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1.
Mol Phylogenet Evol ; 62(2): 653-63, 2012 Feb.
Article in English | MEDLINE | ID: mdl-22122942

ABSTRACT

We examined how peripherally isolated endemic species may have contributed to the biodiversity of the Indo-Australian Archipelago biodiversity hotspot by reconstructing the evolutionary history of the wrasse genus Anampses. We identified three alternate models of diversification: the vicariance-based 'successive division' model, and the dispersal-based 'successive colonisation' and 'peripheral budding' models. The genus was well suited for this study given its relatively high proportion (42%) of endemic species, its reasonably low diversity (12 species), which permitted complete taxon sampling, and its widespread tropical Indo-Pacific distribution. Monophyly of the genus was strongly supported by three phylogenetic analyses: maximum parsimony, maximum likelihood, and Bayesian inference based on mitochondrial CO1 and 12S rRNA and nuclear S7 sequences. Estimates of species divergence times from fossil-calibrated Bayesian inference suggest that Anampses arose in the mid-Eocene and subsequently diversified throughout the Miocene. Evolutionary relationships within the genus, combined with limited spatial and temporal concordance among endemics, offer support for all three alternate models of diversification. Our findings emphasise the importance of peripherally isolated locations in creating and maintaining endemic species and their contribution to the biodiversity of the Indo-Australian Archipelago.


Subject(s)
DNA, Mitochondrial/genetics , Electron Transport Complex IV/genetics , Genetic Speciation , Perciformes/genetics , Phylogeny , RNA, Ribosomal/genetics , Animals , Australia , Base Sequence , Bayes Theorem , Biodiversity , Biological Evolution , Coral Reefs , India , Likelihood Functions , Perciformes/classification , Phylogeography , Sequence Analysis, DNA , Species Specificity
2.
Mol Phylogenet Evol ; 38(3): 808-19, 2006 Mar.
Article in English | MEDLINE | ID: mdl-16172007

ABSTRACT

Temporal origins of reef fishes in the Indo-Australian Archipelago were examined using wrasses in the genus Macropharyngodon. The genus was selected as it is morphologically and ecologically distinct, with strongly reef-associated species exhibiting discrete distributions across the Indo-Pacific. Phylogenetic relationships were explored using COI, 16S, and 12S rRNA mitochondrial sequences. Monophyly of the genus was supported by congruent Bayesian, maximum likelihood, and maximum parsimony trees. Estimates of lineage ages based on fossil-calibrated reef fish divergences suggest that Macropharyngodon had an extensive evolutionary history starting in the early Miocene. Repeated divergences of Indian Ocean-Pacific Ocean lineages appear to have occurred over at least 19 million years. Regional endemics represent both old and young clades. Our estimates of early Miocene origins, and mid-Miocene to Pliocene diversifications of Macropharyngodon are supported by recent studies of other reef fish genera, and emphasise the importance of pre-Pleistocene events in generating Indo-Pacific coral reef fish biodiversity.


Subject(s)
Fishes/classification , Animals , DNA/genetics , DNA, Mitochondrial/genetics , Electron Transport Complex IV/genetics , Phylogeny , Polymerase Chain Reaction , RNA, Ribosomal/genetics , RNA, Ribosomal, 16S/genetics , Species Specificity
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