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1.
Nanomaterials (Basel) ; 12(10)2022 May 17.
Article in English | MEDLINE | ID: mdl-35630938

ABSTRACT

During the last two decades several nanoscale materials were engineered for industrial and medical applications. Among them carbon nanotubes (CNTs) are the most exploited nanomaterials with global production of around 1000 tons/year. Besides several commercial benefits of CNTs, the fiber-like structures and their bio-persistency in lung tissues raise serious concerns about the possible adverse human health effects resembling those of asbestos fibers. In this review, we present a comparative analysis between CNTs and asbestos fibers using the following four parameters: (1) fibrous needle-like shape, (2) bio-persistent nature, (3) high surface to volume ratio and (4) capacity to adsorb toxicants/pollutants on the surface. We also compare mechanisms underlying the toxicity caused by certain diameters and lengths of CNTs and asbestos fibers using downstream pathways associated with altered gene expression data from both asbestos and CNT exposure. Our results suggest that indeed certain types of CNTs are emulating asbestos fiber as far as associated toxicity is concerned.

2.
Small ; 16(36): e2003303, 2020 09.
Article in English | MEDLINE | ID: mdl-32700469

ABSTRACT

Nanotechnologies have reached maturity and market penetration that require nano-specific changes in legislation and harmonization among legislation domains, such as the amendments to REACH for nanomaterials (NMs) which came into force in 2020. Thus, an assessment of the components and regulatory boundaries of NMs risk governance is timely, alongside related methods and tools, as part of the global efforts to optimise nanosafety and integrate it into product design processes, via Safe(r)-by-Design (SbD) concepts. This paper provides an overview of the state-of-the-art regarding risk governance of NMs and lays out the theoretical basis for the development and implementation of an effective, trustworthy and transparent risk governance framework for NMs. The proposed framework enables continuous integration of the evolving state of the science, leverages best practice from contiguous disciplines and facilitates responsive re-thinking of nanosafety governance to meet future needs. To achieve and operationalise such framework, a science-based Risk Governance Council (RGC) for NMs is being developed. The framework will provide a toolkit for independent NMs' risk governance and integrates needs and views of stakeholders. An extension of this framework to relevant advanced materials and emerging technologies is also envisaged, in view of future foundations of risk research in Europe and globally.


Subject(s)
Nanostructures , Nanotechnology , Risk Assessment , Nanostructures/toxicity , Nanotechnology/standards , Nanotechnology/trends , Risk Assessment/standards
3.
Mol Biol Rep ; 46(5): 5433-5441, 2019 Oct.
Article in English | MEDLINE | ID: mdl-31377977

ABSTRACT

Genetic factors in combination with environmental factors play a critical role in the development type 2 diabetes mellitus (T2DM) which is growing as an epidemic globally. In present study we aim to assess the association of eNOS (G894T, rs1799983) and NET (G1287A, rs5569) genes polymorphism with T2DM. A case-control study including a total of 400 North Indian subjects (200 T2DM cases and 200 controls) was performed using the polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) approach to analyze genetic polymorphism. Alleles/genotype frequencies between cases and controls were compared using χ2 and Student's t-tests. Odds ratios and 95% confidence intervals were calculated by logistic regression to assess the relative association between disease and genotypes. In case of NET gene, GG (P = 0.002 in T2DM males, 0.053 in overall T2DM cases) genotype and G allele (P = 0.003 in T2DM males, 0.027 in overall T2DM cases) were found to be a positive risk factors and AG genotype (P = 0.012 in T2DM males) and A allele (P = 0.003 in T2DM males, P = 0.027 in overall T2DM cases) as negative risk factor for T2DM. No association of eNOS gene polymorphism was found with T2DM (P values of all genotypes and alleles were greater than 0.05). NET gene polymorphism might be associated with the risk of T2DM whereas; eNOS gene polymorphism do not confer any risk of T2DM in North Indian Ethnic group. It is hoped that understanding genetic causes of T2DM will lead to earlier diagnosis, preventive measures and more effective and specific treatment.


