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Methods Mol Biol ; 543: 389-402, 2009.
Article in English | MEDLINE | ID: mdl-19378178

ABSTRACT

The synthesis of 8-azido-2'-deoxyadenosine-5'-triphosphate is described. The photoreactive dATP analog was characterized by thin layer chromatography and UV spectroscopy. Its photoreactivity upon UV irradiation was studied. After incorporation of this dATP analog by nick translation into DNA containing the tet operator sequence the investigation of the interactions between tet operator DNA and Tet repressor becomes possible. Photocrosslinking of protein to DNA was demonstrated by the reduced migration of the DNA protein crosslinks in SDS polyacrylamide gel electrophoresis.


Subject(s)
Adenine/analogs & derivatives , Azides/chemistry , Azides/radiation effects , Cross-Linking Reagents/chemistry , Cross-Linking Reagents/radiation effects , DNA/metabolism , Proteins/metabolism , Ultraviolet Rays , Adenine/chemistry , Adenine/radiation effects , Adenine Nucleotides/chemistry , Chromatography, Ion Exchange , DNA/chemistry , DNA Adducts/metabolism , Deoxyadenine Nucleotides/chemical synthesis , Deoxyadenine Nucleotides/chemistry , Imines/chemistry , Molecular Biology , Molecular Conformation , Photoaffinity Labels , Plasmids/metabolism , Proteins/chemistry , Spectrum Analysis
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