Laser welding of fiber array units.

We report the results of fabricating fiber array unit (FAU) connectors using a near IR laser welding process, locking fibers in proper position on planar glass substrates and forming strong glass-to-glass bonds, followed by final assembly using lower coefficient of thermal expansion (CTE) epoxies. A thin metal film deposited on the glass substrate provides the absorption required to attain interfacial temperatures suitable for glass-to-glass bonding. This method allows the elimination of dedicated expensive V-groove plates while still maintaining very good fiber placement accuracy. The use of epoxy is minimized to simply securing macro packaging components and protecting fibers from environmental pressure, temperature, and humidity variation. The thermal expansion properties of the epoxy used were essential for the long-term FAU reliability.

Antireflective Transparent Oleophobic Surfaces by Noninteracting Cavities.

Oleophobic surfaces have been so far realized using complex microscale and nanoscale re-entrant geometries, where primary and secondary structures or overhang geometries are typically required. Here, we propose a new design to create them with noninteracting cavities. The suspension of liquid droplets relies on the mechanism of compression of air under the meniscus leading to stable composite oil-air-solid interfaces. To demonstrate the concept, we make oleophobic surfaces, with contact angle for oleic acid of about 130° (and hexadecane about 110°), using both microholes in silicon and nanoholes in glass. Thanks to the subwavelength dimensions and antireflection effect of the nanoholes, the glass substrate also shows a high degree of optical transparency with optical transmission exceeding that of the initial bare substrate. Crockmeter tests without any significant change in morphology, optical and wetting properties after more than 500 passes also confirm the high mechanical durability of the nanohole surface. The results indicate the possibility of using the proposed oleophobic surfaces for a wide range of applications, including self-cleaning transparent windows and windshields for automobiles and aircrafts.

Self-referencing a single waveguide grating sensor in a micron-sized deep flow chamber for label-free biomolecular binding assays.

In order to allow the design of increasingly sensitive label-free biosensors, compensation of environmental fluctuations is emerging as the dominant hurdle. The system and technique presented here utilize a unique combination of microfluidics, optical instrumentation, and image processing to provide a reference signal for each label-free biomolecular binding assay. Moreover, this reference signal is generated from the same sensor used to detect the biomolecular binding events. In this manner, the reference signal and the binding signal share nearly all common-mode noise sources (temperature, pressure, vibration, etc.) and their subtraction leaves the purest binding signal possible. Computational fluid dynamic simulations have been used to validate the flow behavior and thermal characteristics of the fluids inside the sensing region. This system has been demonstrated in simple bulk refractive index tests, as well as small molecule (biotin/streptavidin) binding experiments. The ability to perform not only simple binding but also control experiments has been discussed, indicating the wide applicability of the technique.

Method for detection of single-base mismatches using bimolecular beacons.

This paper describes a method for the detection of single-base mismatches using DNA microarrays in a format that does not require labeling of the sample ("target") DNA. The method is based on disrupting fluorescence energy transfer (FRET) between a fluorophore attached to an immobilized DNA strand ("probe") and a quencher-containing sequence that is complementary except for an artificial mismatch (e.g. 5-nitroindole, 3-nitropyrole, or abasic site) at the site of interrogation. As the displacement of the FRET acceptor and hybridization of the unlabeled probe are bimolecular, the term "bimolecular beacons" is used to describe this approach. The analysis of a mismatch was based on differences in the amount of disruption in FRET upon hybridization of perfectly matched DNA targets and those containing single-base mismatches. Using this method and an oligonucleotide model system, A/C single-base mismatches were successfully discriminated at levels greater than that observed using surface-immobilized molecular beacons. The amount of discrimination was dependent on the identity of the artificial mismatch; greater discrimination was observed with 5-nitroindole (a "universal" base) than with an abasic site. G/T mismatches, considered to be particularly difficult to detect, were also successfully discriminated when quencher sequences containing 5-nitroindole were used.