Subject(s)
Diabetes Mellitus, Type 2/genetics , Nitric Oxide Synthase Type III/genetics , Norepinephrine Plasma Membrane Transport Proteins/genetics , Adult , Case-Control Studies , Diabetes Mellitus, Type 2/enzymology , Diabetes Mellitus, Type 2/metabolism , Female , Gene Frequency , Genetic Association Studies , Genetic Predisposition to Disease , Genotype , Humans , Male , Middle Aged , Nitric Oxide Synthase Type III/metabolism , Norepinephrine Plasma Membrane Transport Proteins/metabolism , Polymorphism, Restriction Fragment Length , Polymorphism, Single Nucleotide , Risk Factors
4.
J Comput Aided Mol Des ; 32(3): 487-496, 2018 03.
Article in English | MEDLINE | ID: mdl-29397519

ABSTRACT

Graphene-based nanomaterials (GBNMs) are widely used in various industrial and biomedical applications. GBNMs of different compositions, size and shapes are being introduced without thorough toxicity evaluation due to the unavailability of regulatory guidelines. Computational toxicity prediction methods are used by regulatory bodies to quickly assess health hazards caused by newer materials. Due to increasing demand of GBNMs in various size and functional groups in industrial and consumer based applications, rapid and reliable computational toxicity assessment methods are urgently needed. In the present work, we investigate the impact of graphene and graphene oxide nanomaterials on the structural conformations of small hepcidin peptide and compare the materials for their structural and conformational changes. Our molecular dynamics simulation studies revealed conformational changes in hepcidin due to its interaction with GBMNs, which results in a loss of its functional properties. Our results indicate that hepcidin peptide undergo severe structural deformations when superimposed on the graphene sheet in comparison to graphene oxide sheet. These observations suggest that graphene is more toxic than a graphene oxide nanosheet of similar area. Overall, this study indicates that computational methods based on structural deformation, using molecular dynamics (MD) simulations, can be used for the early evaluation of toxicity potential of novel nanomaterials.


Subject(s)
Graphite/chemistry , Hepcidins/chemistry , Molecular Dynamics Simulation , Nanostructures/chemistry , Principal Component Analysis , Protein Conformation , Structure-Activity Relationship , Surface Properties
5.
Biomarkers ; 22(8): 782-789, 2017 Dec.
Article in English | MEDLINE | ID: mdl-28602143

ABSTRACT

CONTEXT: Genetics play a major role in development and pathophysiology of Type 2 diabetes mellitus (T2DM). OBJECTIVE: To asses the association of Guanine nucleotide-binding protein (GNB3) (C825T) gene's polymorphism with T2DM. MATERIALS AND METHODS: A case-control study including 400 North Indians was performed using Polymerase Chain Reaction-Restriction Fragment Length Polymorphism (PCR-RFLP) approach to analyze genetic polymorphism. RESULTS: No significant difference was observed in genotype and allele frequencies of GNB3 gene on comparing cases with controls. DISCUSSION: Our study is in agreement with studies on Polish, Japanese, Hispanic-American and Danish populations who observed no significant association between GNB3 (C825T) polymorphism and T2DM. CONCLUSION: GNB3 (C825T) polymorphism is not associated with T2DM.


Subject(s)
Diabetes Mellitus, Type 2/genetics , Genetic Predisposition to Disease/genetics , Heterotrimeric GTP-Binding Proteins/genetics , Mutation , Alleles , Case-Control Studies , Female , Gene Frequency , Genotype , Humans , India , Male , Middle Aged , Polymorphism, Single Nucleotide , Risk Factors
6.
Asia Pac J Clin Oncol ; 13(2): e11-e20, 2017 Apr.
Article in English | MEDLINE | ID: mdl-26792652

ABSTRACT

AIM: The prevalence of genetic variants of thiopurine S-methyltransferse (TPMT) and dihydropyrimidine dehydrogenase (DPD) in healthy controls (500) and the treatment response in 500 cases of head and neck cancer of north Indian origin was studied. METHODS: Blood collected from all the subjects was used for isolation of DNA followed by genotyping studies. The cases received cisplatin and 5-fluorouracil (5-FU) or chemo-radiotherapy and treatment response was measured using WHO criteria. RESULTS: Low frequency of heterozygous mutant genotypes of TPMT*2 (2%), TPMT*3B (2.2%), TPMT*3C (4.6%), DPD IVS14+1G>A (3.6%) and G1601A (3%) was observed, although no homozygous mutants could be identified. Treatment response studies in cases receiving cisplatin and 5-FU or chemo-radiotherapy revealed that the number of nonresponders was higher in cases who carried variant genotypes of TPMT*3B (62.50%) or TPMT*3C (59.26%) or DPD IVS14+1G>A (61.90%). Likewise, the number of nonresponders was still higher in cases carrying combination of these genetic variants. Furthermore, the frequency of nonresponders was higher in cases who carried the variant genotypes of TPMT or DPD and were also tobacco users. CONCLUSIONS: Our data clearly show that TPMT and DPD genes are polymorphic in the north Indian population and may be important in determining the treatment response in cases. The data have also suggest tobacco may play an important role in determining the outcome of cancer therapy and there is an urgent need for assessment of drugs for their efficacy/toxicity in smokers compared to nonsmokers.


