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1.
Mamm Genome ; 11(11): 1006-15, 2000 Nov.
Article in English | MEDLINE | ID: mdl-11063258

ABSTRACT

Huntingtin-interacting protein I (HIP1) is a membrane-associated protein that interacts with huntingtin, the protein altered in Huntington disease. HIP1 shows homology to Sla2p, a protein essential for the assembly and function of the cytoskeleton and endocytosis in Saccharomyces cerevisiae. We have determined that the HIP1 gene comprises 32 exons spanning approximately 215 kb of genomic DNA and gives rise to two alternate splice forms termed HIP1-1 and HIP1-2. Additionally, we have identified a novel protein termed HIP12 with significant sequence and biochemical similarities to HIP1 and high sequence similarity to Sla2p. HIP12 differs from HIP1 in its pattern of expression both at the mRNA and protein level. However, HIP1 and HIP12 are both found within the brain and show a similar subcellular distribution pattern. In contrast to HIP1, which is toxic in cell culture, HIP12 does not confer toxicity in the same assay systems. Interestingly, HIP12 does not interact with huntingtin but can interact with HIP1. suggesting a potential interaction in vivo that may influence the function of each respective protein.


Subject(s)
Caenorhabditis elegans Proteins , Carrier Proteins/genetics , DNA-Binding Proteins , Nerve Tissue Proteins/metabolism , Nuclear Proteins/metabolism , Saccharomyces cerevisiae Proteins , Alternative Splicing , Amino Acid Sequence , Base Sequence , Brain/metabolism , Carrier Proteins/metabolism , Caspase 3 , Caspases/metabolism , Cell Line , Cytoskeletal Proteins/genetics , Cytoskeletal Proteins/metabolism , Fungal Proteins/genetics , Helminth Proteins/genetics , Humans , Huntingtin Protein , Kidney/cytology , Kidney/embryology , Kidney/metabolism , Molecular Sequence Data , Multigene Family , Neurons/metabolism , Organ Specificity , Sequence Homology, Amino Acid , Stem Cells/metabolism , Two-Hybrid System Techniques
3.
Cell Death Differ ; 6(4): 362-9, 1999 Apr.
Article in English | MEDLINE | ID: mdl-10381624

ABSTRACT

Members of the caspase family of cysteine proteases are known to be key mediators of mammalian inflammation and apoptosis. To better understand the catalytic properties of these enzymes, and to facilitate the identification of selective inhibitors, we have systematically purified and biochemically characterized ten homologues of human origin (caspases 1 - 10). The method used for production of most of these enzymes involves folding of active enzymes from their constituent subunits which are expressed separately in E. coli, followed by ion exchange chromatography. In cases where it was not possible to use this method (caspase-6 and -10), the enzymes were instead expressed as soluble proteins in E. coli, and partially purified by ion exchange chromatography. Based on the optimal tetrapeptide recognition motif for each enzyme, substrates with the general structure Ac-XEXD-AMC were used to develop continuous fluorometric assays. In some cases, enzymes with virtually identical tetrapeptide specificities have kcat/Km values for fluorogenic substrates that differ by more than 1000-fold. Using these assays, we have investigated the effects of a variety of environmental factors (e.g. pH, NaCl, Ca2+) on the activities of these enzymes. Some of these variables have a profound effect on the rate of catalysis, a finding that may have important biological implications.


Subject(s)
Apoptosis/immunology , Caspases/isolation & purification , Caspases/metabolism , Calcium/pharmacology , Caspase 1/metabolism , Caspases/genetics , Catalytic Domain , Coumarins/pharmacology , Cysteine Proteinase Inhibitors/pharmacology , Endopeptidases/metabolism , Enzyme Activation/drug effects , Escherichia coli , Fluorometry , Gene Expression Regulation, Enzymologic/immunology , Humans , Hydrogen-Ion Concentration , Inflammation , Interferon-gamma/metabolism , Interleukin-1/metabolism , Interleukin-18/metabolism , Kinetics , Multigene Family/physiology , Oligopeptides/pharmacology , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Salts/pharmacology
4.
EMBO J ; 18(8): 2049-56, 1999 Apr 15.
Article in English | MEDLINE | ID: mdl-10205159

