ABSTRACT
The protein encoding zone of Mitochondrial DNA region (inherited from single lineage) seems most suitable and effective for taxonomic, systematic, ecological, evolutionary, DNA barcoding, cryptic species and population studies, exploiting nucleotide/amino acid datasets (1D/2D/3D conformational level). Nowadays, expeditious computerized methods are in trend for analyzing genetic material to demonstrate variations at various levels of protein structures. Structural proteomics have implemented here for genetic identification, differentiation and relationship of species from information rich data of mt COI gene of the family Diplostomidae with inclusion of molecular tools. Various aspects have been utilized herein for re-validation and infallible discrimination of Trematode diplostomoid metacercariae (Tetracotyle lucknowensis Pandey, 1971; T. xenentodoni Chakrabarti, 1970; T. fausti Rai and Pande, 1969; T. muscularius Chakrabarti, 1970 and Diplostomulum minutum Pandey, 1968), the infective stage in the life cycle, causing severe damage to fish host, whose adults are found mainly in fish eating birds and mammals.
Subject(s)
Helminth Proteins/chemistry , Trematoda/genetics , Amino Acid Sequence , Amino Acids/analysis , Animals , Cyclooxygenase 1/genetics , DNA, Mitochondrial/chemistry , Fish Diseases/parasitology , Fishes , Helminth Proteins/genetics , Imaging, Three-Dimensional , Metacercariae/chemistry , Metacercariae/classification , Metacercariae/genetics , Mitochondria/enzymology , Models, Biological , Models, Structural , Molecular Conformation , Phylogeny , Protein Conformation , Proteomics , Trematoda/chemistry , Trematoda/classification , Trematode Infections/parasitology , Trematode Infections/veterinaryABSTRACT
Sperata aor commonly called as long- whiskered cat fish or "Bada Tengan" in local fish markets harboured one new and one previously known species of genus Thaparocleidus Jain, 1952, along with two species of Cornudiscoides Kulkarni, 1969, infesting gills. Thaparocleidus aori (Rizvi, 1971) Lim, 1996, was earlier described by Rizvi therefore was briefly recorded in the present study, except the egg. The newly found species Thaparocleidus susanae n.sp was characterized by the structure of its peculiar copulatory organ. Phylogenetic relationship of the two species under study, along with 14, reterived from GenBank was established using the sequences of 28S rDNA region (Dactylogyrus Diesing, 1850 taken as an out group).