Subject(s)
Antineoplastic Combined Chemotherapy Protocols/pharmacokinetics , Carcinoma, Squamous Cell/genetics , Dihydrouracil Dehydrogenase (NADP)/genetics , Head and Neck Neoplasms/genetics , Methyltransferases/genetics , Antineoplastic Combined Chemotherapy Protocols/therapeutic use , Carcinoma, Squamous Cell/drug therapy , Carcinoma, Squamous Cell/enzymology , Carcinoma, Squamous Cell/radiotherapy , Case-Control Studies , Cisplatin/administration & dosage , Cisplatin/pharmacokinetics , DNA, Neoplasm/blood , DNA, Neoplasm/genetics , Dihydrouracil Dehydrogenase (NADP)/metabolism , Fluorouracil/administration & dosage , Fluorouracil/pharmacokinetics , Gene Frequency , Genotype , Head and Neck Neoplasms/drug therapy , Head and Neck Neoplasms/enzymology , Head and Neck Neoplasms/radiotherapy , Humans , India , Male , Methyltransferases/metabolism , Polymorphism, Genetic , Squamous Cell Carcinoma of Head and Neck , Treatment Outcome
7.
Bioorg Med Chem ; 25(3): 949-962, 2017 02 01.
Article in English | MEDLINE | ID: mdl-28034648

ABSTRACT

Various novel arylated estrone derivatives, such as 2-aryl-, 4-aryl- and 2,4-diaryl-estrones, by Suzuki-Miyaura reactions. While the synthesis of 4-arylestrones could be carried out under standard conditions, the synthesis of 2-arylestrones and 2,4-diarylestrones required a thorough optimization of the conditions and it proved to be important to use sterically encumbered biaryl ligands. The best results were obtained by the use of RuPhos. Combination of developed Suzuki coupling reactions with subsequent cyclization reactions afforded more complex hybrid structures, containing dibenzofuran, benzocoumarin and steroid moieties. These derivatives were tested as pancreatic lipase inhibitors and it was found that most of the compounds exhibited inhibition of pancreatic lipase but the maximum inhibitory potential was shown by 4-arylestrones. All of the synthesized derivatives showed inhibitory values in the range of 0.82±0.01-59.7±3.12µM. The biological activity was also rationalized on the bases of docking studies.


Subject(s)
Enzyme Inhibitors/pharmacology , Estrone/pharmacology , Lipase/antagonists & inhibitors , Dose-Response Relationship, Drug , Enzyme Inhibitors/chemical synthesis , Enzyme Inhibitors/chemistry , Estrone/chemical synthesis , Estrone/chemistry , Humans , Lipase/metabolism , Molecular Structure , Pancreas/enzymology , Stereoisomerism , Structure-Activity Relationship
8.
Bioorg Med Chem ; 24(21): 5115-5126, 2016 11 01.
Article in English | MEDLINE | ID: mdl-27647368

ABSTRACT

Arylated coumarins were prepared by site-selective Suzuki-Miyaura cross-coupling reaction of the bis(triflate) of 4-methyl-6,7-dihydroxycoumarin. Triarylated coumarins were prepared by Suzuki-Miyaura cross-coupling reactions of 3-bromo-4-methyl-2-oxo-2H-chromene-6,7-diylbis(trifluoromethanesulfonate). The in vitro anti-HIV activity of the products was investigated. Two lead structures with considerable activities were identified.


Subject(s)
Anti-HIV Agents/pharmacology , Coumarins/pharmacology , HIV-1/drug effects , HIV-2/drug effects , Anti-HIV Agents/chemical synthesis , Anti-HIV Agents/chemistry , Cell Line, Tumor , Coumarins/chemical synthesis , Coumarins/chemistry , Crystallography, X-Ray , Dose-Response Relationship, Drug , Humans , Microbial Sensitivity Tests , Models, Molecular , Molecular Structure , Structure-Activity Relationship
9.
Oncol Res Treat ; 39(4): 221-6, 2016.
Article in English | MEDLINE | ID: mdl-27160276

