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Appl Environ Microbiol ; 63(10): 4001-4, 1997 Oct.
Article in English | MEDLINE | ID: mdl-9327564

ABSTRACT

DNA reassociation was used to estimate GC content, size, and complexity of the nuclear genomes of Colletotrichum from maize and sorghum. Melting-temperature analysis indicated that the GC content of the maize pathotype DNA was 51% and that the GC content of the sorghum pathotype was 52%. DNA reassociation kinetics employing S1 nuclease digestion and an appropriately modified second-order equation indicated that the genome sizes of the maize and sorghum pathotypes were 4.8 x 10(7) bp, and 5.0 x 10(7) bp, respectively. Genomic reconstruction experiments based on Southern blot hybridization between a cloned single-copy gene, PYR1 (orotate phosphoribosyl transferase), and maize-pathotype DNA confirmed the size of the nuclear genome. The single-copy component of the genomes of both pathotypes was estimated at about 90%. For both pathotypes, ca. 7% of the genome represented repetitive DNA, and 2 to 3% was foldback DNA.


Subject(s)
Genome, Fungal , Mitosporic Fungi/genetics , Base Composition , DNA, Fungal/chemistry , DNA, Fungal/genetics , Edible Grain/microbiology , Genes, Fungal , Kinetics , Mitosporic Fungi/enzymology , Mitosporic Fungi/isolation & purification , Nucleic Acid Renaturation , Orotate Phosphoribosyltransferase/genetics , Thermodynamics , Zea mays/microbiology
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