ABSTRACT
BACKGROUND: In the context of the Covid-19 pandemic and following the increasing number of suspicious Covid-19 cases in Madagascar, Malagasy laboratories are overflowed mainly due to lack of human resource and available material restriction. The development and validation of rapid and easy-to-perform diagnostic methods are worth of interest and high priority. The aim of this prospective study was to evaluate the performances of a rapid immunochromatographic test for the detection of SARS-CoV-2 antigen, in comparison to Reverse transcription polymerase chain reaction (RT-PCR). METHODS: The fluorescence immunochromatographic SARS-CoV-2 antigen test StandardTM Q COVID-19 Ag Test (SD Biosensor Republic Korea) was evaluated in samples derived from patients who were examined for disease categories. Diagnostic accuracy was determined in comparison to SARS-CoV-2 RT-PCR considered as gold standard. RESULTS: A total of 200 samples were included; 94 were RT-PCR positive. Median patients' age was 38.36 years, 63.5 % were male. Overall sensitivity and specificity of the Standard TM Q COVID-19 Ag (SD Biosensor® Republic Korea) were 62.66 % and 100 %, the sensitivity was significantly higher (100 %) in samples with high viral loads (Ct<29). CONCLUSIONS: This antigen-based immunofluorescence RDT could be the potential to become an important tool for the early diagnosis of SARS-CoV-2 particularly in situations with limited access to molecular methods particularly in rural area of Madagascar.
Subject(s)
COVID-19 , SARS-CoV-2 , Adult , Antigens, Viral , Humans , Male , Pandemics , Prospective Studies , Sensitivity and SpecificityABSTRACT
Two cases of meningitis caused by Streptococcus suis occurred in Madagascar, 1 in 2015 and 1 in 2016. We report the characterization of the novel sequence type, 834, which carried the mrp+/sly+/epf+ virulence marker and a mutation GâT at position 174, leading to a substitution mutS1 to mutS284.
Subject(s)
Streptococcal Infections/microbiology , Streptococcus suis/genetics , Streptococcus suis/isolation & purification , Adult , Animals , Female , Genotype , Humans , Madagascar/epidemiology , Male , Meat , Meningitis, Bacterial/epidemiology , Meningitis, Bacterial/microbiology , Middle Aged , Streptococcal Infections/epidemiology , Swine , Young Adult , ZoonosesABSTRACT
The resurgence of invasive meningococcal disease caused by Neisseria meningitidis serogroup W with sequence type ST-11 (cc11) was observed in Madagascar in 2015-2016. Three cases were investigated in this study. Molecular characterization of the strains suggests the local transmission of a single genotype that may have been circulating for years.