ABSTRACT

Head and neck squamous cell carcinoma (HNSCC) describes a wide range of malignant tumors which originate in the upper aerodigestive tract and have a multifactorial origin involving both genetic and lifestyle risk factors. The clinical management of head and neck cancer involves surgery, radiotherapy, and chemotherapy. With the advances in treatment strategies for HNSCC, newer targeted therapies are adding to the progress already achieved in the multimodality management of patients although the problems of differences in drug response and adverse drug reactions are still grave concerns. Cancer pharmacogenomics has fast emerged as a new and promising field for the early identification of genetic markers that can predict drug response or toxicity. This could greatly help in identifying genetic markers useful for the selection of optimal drugs, dose, and treatment duration on an individual basis resulting in improved drug efficacy and decreased toxicity. This review focuses on the various treatment modalities available for the clinical management of HNSCC followed by a description of the contribution of genetic variations to chemotherapeutic toxicity and response. Furthermore, studies addressing the association of genetic variants of drug-metabolizing enzymes with treatment response in head and neck cancer are also discussed.


Subject(s)
Carcinoma, Squamous Cell/drug therapy , Carcinoma, Squamous Cell/physiopathology , Cytochrome P450 Family 2/genetics , Glutathione Transferase/genetics , Head and Neck Neoplasms/drug therapy , Head and Neck Neoplasms/physiopathology , Pharmacogenomic Variants/genetics , Antineoplastic Agents/therapeutic use , Cytochrome P450 Family 2/metabolism , Evidence-Based Medicine , Genetic Markers/genetics , Genetic Predisposition to Disease/genetics , Glutathione Transferase/metabolism , Humans , Neoplasm Proteins/genetics , Neoplasm Proteins/metabolism , Precision Medicine/methods , Squamous Cell Carcinoma of Head and Neck , Treatment Outcome
10.
3 Biotech ; 6(2): 255, 2016 Dec.
Article in English | MEDLINE | ID: mdl-28330327

ABSTRACT

Type 2 diabetes (T2DM) is a polygenic metabolic disorder characterized by hyperglycemia occurring as a result of impaired insulin secretion or insulin resistance. Various environmental and genetic factors interact and increase the risk of T2DM and its complications. Among the various genetic factors associated with T2DM, single nucleotide polymorphism in different candidate genes have been studied intensively and the resulting genetic variants have been found to have either positive or negative association with T2DM thereby increasing or decreasing the risk of T2DM, respectively. In this review, we will focus on Guanine nucleotide-binding protein subunit beta 3 (GNB3), Norepinephrine Transporter (NET), Potassium Channel gene (KCNJ11), Transcription Factor 7-Like 2 (TCF7L2) and Glucocorticoid receptor (GRL) genes and their association with T2DM studied in different ethnic groups. The products of these genes are involved in the biochemical pathway leading to T2DM. Polymorphisms in these genes have been intensively studied in individuals of different ethnic origins. Results show that genetic variants of TCF7L2 and KCNJ11 genes have potential to emerge as a risk biomarker for T2DM whereas results of GNB3, GRL and NET genes have been controversial when studied in individuals of different ethnicities. We have tried to summarize the results generated globally in context to the selected genes which could possibly help researchers working in this field and would eventually help in understanding the mechanistic pathways of T2DM leading early diagnosis and prevention.

11.
PLoS One ; 9(9): e107068, 2014.
Article in English | MEDLINE | ID: mdl-25215666

ABSTRACT

Polycyclic aromatic hydrocarbons (PAH), like Benzo[alpha]Pyrene (BaP) are known to cause a number of toxic manifestations including lung cancer. As Titanium dioxide Nanoparticles (TiO2 NPs) have recently been shown to adsorb a number of PAHs from soil and water, we investigated whether TiO2 NPs could provide protection against the BaP induced toxicity in biological system. A549 cells when co-exposed with BaP (25 µM, 50 µM and 75 µM) along with 0.1 µg/ml,0.5 µg/ml and 1 µg/ml of TiO2 NPs, showed significant reduction in the toxic effects of BaP, as measured by Micronucleus Assay, MTT Assay and ROS Assay. In order to explore the mechanism of protection by TiO2 NP against BaP, we performed in silico studies. BaP and other PAHs are known to enter the cell via aromatic hydrocarbon receptor (AHR). TiO2 NP showed a much higher docking score with AHR (12074) as compared to the docking score of BaP with AHR (4600). This indicates a preferential binding of TiO2 NP with the AHR, in case if both the TiO2 NP and BaP are present. Further, we have done the docking of BaP with the TiO2 NP bound AHR-complex (score 4710), and observed that BaP showed strong adsorption on TiO2 NP itself, and not at its original binding site (at AHR). TiO2 NPs thereby prevent the entry of BaP in to the cell via AHR and hence protect cells against the deleterious effects induced by BaP.


