Two-dimensional phases of confined 5-cyano-biphenyl: Computer simulation study.

The properties of composites of mesogens and two-dimensional (2D) materials are of great interest due to their practical applications in flexible displays, optoelectronics, microelectronics, and novel nanodevices. The properties of such composites are very complex and strongly depend on the interactions between the host material and the mesogen filling. We have performed molecular dynamics simulations for 4-cyano-4^{'}-pentylbiphenyl embedded between graphene and hexagonal 2D boron nitride layers. The structural and dynamical properties of such systems were investigated in terms of the order parameters, density profiles, mean square displacement, and autocorrelation function of the single-molecule dipole moment. Our simulations have shown that the mesogenic molecules form highly stable ordered layered structures and that their dynamics are strongly related to the structural properties. We have investigated not only the effects of the polarization of the host material, but also the effects of the spatial repetition of such composites by using two models of mesogens embedded in 2D layers: the direct sheet and the structure formed by multiplying a single unit of the composite in the direction perpendicular to the substrate surface.

Impact of polarized nanotube surface on ultrathin mesogen film properties: Computer simulation study.

We studied properties of monolayer films of n-cyanobiphenyl (with n=5,...,8) series of mesogens anchored on the surface of single walled boron nitride nanotube. In order to assess the impact of substrate polarization on the ordering effects we compare translational and reorientational dynamics of the films with the characteristics of analogous carbon and silicon carbide nanotube based systems. We observed significant increase of the ordering degree accompanied by increased thermal stability. This ordering is less selective than those induced by the silicon carbide nanotube, which were previously reported. The antiparallel orientation of the nearest neighboring mesogens is predominant, while the system does not exhibit any long-range spatial correlations which indicates that the size of the domains is constrained to this region. These features might be of potential importance in the design of novel optoelectronic devices.

On the impact of nanotube diameter on biomembrane indentation - Computer simulations study.

The influence of the single-walled carbon nanotubes on the phospholipid bilayer has been studied using steered molecular dynamics (SMD) simulations. The impact of different nanotubes on the phospholipid bilayer structure is discussed as well as the speed of indentation. Additionally, a series of simulations with pulling out of the nanotubes from the membrane were performed. The deflection of the membrane in both nanoindenation and extraction processes is also discussed. The self-sealing ability of membrane during this process is examined. Complete degradation of the bilayer was not observed even for the most invasive nanoindentation process studied. The obtained results show that carbon nanotubes can be regarded as potential drug carriers for targeted therapy.

Properties of ultrathin cholesterol and phospholipid layers surrounding silicon-carbide nanotube: MD simulations.

Computer simulation technique was used to study the dynamics of cholesterol and POPC phospholipid molecules forming a thin layer on the surface of the carbon and silicon-carbide nanotubes. Each nanotube was surrounded by an ultra-thin film formed by n lipid molecules, where n varies from 15 to 50. All studies were done for five temperatures, including physiological one (T=260, 285, 310, 335 and 360K). The influence of a nanotube on the dynamics of cholesterol or phospholipid molecules in a layer is presented and discussed. The water is ubiquitous in all biological milieus, where the cholesterol or lipids occur. Thus, simulations were performed in a water environment. Moreover, to show different behavior of lipids in systems with water the results were compared with the samples without it. The dynamical and structural observables, such as the mean square displacement, diffusion coefficient, radial distribution function, and activation energy were calculated to qualitatively investigate the behavior of cholesterol and phospholipid molecules in the layers. We observed remarkable differences between the cholesterol dynamics depending whether the ultrathin film surrounds carbon or silicon-carbide nanotube and whether the water environment appeared.