ABSTRACT

The activation of caspases represents a critical step in the pathways leading to the biochemical and morphological changes that underlie apoptosis. Multiple pathways leading to caspase activation appear to exist and vary depending on the death-inducing stimulus. We demonstrate that the activation of caspase-3, in Jurkat cells stimulated to undergo apoptosis by a Fas-independent pathway, is catalyzed by caspase-6. Caspase-6 was found to co-purify with caspase-3 as part of a multiprotein activation complex from extracts of camptothecin-treated Jurkat cells. A biochemical analysis of the protein constituents of the activation complex showed that Hsp60 was also present. Furthermore, an interaction between Hsp60 and caspase-3 could be demonstrated by co-immunoprecipitation experiments using HeLa as well as Jurkat cell extracts. Using a reconstituted in vitro system, Hsp60 was able to substantially accelerate the maturation of procaspase-3 by different upstream activator caspases and this effect was dependent on ATP hydrolysis. We propose that the ATP-dependent 'foldase' activity of Hsp60 improves the vulnerability of pro-caspase-3 to proteolytic maturation by upstream caspases and that this represents an important regulatory event in apoptotic cell death.


Subject(s)
Apoptosis , Caspases/metabolism , Chaperonin 60/metabolism , Enzyme Precursors/metabolism , Amino Acid Sequence , Caspase 3 , Caspases/isolation & purification , Chromatography, Ion Exchange , Enzyme Activation , Enzyme Precursors/isolation & purification , HeLa Cells , Humans , Jurkat Cells , Molecular Sequence Data , Protein Processing, Post-Translational , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Spectrophotometry, Ultraviolet
5.
J Biol Chem ; 273(15): 9158-67, 1998 Apr 10.
Article in English | MEDLINE | ID: mdl-9535906

ABSTRACT

The neurodegenerative diseases Huntington disease, dentatorubropallidoluysian atrophy, spinocerebellar atrophy type 3, and spinal bulbar muscular atrophy are caused by expansion of a polyglutamine tract within their respective gene products. There is increasing evidence that generation of truncated proteins containing an expanded polyglutamine tract may be a key step in the pathogenesis of these disorders. We now report that, similar to huntingtin, atrophin-1, ataxin-3, and the androgen receptor are cleaved in apoptotic extracts. Furthermore, each of these proteins is cleaved by one or more purified caspases, cysteine proteases involved in apoptotic death. The CAG length does not modulate susceptibility to cleavage of any of the full-length proteins. Our results suggest that by generation of truncated polyglutamine-containing proteins, caspase cleavage may represent a common step in the pathogenesis of each of these neurodegenerative diseases.


Subject(s)
Caspases , Nerve Tissue Proteins/metabolism , Neurodegenerative Diseases/genetics , Nuclear Proteins/metabolism , Peptides , Serine Endopeptidases/metabolism , Trinucleotide Repeats , Amino Acid Sequence , Apoptosis , Ataxin-3 , Caspase 1 , Caspase 3 , Caspase 7 , Caspase 8 , Caspase 9 , Cysteine Endopeptidases/metabolism , Humans , Huntingtin Protein , Jurkat Cells , Kinetics , Nerve Tissue Proteins/chemistry , Nerve Tissue Proteins/genetics , Nuclear Proteins/chemistry , Nuclear Proteins/genetics , Osteosarcoma , Receptors, Androgen/chemistry , Receptors, Androgen/metabolism , Repressor Proteins , Substrate Specificity , Tumor Cells, Cultured
6.
Cell Death Differ ; 5(4): 271-88, 1998 Apr.
Article in English | MEDLINE | ID: mdl-10200473