Subject(s)
Benzo(a)pyrene/toxicity , Carcinogens, Environmental/toxicity , Nanoparticles/chemistry , Titanium/pharmacology , Binding Sites , Cell Death/drug effects , Cell Line, Tumor , Cell Survival/drug effects , Computer Simulation , Endocytosis/drug effects , Humans , Micronucleus Tests , Molecular Docking Simulation , Oxidative Stress/drug effects , Reactive Oxygen Species/metabolism , Receptors, Aryl Hydrocarbon/chemistry , Receptors, Aryl Hydrocarbon/metabolism , Reproducibility of Results , Software
12.
Environ Health ; 11 Suppl 1: S13, 2012 Jun 28.
Article in English | MEDLINE | ID: mdl-22759495

ABSTRACT

Nanoparticles (NPs) cause concern for health and safety as their impact on the environment and humans is not known. Relatively few studies have investigated the toxicological and environmental effects of exposure to naturally occurring NPs (NNPs) and man-made or engineered NPs (ENPs) that are known to have a wide variety of effects once taken up into an organism. A review of recent knowledge (between 2000-2010) on NP sources, and their behaviour, exposure and effects on the environment and humans was performed. An integrated approach was used to comprise available scientific information within an interdisciplinary logical framework, to identify knowledge gaps and to describe environment and health linkages for NNPs and ENPs. The causal diagram has been developed as a method to handle the complexity of issues on NP safety, from their exposure to the effects on the environment and health. It gives an overview of available scientific information starting with common sources of NPs and their interactions with various environmental processes that may pose threats to both human health and the environment. Effects of NNPs on dust cloud formation and decrease in sunlight intensity were found to be important environmental changes with direct and indirect implication in various human health problems. NNPs and ENPs exposure and their accumulation in biological matrices such as microbiota, plants and humans may result in various adverse effects. The impact of some NPs on human health by ROS generation was found to be one of the major causes to develop various diseases. A proposed cause-effects diagram for NPs is designed considering both NNPs and ENPs. It represents a valuable information package and user-friendly tool for various stakeholders including students, researchers and policy makers, to better understand and communicate on issues related to NPs.


Subject(s)
Computer Graphics , Data Interpretation, Statistical , Environmental Exposure , Nanoparticles/toxicity , Humans , Risk Assessment
13.
Toxicol Sci ; 126(1): 173-82, 2012 Mar.
Article in English | MEDLINE | ID: mdl-22262566

ABSTRACT

The specific properties of nanoscale particles, large surface-to-mass ratios and highly reactive surfaces, have increased their commercial application in many fields. However, the same properties are also important for the interaction and bioaccumulation of the nonbiodegradable nanoscale particles in a biological system and are a cause for concern. Hematite (α-Fe2O3), being a mineral form of Fe(III) oxide, is one of the most used iron oxides besides magnetite. The aim of our study was the characterization and comparison of biophysical reactivity and toxicological effects of α-Fe2O3 nano- (d < 100 nm) and microscale (d < 5 µm) particles in human lung cells. Our study demonstrates that the surface reactivity of nanoscale α-Fe2O3 differs from that of microscale particles with respect to the state of agglomeration, radical formation potential, and cellular toxicity. The presence of proteins in culture medium and agglomeration were found to affect the catalytic properties of the hematite nano- and microscale particles. Both the nano- and microscale α-Fe2O3 particles were actively taken up by human lung cells in vitro, although they were not found in the nuclei and mitochondria. Significant genotoxic effects were only found at very high particle concentrations (> 50 µg/ml). The nanoscale particles were slightly more potent in causing cyto- and genotoxicity as compared with their microscale counterparts. Both types of particles induced intracellular generation of reactive oxygen species. This study underlines that α-Fe2O3 nanoscale particles trigger different toxicological reaction pathways than microscale particles. However, the immediate environment of the particles (biomolecules, physiological properties of medium) modulates their toxicity on the basis of agglomeration rather than their actual size.


