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1.
Z Rheumatol ; 79(4): 325-331, 2020 May.
Article in German | MEDLINE | ID: mdl-32221711

ABSTRACT

The differential diagnosis of fever, especially in the context of autoimmune diseases is broad. Accordingly, the spectrum of diagnostic procedures is extensive and the therapeutic consequences are partly contradictory. Fever is basically the manifestation of an increased cell proliferation, such as classically seen in tumors, infections or autoimmune inflammation. Systemic lupus erythematosus (SLE) is one of the most multifaceted rheumatological diseases. Fever is one component of the new classification criteria which help to classify and possibly diagnose SLE. The differential work-up of fever is a special challenge for clinicians particularly in the context of the initial diagnosis of SLE or another autoimmune disease and also in the course of the disease in patients with autoimmune diseases. Based on a case report this article discusses differential diagnostic considerations and proposes a concrete differential diagnostic procedure. The patient's history is highlighted as an extremely important source of relevant information. Without claiming completeness various factors are listed, which help to differentiate fever as a consequence of SLE activity versus fever as a consequence of an infection.


Subject(s)
Fever/etiology , Infections/diagnosis , Lupus Erythematosus, Systemic , Autoimmune Diseases , Diagnosis, Differential , Disease Progression , Humans , Lupus Erythematosus, Systemic/diagnosis
3.
Protein Expr Purif ; 5(1): 37-43, 1994 Feb.
Article in English | MEDLINE | ID: mdl-8167472

ABSTRACT

Overproduction of the extracellular Serratia marcescens nuclease in Escherichia coli results in aggregation and sequestration of a large amount of the protein in inclusion bodies. Only a relatively small amount is secreted into the medium from which it can be purified following established procedures. The cell-associated insoluble protein can be solubilized in 6 M urea after breaking up the cells by sonication. Renaturation is achieved by dilution or dialysis. Subsequent phosphocellulose chromatography yields a homogeneous protein preparation which is shown by a variety of biochemical and biophysical analyses to be indistinguishable from conventionally prepared material. The high yield (> 10 mg/500-ml culture) and the ease of preparation (2 to 3 days) make this an attractive alternative to previously described procedures.


Subject(s)
Bacterial Proteins/isolation & purification , Endodeoxyribonucleases/isolation & purification , Endoribonucleases/isolation & purification , Recombinant Fusion Proteins/isolation & purification , Serratia marcescens/enzymology , Amino Acid Sequence , Bacterial Proteins/biosynthesis , Cellulose/analogs & derivatives , Chromatography, Affinity , Endodeoxyribonucleases/biosynthesis , Endoribonucleases/biosynthesis , Escherichia coli , Protein Denaturation , Protein Folding , Recombinant Fusion Proteins/biosynthesis , Serratia marcescens/genetics , Urea
4.
Biochemistry ; 31(20): 4808-15, 1992 May 26.
Article in English | MEDLINE | ID: mdl-1591242

ABSTRACT

We have used site-directed mutagenesis of the EcoRV restriction endonuclease to change amino acid side chains that have been shown crystallographically to be in close proximity to the scissile phosphodiester bond of the DNA substrate. DNA cleavage assays of the resulting mutant proteins indicate that the largest effects on nucleolytic activity result from substitution of Asp74, Asp90, and Lys92. We suggest on the basis of structural information, mutagenesis data, and analogies with other nucleases that Asp74 and Asp90 might be involved in Mg2+ binding and/or catalysis and that Lys92 probably stabilizes the pentacovalent phosphorus in the transition state. These amino acids are part of a sequence motif, Pro-Asp...Asp/Glu-X-Lys, which is also present in EcoRI. In both enzymes, it is located in a structurally similar context near the scissile phosphodiester bond. A preliminary mutational analysis with EcoRI indicates that this sequence motif is of similar functional importance for EcoRI and EcoRV. On the basis of these results, a proposal is made for the mechanism of DNA cleavage by EcoRV and EcoRI.


Subject(s)
Amino Acids/chemistry , Deoxyribonucleases, Type II Site-Specific/chemistry , Mutagenesis, Site-Directed , Amino Acid Sequence , Amino Acids/genetics , Aspartic Acid/chemistry , Base Sequence , Binding Sites , Catalysis , DNA, Bacterial/chemistry , Deoxyribonucleases, Type II Site-Specific/genetics , Deoxyribonucleases, Type II Site-Specific/physiology , Hydrolysis , Lysine/chemistry , Molecular Sequence Data , Proline/chemistry , Structure-Activity Relationship
5.
Gene ; 89(1): 19-27, 1990 Apr 30.
Article in English | MEDLINE | ID: mdl-2142667

ABSTRACT

We have developed an assay that allows analysis of the activity of EcoRI restriction endonuclease (ENase) and its mutants in vivo. This assay is based on the fact that wild type (wt) EcoRI ENase is toxic for Escherichia coli cells not expressing the EcoRI methyltransferase (MTase). The viability factor defined by the ratio of the viable counts of E. coli cultures having or not having expressed the ecoRIR gene for a defined time is 10(-6) for wt EcoRI ENase and close to one for a totally inactive EcoRI ENase mutant. While the EcoRI MTase (M.EcoRI) provides substantial protection against the toxic effects of the wt EcoRI ENase and several of the mutants, some mutants become more toxic in the presence of M.EcoRI. Twenty-four different DNA-binding-site mutants of EcoRI ENase were characterized in their activity in vivo with this assay. The results obtained allow us to conclude that the structural integrity of the region at and around aa 200 seems to be very critical for the enzymatic function of EcoRI ENase: nonconservative replacements there lead to viability factors of 1-10(-2). While our results indicate that the region around aa 144 and 145 is also involved in the EcoRI ENase-catalyzed reaction, it is also evident that the effects of mutation there are not as large: viability factors of approx. 10(-3) are obtained even for drastic replacements. These results are discussed in the light of the x-ray structure analysis of an EcoRI ENase-DNA recognition complex.


