who concluded that folC was cotranscribed with the gene at its 3' end and the gene upstream to folC was cotranscribed with the gene(s) further upstream. A stable stem-loop structure resembling a rho-independent terminator is present within the noncoding region between the upstream gene and the folC gene. Folypolyglutamate synthetase expression is 6- to 15-fold lower than that of the upstream gene product, suggesting that the stem-loop terminates some of the transcription from the upstream gene promoter. We found by deletion mutagenesis and cloning sequences containing the stem-loop structure into a termination reporter plasmid that this stem-loop does not act as an effective terminator of transcription. We also found that the stem-loop does not protect the upstream gene message from degradation, since expression of the upstream gene product in maxicell experiments is the same whether the stem-loop structure is present or deleted.


Subject(s)
Escherichia coli/genetics , Peptide Synthases/genetics , Promoter Regions, Genetic , DNA Mutational Analysis , Escherichia coli/enzymology , Escherichia coli Proteins , Gene Expression Regulation , Genes, Bacterial , Hydrogen Bonding , Molecular Structure , Multienzyme Complexes , RNA, Bacterial/genetics , RNA, Messenger/genetics , Restriction Mapping , Transcription, Genetic , Transduction, Genetic
20.
Biol Cell ; 64(3): 343-52, 1988.
Article in English | MEDLINE | ID: mdl-3067806

ABSTRACT

The distribution of 2 nuclear antigens in the interphase nuclei of liver of Pleurodeles waltl was determined with the help of monoclonal antibodies, using immunofluorescence for light microscopy and indirect immunoperoxidase and immunogold labeling procedures for electron microscopic localization. The antibodies C36/1 and A33/22 label antigens with relative molecular masses of 270 kDa and 80 kDa, and isoelectric points of 7.0 and 6.4, respectively. The liver of urodels is characterized by the presence of a peripheral layer of hematopoietic cells around the parenchymatous tissue formed by typical hepatocytes. The antibody C36/1 labels the nuclei of both types of cells, whereas the antibody A33/22 labels the nuclei of hepatocytes but not those of the peripheral hematopoietic cells. With both these antibodies, labeling, whenever observed, is restricted to fibrillar structures in the interchromatin space, i.e., to peri- and inter-chromatin fibrils; condensed chromatin, nucleoli, and nuclear envelope are not labeled.


Subject(s)
Antibodies, Monoclonal/immunology , Liver/ultrastructure , Nuclear Proteins/metabolism , Pleurodeles/anatomy & histology , Salamandridae/anatomy & histology , Animals , Immunoenzyme Techniques , Immunohistochemistry , Microscopy, Electron , Nuclear Proteins/immunology , Ribonucleoproteins
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