Subject(s)
Bronchi/drug effects , Ferric Compounds/toxicity , Metal Nanoparticles/toxicity , Bronchi/metabolism , Bronchi/ultrastructure , Cell Line, Transformed , Cell Survival/drug effects , Chemical Phenomena , Comet Assay , DNA Damage , Electron Spin Resonance Spectroscopy , Endocytosis , Epithelial Cells/drug effects , Epithelial Cells/metabolism , Epithelial Cells/ultrastructure , Ferric Compounds/chemistry , Fibroblasts/drug effects , Fibroblasts/metabolism , Fibroblasts/ultrastructure , Humans , Membrane Potential, Mitochondrial/drug effects , Metal Nanoparticles/chemistry , Metal Nanoparticles/ultrastructure , Microscopy, Electron, Scanning , Microscopy, Electron, Transmission , Particle Size , Reactive Oxygen Species/metabolism , Solubility , Surface Properties
14.
PLoS One ; 6(9): e25767, 2011.
Article in English | MEDLINE | ID: mdl-21980536

ABSTRACT

We study the ameliorative potential of dimetylthiourea (DMTU), an OH• radical trapper and N-acetylcysteine (NAC), a glutathione precursor/H2O2 scavenger against titanium dioxide nanoparticles (TiO2-NPs) and multi-walled carbon nanotubes (MWCNTs) induced cyto-genotoxicity in cultured human lung cancer cells-A549. Cytogenotoxicity was induced by exposing the cells to selected concentrations (10 and 50 µg/ml) of either of TiO2-NPs or MWCNTs for 24 h. Anti-cytogenotoxicity effects of DMTU and NAC were studied in two groups, i.e., treatment of 30 minutes prior to toxic insult (short term exposure), while the other group received DMTU and NAC treatment during nanoparticles exposure, i.e., 24 h (long term exposure). Investigations were carried out for cell viability, generation of reactive oxygen species (ROS), micronuclei (MN), and expression of markers of oxidative stress (HSP27, CYP2E1), genotoxicity (P5³) and CYP2E1 dependent n- nitrosodimethylamine-demethylase (NDMA-d) activity. In general, the treatment of both DMTU and NAC was found to be effective significantly against TiO2-NPs and MWCNTs induced cytogenotoxicity in A549 cells. Long-term treatment of DMTU and NAC during toxic insults has shown better prevention than short-term pretreatment. Although, cells responded significantly to both DMTU and NAC, but responses were chemical specific. In part, TiO2-NPs induced toxic responses were mediated through OH• radicals generation and reduction in the antioxidant defense system. While in the case of MWCNTs, adverse effects were primarily due to altering/hampering the enzymatic antioxidant system. Data indicate the applicability of human lung cancer cells-A549 as a pre-screening tool to identify the target specific prophylactic and therapeutic potential of drugs candidate molecules against nanoparticles induced cellular damages.


Subject(s)
Acetylcysteine/pharmacology , Cytoprotection/drug effects , Cytotoxins/toxicity , Lung Neoplasms/pathology , Mutagens/toxicity , Nanoparticles/toxicity , Thiourea/analogs & derivatives , Cell Line, Tumor , Cell Survival/drug effects , Cytochrome P-450 CYP2E1/metabolism , Cytokinesis/drug effects , Cytokinesis/genetics , Free Radical Scavengers/pharmacology , Humans , Micronucleus Tests , Nanotubes, Carbon/toxicity , Reactive Oxygen Species/metabolism , Thiourea/pharmacology , Titanium/chemistry , Titanium/toxicity
15.
J Biomed Nanotechnol ; 7(1): 183-5, 2011 Feb.
Article in English | MEDLINE | ID: mdl-21485862

ABSTRACT

Mechanosensitive ion channel transduce physical stresses to cells by the response of electro-chemicals exchange. The purpose of this study was to improve understanding of ion channel inhibition process by SWCNTs. PatchDock and FireDock results suggest that the SWCNTs interact with the extracellular domain of the ion channels. SWCNTs can be considered as the new class of ion channel inhibitors.