ABSTRACT

Apoptotic cell suicide initiated by ligation of CD95 (Fas/APO-1) occurs through recruitment, oligomerization and autocatalytic activation of the cysteine protease, caspase-8 (MACH, FLICE, Mch5). An endogenous mammalian regulator of this process, named Usurpin, has been identified (aliases for Usurpin include CASH, Casper, CLARP, FLAME-1, FLIP, I-FLICE and MRIT). This protein is ubiquitously expressed and exists as at least three isoforms arising by alternative mRNA splicing. The Usurpin gene is comprised of 13 exons and is clustered within approximately 200 Kb with the caspase-8 and -10 genes on human chromosome 2q33-34. The Usurpin polypeptide has features in common with pro-caspase-8 and -10, including tandem 'death effector domains' on the N-terminus of a large subunit/small subunit caspase-like domain, but it lacks key residues that are necessary for caspase proteolytic activity, including the His and Cys which form the catalytic substrates diad, and residues that stabilize the P1 aspartic acid in substrates. Retro-mutation of these residues to functional caspase counterparts failed to restore proteolytic activity, indicating that other determinants also ensure the absence of catalytic potential. Usurpin heterodimerized with pro-caspase-8 in vitro and precluded pro-caspase-8 recruitment by the FADD/MORT1 adapter protein. Cell death induced by CD95 (Fas/APO-1) ligation was attenuated in cells transfected with Usurpin. In vivo, a Usurpin deficit was found in cardiac infarcts where TUNEL-positive myocytes and active caspase-3 expression were prominent following ischemia/reperfusion injury. In contrast, abundant Usurpin expression (and a caspase-3 deficit) occurred in surrounding unaffected cardiac tissue, suggesting reciprocal regulation of these pro- and anti-apoptotic molecules in vivo. Usurpin thus appears to be an endogenous modulator of apoptosis sensitivity in mammalian cells, including the susceptibility of cardiac myocytes to apoptotic death following ischemia/ reperfusion injury.


Subject(s)
Apoptosis/physiology , Caspases/physiology , Intracellular Signaling Peptides and Proteins , fas Receptor/physiology , Alternative Splicing , Amino Acid Sequence , Animals , Apoptosis/genetics , Apoptosis/immunology , Base Sequence , CASP8 and FADD-Like Apoptosis Regulating Protein , Carrier Proteins/genetics , Carrier Proteins/physiology , Caspase 8 , Caspase 9 , Caspases/genetics , Chromosome Mapping , Chromosomes, Human, Pair 2/genetics , Cloning, Molecular , DNA Primers/genetics , Enzyme Activation , Female , HeLa Cells , Humans , Jurkat Cells , Male , Models, Biological , Molecular Sequence Data , Myocardial Reperfusion Injury/genetics , Myocardial Reperfusion Injury/pathology , Myocardial Reperfusion Injury/physiopathology , Pregnancy , RNA, Messenger/genetics , RNA, Messenger/metabolism , Rats , Sequence Homology, Amino Acid , Tissue Distribution
7.
J Biol Chem ; 272(29): 17907-11, 1997 Jul 18.
Article in English | MEDLINE | ID: mdl-9218414

ABSTRACT

There is compelling evidence that members of the caspase (interleukin-1beta converting enzyme/CED-3) family of cysteine proteases and the cytotoxic lymphocyte-derived serine protease granzyme B play essential roles in mammalian apoptosis. Here we use a novel method employing a positional scanning substrate combinatorial library to rigorously define their individual specificities. The results divide these proteases into three distinct groups and suggest that several have redundant functions. The specificity of caspases 2, 3, and 7 and Caenorhabditis elegans CED-3 (DEXD) suggests that all of these enzymes function to incapacitate essential homeostatic pathways during the effector phase of apoptosis. In contrast, the optimal sequence for caspases 6, 8, and 9 and granzyme B ((I/L/V)EXD) resembles activation sites in effector caspase proenzymes, consistent with a role for these enzymes as upstream components in a proteolytic cascade that amplifies the death signal.


Subject(s)
Apoptosis/physiology , Caspases , Cysteine Endopeptidases/metabolism , Serine Endopeptidases/metabolism , Amino Acid Sequence , Animals , Caenorhabditis elegans/enzymology , Caenorhabditis elegans Proteins , Granzymes , Humans , Mammals , Recombinant Proteins/metabolism , Substrate Specificity
9.
Nat Genet ; 13(4): 442-9, 1996 Aug.
Article in English | MEDLINE | ID: mdl-8696339

ABSTRACT

Apoptosis has recently been recognized as a mode of cell death in Huntington disease (HD). Apopain, a human counterpart of the nematode cysteine protease death-gene product, CED-3, has a key role in proteolytic events leading to apoptosis. Here we show that apoptotic extracts and apopain itself specifically cleave the HD gene product, huntingtin. The rate of cleavage increases with the length of the huntingtin polyglutamine tract, providing an explanation for the gain-of-function associated with CAG expansion. Our results show that huntingtin is cleaved by cysteine proteases and suggest that HD might be a disorder of inappropriate apoptosis.


