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1.
Pathol Res Pract ; 261: 155480, 2024 Sep.
Article in English | MEDLINE | ID: mdl-39088874

ABSTRACT

Cutaneous fungal infections are one of the most common skin conditions, hence, the burden of determining fungal elements upon microscopic examination with periodic acid-Schiff (PAS) and Gomori methenamine silver (GMS) stains, is very time consuming. Despite some morphological variability posing challenges to training artificial intelligence (AI)-based solutions, these structures are favored potential targets, enabling the recruitment of promising AI-based technologies. Herein, we present a novel AI solution for identifying skin fungal infections, potentially providing a decision support system for pathologists. Skin biopsies of patients diagnosed with a cutaneous fungal infection at the Sheba Medical Center, Israel between 2014 and 2023, were used. Samples were stained with PAS and GMS and digitized by the Philips IntelliSite scanner. DeePathology® STUDIO fungal elements were annotated and deemed as ground truth data after an overall revision by two specialist pathologists. Subsequently, they were used to create an AI-based solution, which has been further validated in other regions of interests. The study participants were divided into two cohorts. In the first cohort, the overall sensitivity of the algorithm was 0.8, specificity 0.97, F1 score 0.78; in the second, the overall sensitivity of the algorithm was 0.93, specificity 0.99, F1 score 0.95. The results obtained are encouraging as proof of concept for an AI-based fungi detection algorithm. DeePathology® STUDIO can be employed as a decision support system for pathologists when diagnosing a cutaneous fungal infection using PAS and GMS stains, thereby, saving time and money.


Subject(s)
Artificial Intelligence , Dermatomycoses , Humans , Dermatomycoses/diagnosis , Dermatomycoses/microbiology , Dermatomycoses/pathology , Decision Support Systems, Clinical , Female , Biopsy
2.
Br J Haematol ; 184(4): 497-507, 2019 02.
Article in English | MEDLINE | ID: mdl-30592023

ABSTRACT

Benign neutropenia, observed in different ethnic groups, is the most common form of neutropenia worldwide. A specific single nucleotide polymorphism, rs2814778, located at the promoter of the ACKR1 (previously termed DARC) gene, which disrupts a binding site for the GATA1 erythroid transcription factor, resulting in a ACKR1-null phenotype, was found to serve as a predictor of low white blood cell and neutrophil counts in African-Americans and Yemenite Jews. Individuals with benign neutropenia due to the ACKR1-null allele have been found to have an increased susceptibility to human immunodeficiency virus infection and, on the other hand, a protective effect against malaria. The associated protective effect may explain the spread of the ACKR1-null allele by natural selection. The reviewed relationships between ACKR1 polymorphism and various pathological states may have important clinical implications to individuals with and without benign neutropenia. Potential mechanisms for ACKR1 (previously termed DARC) modulation during neutrophil recruitment to inflammation, and chemokine bioavailability in the circulation and in local tissue are reviewed and discussed.


Subject(s)
Duffy Blood-Group System , GATA1 Transcription Factor , Neutropenia , Polymorphism, Single Nucleotide , Receptors, Cell Surface , Response Elements/immunology , Duffy Blood-Group System/genetics , Duffy Blood-Group System/immunology , GATA1 Transcription Factor/genetics , GATA1 Transcription Factor/immunology , Genetic Predisposition to Disease , HIV Infections/genetics , HIV Infections/immunology , HIV Infections/pathology , HIV-1/immunology , Humans , Malaria/genetics , Malaria/immunology , Malaria/pathology , Neutropenia/genetics , Neutropenia/immunology , Neutropenia/pathology , Neutrophils/immunology , Neutrophils/pathology , Receptors, Cell Surface/genetics , Receptors, Cell Surface/immunology
3.
Harefuah ; 155(11): 650-652, 2016 Nov.
Article in Hebrew | MEDLINE | ID: mdl-28530064

ABSTRACT

INTRODUCTION: Short text: Click here for article written by Naama Rappoport, Neta Gotlieb, Olga Feld, Avi Livneh HAREFUAH 2016: 155: November: 637-641.


Subject(s)
Anti-Infective Agents/therapeutic use , Antibiotic Prophylaxis , Colonoscopy , Endocarditis, Bacterial/prevention & control , Endocarditis , Humans , United States
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