Subject(s)
Extracellular Fluid/chemistry , Ion Channel Gating , Lipid Bilayers/chemistry , Mechanotransduction, Cellular , Models, Biological , Models, Chemical , Nanotubes, Carbon/chemistry , Animals , Computer Simulation , Humans , Protein Structure, Tertiary
16.
Infect Genet Evol ; 11(5): 1072-82, 2011 Jul.
Article in English | MEDLINE | ID: mdl-21463714

ABSTRACT

Antigenic drift causes number of mutations in neuraminidase protein of H1N1 swine influenza virus. We analyzed neuraminidase mutations in H1N1 strains distributed over six continents, at both the sequence and structural level. Mutations in the nearby residues of the drug binding site play crucial role in the binding affinity of the drug with the protein. For this purpose, mutant models were generated for the neuraminidase protein from 34 pandemic H1N1 isolates and docking were performed with zanamivir drug. Multiple sequence alignment (MSA) and variations in docking score suggest that there are considerable changes in the binding affinity of neuraminidase with zanamivir, which leads to probable ineffectiveness of zanamivir in the isolated samples of pandemic H1N1 collected from quite a few countries. To further evaluate the effectiveness of the antiviral drugs, we derived, calibrated and analyzed an ordinary differential equations based mathematical model for H1N1 infection dynamics and drug mediated virus deactivation.


Subject(s)
Computer Simulation , Influenza A Virus, H1N1 Subtype , Influenza, Human/virology , Models, Biological , Neuraminidase/antagonists & inhibitors , Zanamivir/pharmacology , Antigens, Viral/genetics , Antiviral Agents/pharmacology , Genetic Drift , Humans , Influenza, Human/drug therapy , Phylogeny
17.
Nanotoxicology ; 5(2): 195-207, 2011 Jun.
Article in English | MEDLINE | ID: mdl-20804439

ABSTRACT

Multi-walled carbon-nanotubes (MWCNTs)-induced apoptotic changes were studied in human lung epithelium cell line-A549. Non-cytotoxic doses of MWCNTs were identified using tetrazolium bromide salt (MTT) and lactate dehydrogenase (LDH) release assays. Cells were exposed to MWCNTs (0.5-100 µg/ml) for 6-72 h. Internalization and characterization of CNTs was performed by electron microscopy. Apoptotic changes were estimated by nuclear condensation, DNA laddering, and confirmed by expression of associated markers: p(53), p(21WAF1/CIP1), Bax, Bcl(2) and activated caspase-3. MWCNTs induced the production of reactive oxygen species and malondialdehyde along with significant decrease in the activity of catalase and glutathione. MWCNTs-induced ROS generation was found not to be associated with the mitochondrial activity. In general, the changes were significant at 10 and 50 µg/ml only. Results indicate the involvement of oxidative stress and apoptosis in A549 cells exposed to MWCNTs. Our studies provide insights of the mechanisms involved in MWCNTs-induced apoptosis at cellular level.


Subject(s)
Apoptosis/drug effects , Cell Line, Tumor/drug effects , Nanotubes, Carbon/adverse effects , Oxidative Stress/drug effects , Animals , Biomarkers/metabolism , Humans , Lung Neoplasms , Mitochondria/metabolism , Nanotubes, Carbon/ultrastructure , Reactive Oxygen Species/metabolism , Rotenone/metabolism , Uncoupling Agents/metabolism
18.
Vaccine ; 28(43): 7092-7, 2010 Oct 08.
Article in English | MEDLINE | ID: mdl-20716448

ABSTRACT

Neisseria meningitidis, an exclusive human pathogen, is a major cause of mortality due to meningococcal meningitis and sepsis in many developing countries. Three meningococcal serogroup B proteins, i.e. T-cell stimulating protein A (TspA), autotransporter A (AutA), and IgA-specific serine endopeptidase (IGA1) elicits CD4+ T-cell response and may enhance the effectiveness of meningococcal vaccines by acting as protective immunogens. A very limited data on T-helper cell epitopes in MenB proteins is available. Hence, in silico prediction of peptide sequences which may act as helper T lymphocyte epitopes in MenB proteins was carried out by NetMHCIIpan web server. HLA distribution analysis was done by using the population coverage tool of Immune Epitope Database to determine the fraction of individuals in various populations expected to respond to a given set of predicted T-cell epitopes based on HLA genotype frequencies. Six epitopic core sequences, two from each MenB proteins, i.e. AutA, TspA and IgA1 protease were predicted to associate with a large number of HLA-DR alleles. These six peptides may act as T-cell epitope in more than 95% of populations in 8 out of 12 populations considered. The T-cell stimulation potential of these predicted peptides containing the core epitopic sequences is to be validated by using laboratory experiments for their efficient use as peptide vaccine candidates against N. meningitidis serogroup B.