Subject(s)
Apoptosis , Caspases , Cysteine Endopeptidases/metabolism , Nerve Tissue Proteins/metabolism , Nuclear Proteins/metabolism , Animals , Caspase 3 , Cell Line , Chlorocebus aethiops , Humans , Huntingtin Protein , Huntington Disease/physiopathology , Kinetics , Peptides/chemistry , Recombinant Proteins , Structure-Activity Relationship , Substrate Specificity , Transfection , Trinucleotide Repeats
10.
Nat Struct Biol ; 3(7): 619-25, 1996 Jul.
Article in English | MEDLINE | ID: mdl-8673606

ABSTRACT

Cysteine proteases related to mammalian interleukin-1 beta converting enzyme (ICE) and to its Caenorhabditis elegans homologue, CED-3, play a critical role in the biochemical events that culminate in apoptosis. We have determined the three-dimensional structure of a complex of the human CED-3 homologue CPP32/apopain with a potent tetrapeptide-aldehyde inhibitor. The protein resembles ICE in overall structure, but its S4 subsite is strikingly different in size and chemical composition. These differences account for the variation in specificity between the ICE- and CED-3-related proteases and enable the design of specific inhibitors that can probe the physiological functions of the proteins and disease states with which they are associated.


Subject(s)
Apoptosis/physiology , Caspases , Cysteine Endopeptidases/chemistry , Enzyme Precursors/chemistry , Amino Acid Sequence , Caspase 3 , Catalysis , Crystallography, X-Ray , Humans , Hydrogen Bonding , Isoenzymes/chemistry , Models, Structural , Molecular Sequence Data , Protein Conformation , Protein Structure, Tertiary , Substrate Specificity
11.
Biochemistry ; 33(44): 12981-9, 1994 Nov 08.
Article in English | MEDLINE | ID: mdl-7947702

ABSTRACT

The lipid requirement for the binding of wild-type Pseudomonas aeruginosa exotoxin A (ETA) to model endosomal membrane vesicles was evaluated using a fluorescence quenching technique. The binding of toxin to monodisperse model membrane vesicles (0.1 micron diameter) composed of various molar ratios of 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphatidylcholine (POPC) and 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphatidylserine (POPS) prepared by an extrusion method [Hope, M. J., et al. (1986) Chem. Phys. Lipids 40 89-107] was pH-dependent, with maximal binding observed at pH 4.0. Analysis of the binding curves indicated that the interaction of ETA with the membrane bilayer is dominated by a set of high-affinity binding sites (Kd = 2-8 microM; 60:40 (mol:mol) POPC/POPS large unilamellar vesicles (LUV)). The binding of toxin to membrane vesicles was highly pH-dependent, but was ionic strength-independent. Toxin-induced pore formation in the lipid bilayer, as measured by the release of the fluorescent dye, calcein, from LUV was pH-dependent, with optimal dye release occurring at pH 4.0. The rate of dye release from membrane vesicles decreased rapidly with increasing pH and approached zero at pH 6.0 and higher. The pKa for this process ranged over 4.3-4.5. Calcein release from LUV was also sensitive to changes in the ionic strength of the assay buffer, with maximal release occurring at 50 mM NaCl. Higher ionic strength medium resulted in a dramatic reduction in the rate of dye release from vesicles, indicating that the toxin-induced pore is modulated by ionic interactions.(ABSTRACT TRUNCATED AT 250 WORDS)


Subject(s)
ADP Ribose Transferases , Bacterial Toxins/metabolism , Exotoxins/metabolism , Phosphatidylserines/chemistry , Pseudomonas aeruginosa/metabolism , Virulence Factors , Animals , Bacterial Toxins/chemistry , Bacterial Toxins/pharmacology , Binding Sites/drug effects , Cell Membrane Permeability , Coated Vesicles/chemistry , Escherichia coli/cytology , Exotoxins/chemistry , Exotoxins/pharmacology , Fluoresceins/metabolism , Fluorescent Antibody Technique , Hydrogen-Ion Concentration , Indicators and Reagents/metabolism , Kinetics , Lipid Bilayers/metabolism , Mice , Models, Biological , Osmolar Concentration , Phosphatidylcholines/chemistry , Porosity/drug effects , Pseudomonas aeruginosa Exotoxin A
12.
Eur J Biochem ; 209(2): 725-34, 1992 Oct 15.
Article in English | MEDLINE | ID: mdl-1425677