Subject(s)
Deoxyribonuclease EcoRI/genetics , Escherichia coli/genetics , Amino Acid Sequence , Bacteriophage lambda/genetics , Binding Sites , DNA, Viral/metabolism , Deoxyribonuclease EcoRI/metabolism , Escherichia coli/enzymology , Escherichia coli/growth & development , Genetic Vectors , Models, Molecular , Molecular Sequence Data , Mutation , Plasmids , Protein Conformation , Site-Specific DNA-Methyltransferase (Adenine-Specific)/genetics , Site-Specific DNA-Methyltransferase (Adenine-Specific)/metabolism , Substrate Specificity
6.
Biochemistry ; 28(6): 2667-77, 1989 Mar 21.
Article in English | MEDLINE | ID: mdl-2499352

ABSTRACT

We have genetically engineered the Arg200----Lys mutant, the Glu144Arg145----GlnLys double mutant, and the Glu144Arg145Arg200----GlnLysLys triple mutant of the EcoRI endonuclease in extension of previously published work on site-directed mutagenesis of the EcoRI endonuclease in which Glu144 had been exchanged for Gln and Arg145 for Lys [Wolfes et al. (1986) Nucleic Acids Res. 14, 9063]. All these mutants carry modifications in the DNA binding site. Mutant EcoRI proteins were purified to homogeneity and characterized by physicochemical techniques. All mutants have a very similar secondary structure composition. However, whereas the Lys200 mutant is not impaired in its capacity to form a dimer, the Gln144Lys145 and Gln144Lys145Lys200 mutants have a very much decreased propensity to form a dimer or tetramer depending on concentration as shown by gel filtration and analytical ultracentrifugation. This finding may explain the results of isoelectric focusing experiments which show that these two mutants have a considerably more basic pI than expected for a protein in which an acidic amino acid was replaced by a neutral one. Furthermore, while wild-type EcoRI and the Lys200 mutant are denatured in an irreversible manner upon heating to 60 degrees C, the thermal denaturation process as shown by circular dichroism spectroscopy is fully reversible with the Gln144Lys145 double mutant and the Gln144Lys145Lys200 triple mutant. All EcoRI endonuclease mutants described here have a residual enzymatic activity with wild-type specificity, since Escherichia coli cells overexpressing the mutant proteins can only survive in the presence of EcoRI methylase. The detailed analysis of the enzymatic activity and specificity of the purified mutant proteins is the subject of the accompanying paper [Alves et al. (1989) Biochemistry (following paper in this issue)].


Subject(s)
DNA/metabolism , Deoxyribonuclease EcoRI/genetics , Glutamine , Lysine , Mutation , Base Sequence , Binding Sites , Deoxyribonuclease EcoRI/metabolism , Genes , Genes, Bacterial , Genetic Engineering , Genetic Vectors , Macromolecular Substances , Molecular Sequence Data , Oligonucleotide Probes , Protein Binding , Protein Conformation , Protein Denaturation , Restriction Mapping , Thermodynamics
7.
Biochemistry ; 28(6): 2678-84, 1989 Mar 21.
Article in English | MEDLINE | ID: mdl-2659077

ABSTRACT

According to the X-ray structure analysis of an EcoRI-oligodeoxynucleotide complex [McClarin et al. (1986) Science 234, 1526], sequence specificity is mediated by 12 hydrogen bonds, 6 from each of the two identical subunits of the dimeric enzyme to the recognition site -GAATTC-: Arg200 forms two hydrogen bonds with guanine, while Glu144 and Arg145 form four hydrogen bonds to adjacent adenine residues. Changing the hydrogen-bonding potential at the recognition site without perturbing the rest of the interface should lead to the recognition of degenerate sequences [Rosenberg et al. (1987) in Protein Engineering (Oxender, D. L., & Fox, C. F., Eds.) pp 237-250, Liss, New York]. We have shown previously that replacing Glu144 by Gln and Arg145 by Lys affects the activity of the enzyme, not, however, its specificity [Wolfes et al. (1986) Nucleic Acids Res. 14, 9063]. We show now that also the mutation of Arg200 to Lys, the double mutation Glu144Arg145 to GlnLys, and the triple mutation Glu144Arg145Arg200 to GlnLysLys do not lead to a detectable degeneracy of the specificity of cleavage by EcoRI but significantly impair the catalytic activity of this enzyme. A detailed analysis of the steady-state kinetics of cleavage of pUC8 DNA and a tridecadeoxynucleotide substrate demonstrates that the reduction in activity for all DNA binding site mutants investigated so far is mainly due to a decrease in kcat, with the exception of the Arg200 to Lys mutant, which is only impaired in its KM.(ABSTRACT TRUNCATED AT 250 WORDS)


Subject(s)
DNA/metabolism , Deoxyribonuclease EcoRI/metabolism , Base Sequence , Binding Sites , Deoxyribonuclease EcoRI/genetics , Escherichia coli/enzymology , Kinetics , Molecular Sequence Data , Mutation , Oligodeoxyribonucleotides/metabolism , Protein Conformation , Substrate Specificity
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