Subject(s)
Epitopes, T-Lymphocyte/immunology , HLA-DR Antigens/immunology , Neisseria meningitidis, Serogroup B/immunology , Algorithms , Antigens, Bacterial/immunology , Bacterial Proteins/immunology , Carrier Proteins/immunology , Computational Biology , Databases, Protein , Humans , Neural Networks, Computer , Serine Endopeptidases/immunology
19.
Toxicol Ind Health ; 26(9): 575-82, 2010 Oct.
Article in English | MEDLINE | ID: mdl-20554628

ABSTRACT

The present investigations correlate the potentials of the reactive oxygen species (ROS) generation and the cyto-genotoxicity of amphibole asbestos fibers (amosite, crocidolite and tremolite) with their surface iron, under in vitro controlled conditions, using A549 cells (human lung epithelial cell line). The mobilizable surface iron was measured by Atomic Absorption Spectroscopy; the production of ROS was investigated using 2, 7 dichloro-dihydrofluorescein-diacetate (DCFH-DA) dye; for cytotoxicity assessment, the intracellular organelles specific damages were measured, using 3-(4, 5 dimethylthiazol-2-yl)-2, 5-diphenyltetrazolium bromide salt (MTT) assay; and, the genotoxic potential of amphibole fibers was determined by cytokinesis block micronucleus (CBMN) assay. In the study, highest amount of ROS was generated by crocidolite followed by tremolite and minimum with amosite. In MTT assay, the time- and concentration-dependent decrease in percent cell viability was recorded with all the three amphibole fibers, tremolite being most cytotoxic, followed by crocidolite, and then amosite. In genotoxicity assay, an increase in the frequency of micronuclei (MNi) in binucleated (BN) cells was observed, where crocidolite was most genotoxic, followed by tremolite, and amosite the least.The comparison of results depicts a clear trend of cyto-genotoxic potential paralleling the ROS generation, suggesting a definite role of oxidative stress in fiber-induced toxicity. However, amosite contains maximum surface iron (28%), followed by crocidolite (27%), and tremolite carrying least (as contaminant) or no iron, the mobilizable surface iron is maximum in crocidolite followed by amosite and is minimum in tremolite. The mobilizable iron somewhat corresponds with the ROS generation capacity of these fibers. This shows that the surface iron could be mainly responsible for amphibole asbestos-induced ROS toxicity; though it may not be the only factor responsible, other factors like shape and size etc., also play role in amphibole asbestos-induced toxicity.


Subject(s)
Asbestos, Amphibole/toxicity , Iron/chemistry , Lung/drug effects , Micronuclei, Chromosome-Defective/chemically induced , Reactive Oxygen Species/metabolism , Analysis of Variance , Asbestos, Amphibole/chemistry , Cell Line, Tumor , Cell Survival/drug effects , Epithelial Cells/drug effects , Epithelial Cells/metabolism , Humans , Lung/metabolism , Micronucleus Tests , Spectrophotometry, Atomic
20.
Environ Health Perspect ; 118(10): 1363-9, 2010 Oct.
Article in English | MEDLINE | ID: mdl-20457553

ABSTRACT

BACKGROUND: Nanomaterials are extensively used in industry and daily life, but little is known about possible health effects. An intensified research regarding toxicity of nanomaterials is urgently needed. Several studies have demonstrated that nanoparticles (NPs; diameter < 100 nm) can be transported to the central nervous system; however, interference of NPs with the electrical activity of neurons has not yet been shown. OBJECTIVES/METHODS: We investigated the acute electrophysiological effects of carbon black (CB), hematite (Fe2O3), and titanium dioxide (TiO2) NPs in primary murine cortical networks on microelectrode array (MEA) neurochips. Uptake of NPs was studied by transmission electron microscopy (TEM), and intracellular formation of reactive oxygen species (ROS) was studied by flow cytometry. RESULTS: The multiparametric assessment of electrical activity changes caused by the NPs revealed an NP-specific and concentration-dependent inhibition of the firing patterns. The number of action potentials and the frequency of their patterns (spike and burst rates) showed a significant particle-dependent decrease and significant differences in potency. Further, we detected the uptake of CB, Fe2O3, and TiO2 into glial cells and neurons by TEM. Additionally, 24 hr exposure to TiO2 NPs caused intracellular formation of ROS in neuronal and glial cells, whereas exposure to CB and Fe2O3 NPs up to a concentration of 10 µg/cm2 did not induce significant changes in free radical levels. CONCLUSION: NPs at low particle concentrations are able to exhibit a neurotoxic effect by disturbing the electrical activity of neuronal networks, but the underlying mechanisms depend on the particle type.


Subject(s)
Microelectrodes , Nanoparticles , Nerve Net , Action Potentials , Animals , Mice , Microscopy, Electron, Transmission
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