ABSTRACT

Human leukotriene C4 (LTC4) synthase was purified > 10000-fold from dimethylsulfoxide-differentiated U937 cells. Steps included: (a) solubilization of membrane-bound LTC4 synthase from microsomal membranes by the anionic detergent taurocholate; (b) successive anion-exchange chromatography steps in the presence of taurocholate plus Triton X-100 (primary anion exchange) then taurocholate plus n-octyl glucoside (secondary anion exchange); and (c) LTC2-affinity chromatography on a matrix that was constructed by first biotinylating synthetic LTC2 then immobilizing the biotinylated LTC2 on streptavidin agarose. The purification of human LTC4 synthase was enabled by the finding that LTC4 synthase activity in preparations enriched > 500-fold was absolutely dependent on the presence in LTC4 synthase incubation mixtures of divalent cations (specifically Mg2+) and phospholipids (specifically phosphatidylcholine), and that reduced glutathione, which was required at 2-4 mM for stabilization of LTC4 synthase, irreversibly inactivated the enzyme when present at > or = 5 mM during freeze/thaw cycles. The > 10000-fold purified LTC4 synthase preparation was comprised of three polypeptides having molecular masses of 37.1, 24.5 and 18.0 kDa. An 18-kDa polypeptide in both microsomal membranes and in the LTC2-affinity purified fraction was specifically labelled by a radioiodinated LTC4 photoaffinity probe (azido 125I-LTC4). The Km values in the LTC2-affinity purified preparation for reduced glutathione and LTA4 were 1.83 mM and 19.6 microM (respectively), closely resembling the Km values in isolated human blood monocytes. The Vmax of LTC2-affinity purified LTC4 synthase was 2-4 mumol LTC4 formed .min-1 x mg-1.


Subject(s)
Dimethyl Sulfoxide/pharmacology , Glutathione Transferase/isolation & purification , Glutathione Transferase/metabolism , Cell Differentiation/drug effects , Chromatography, Affinity , Chromatography, High Pressure Liquid , Chromatography, Ion Exchange , Humans , Kinetics , Macromolecular Substances , Molecular Weight , Tumor Cells, Cultured
13.
J Biol Chem ; 266(15): 9471-80, 1991 May 25.
Article in English | MEDLINE | ID: mdl-1851747

ABSTRACT

The individual pretreatment of Sprague-Dawley rats with either 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) or 2,2',4,4',5,5'-hexachlorobiphenyl (HCB) has been previously shown to result in the "induction" of [3H]TCDD specific binding activity in hepatic tissue. In the present work, the coadministration of TCDD and HCB increased the concentration of hepatic proteins capable of binding [3H]TCDD specifically by at least 2-3-fold. This increase was shown not to be the result of activation, by HCB, of a form of the receptor having low affinity toward [3H]TCDD into a form with high affinity. Kinetic analysis of the time course of binding of [3H]TCDD to induced cytosol was consistent with the presence of an "inducible" binding protein in addition to the "constitutive" aryl hydrocarbon (Ah) receptor present in cytosol from untreated animals. The liganded ([3H]TCDD) form of the inducible binding component lost its ligand much faster than the liganded form of the constitutive Ah receptor at 37 degrees C; apparent first order rate constants for loss of [3H]TCDD were 0.55 min-1 and less than 0.0024 min-1, respectively. Conversely, the unliganded form of the induced binding component was slightly more stable (approximately 2-fold) toward thermal inactivation than the unbound constitutive Ah receptor. The [3H]TCDD-bound protein(s) in uninduced and induced cytosols behaved identically in a sucrose gradient; 8.7-8.9 S in the absence of salt, shifted to 5.5 S by 0.4 M KCl. They were also indistinguishable by gel permeation chromatography, and by photoaffinity labeling their TCDD-binding subunits, approximate molecular weights 105,000. These results show the hepatic TCDD-binding protein(s) induced upon pretreatment of Sprague-Dawley rats with TCDD/HCB to be kinetically distinct from the Ah receptor, but structurally very similar.


Subject(s)
Hydrocarbons/metabolism , Liver/chemistry , Receptors, Drug/chemistry , Affinity Labels , Animals , Body Weight , Chromatography, Gel , Electrophoresis, Polyacrylamide Gel , Kinetics , Male , Organ Size , Polychlorinated Dibenzodioxins/metabolism , Rats , Rats, Inbred Strains , Receptors, Aryl Hydrocarbon , Temperature , Thymus Gland/drug effects
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