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1.
Org Lett ; 26(13): 2558-2563, 2024 Apr 05.
Article in English | MEDLINE | ID: mdl-38530919

ABSTRACT

Photoinduced cascade of two 6π-electron six- and five-center electrocyclizations in aromatic azido imines is oxidatively controlled to yield complex fused benzimidazoles or indazoles. Formation of benzimidazoles occurs via an unprecedented carbon-to-nitrogen o-iminoaryl 1,2-shift.

2.
Org Lett ; 25(7): 1131-1135, 2023 Feb 24.
Article in English | MEDLINE | ID: mdl-36763986

ABSTRACT

A new mode for complexity-building photochemical cascades which offers experimentally simple transition metal-free intramolecular Csp2-Csp3 cross coupling of aromatic amides is attained via an unprecedented [2 + 2] reactivity of ESIPT-generated azaxylylenes. Coupled with short and straightforward postphotochemical modifications of the primary photoproducts, these cascades allow for a significant step-normalized growth of molecular complexity while accessing diverse and complex polyheterocyclic molecular architectures.

3.
Angew Chem Int Ed Engl ; 61(4): e202112573, 2022 Jan 21.
Article in English | MEDLINE | ID: mdl-34850525

ABSTRACT

A new complexity building photoinduced cascade which amounts to an unprecedented formal [4+2+2+2] cycloaddition topology is developed to access complex nitrogen polyheterocycles. This photocascade is initiated by the excited state intramolecular proton transfer (ESIPT) in aromatic amino ketones with tethered dual unsaturated pendants, i.e. pyrrole and alkenic moieties, resulting in the formation of four σ-bonds and setting six new stereogenic centers in a single experimentally simple photochemical step with up to 220 mcbit complexity increases.

4.
J Org Chem ; 85(9): 6201-6205, 2020 May 01.
Article in English | MEDLINE | ID: mdl-32323536

ABSTRACT

Briarellins, a subset of C2-C11 cyclized cembranoids, were proposed to contain a C3-C14 ether or lactone bridge, similar to asbestinins. However, the total synthesis of the proposed structure of briarellin J revealed a misassignment. We revisited briarellins, computationally, with the help of a recently developed hybrid DFT/parametric method, DU8+, and revised the structures of briarellin C14-C3 ε-lactones to new structural types containing either a C14-C11 or C14-C12 lactone bridge. The original structures of briarellin and asbestinin ethers were confirmed.


Subject(s)
Lactones
5.
J Org Chem ; 84(12): 7575-7586, 2019 06 21.
Article in English | MEDLINE | ID: mdl-31145850

ABSTRACT

Analysis of published NMR data for natural products containing the oxetane moiety, with the help of a recently developed parametric/DFT hybrid computational method DU8+, has revealed that oxetanes and related compounds constitute yet another significant challenge in structure elucidation and stereochemistry assignment, as more than 30 structures required revision. The most common pitfalls are discussed, and revised structures are suggested for 26 natural products.


Subject(s)
Biological Products/chemistry , Density Functional Theory , Ethers, Cyclic/chemistry , Models, Molecular , Molecular Conformation
6.
Org Lett ; 21(8): 2855-2858, 2019 04 19.
Article in English | MEDLINE | ID: mdl-30933523

ABSTRACT

Furylimines of aromatic o-nitro aldehydes undergo a photoinduced cascade transformation offering rapid atom- and step-economical access to complex polyheterocyclic scaffolds possessing a privileged pyrroloquinazolinone core.


Subject(s)
Alkaloids/chemistry , Pyrroles/chemistry , Quinazolinones/chemistry , Aldehydes/chemistry , Catalysis , Cyclization , Imines/chemistry , Oxidation-Reduction , Photochemical Processes , Polymers/chemistry , Stereoisomerism
7.
Nat Prod Rep ; 36(1): 35-107, 2019 01 01.
Article in English | MEDLINE | ID: mdl-30003207

ABSTRACT

Covering: up to 2018With contributions from the global natural product (NP) research community, and continuing the Raw Data Initiative, this review collects a comprehensive demonstration of the immense scientific value of disseminating raw nuclear magnetic resonance (NMR) data, independently of, and in parallel with, classical publishing outlets. A comprehensive compilation of historic to present-day cases as well as contemporary and future applications show that addressing the urgent need for a repository of publicly accessible raw NMR data has the potential to transform natural products (NPs) and associated fields of chemical and biomedical research. The call for advancing open sharing mechanisms for raw data is intended to enhance the transparency of experimental protocols, augment the reproducibility of reported outcomes, including biological studies, become a regular component of responsible research, and thereby enrich the integrity of NP research and related fields.


Subject(s)
Biological Products/chemistry , Magnetic Resonance Spectroscopy/methods , Molecular Conformation , Reproducibility of Results
9.
J Org Chem ; 82(7): 3368-3381, 2017 04 07.
Article in English | MEDLINE | ID: mdl-28339201

ABSTRACT

Halogenated natural products constitute diverse and promising feedstock for molecular pharmaceuticals. However, their solution-structure elucidation by NMR presents several challenges, including the lack of fast methods to compute 13C chemical shifts for carbons bearing heavy atoms. We show that parametric corrections to DFT-computed chemical shifts in conjunction with rff-computed spin-spin coupling constants allow for fast and reliable screening of a large number of reported halogenated natural products, resulting in expedient structure validation or revision. In this paper, we examine more than 100 structures of halogenated terpenoids and other natural products with the new parametric approach and demonstrate that the accuracy of the combined method is sufficient to identify misassignments and suggest revisions in most cases (16 structures are revised). As the 1D 1H and 13C NMR data are ubiquitous and most routinely used in solution structure elucidation, this fast and efficient two-criterion method (nuclear spin-spin coupling and 13C chemical shifts) which we term DU8+ is recommended as the first essential step in structure assignment and validation.


Subject(s)
Biological Products/chemistry , High-Throughput Screening Assays , Quantum Theory , Carbon-13 Magnetic Resonance Spectroscopy , Halogenation , Molecular Structure
10.
Org Lett ; 18(19): 4860-4863, 2016 10 07.
Article in English | MEDLINE | ID: mdl-27611774

ABSTRACT

Structure revision of a recently reported spirodecane sesquiterpene, cordycepol A, from fungi Cordyceps ophioglossoides was enabled by fast and accurate calculations of nuclear spin-spin coupling constants (SSCCs) with a relativistic force field (DU8c) parametric method. Two other reported cordycepols, B and C, are also identified as misassigned. Calculations of accurate SSCCs, which contain a wealth of structural information, offer a chemically intuitive tool for structure elucidation, rendering the whole structure revision process more guided and intentional, while augmenting in a synergistic way the calculations of chemical shifts.

11.
Org Biomol Chem ; 12(47): 9683-95, 2014 Dec 21.
Article in English | MEDLINE | ID: mdl-25350150

ABSTRACT

The stereoselective total synthesis of zeaenol and 7-epi-zeaenol is achieved in a convergent manner using Julia-Kocienski olefination, protecting group-directed intermolecular diastereoselective Nozaki-Hiyama-Kishi (NHK) reaction, De Brabander's lactonization reaction and CBS reduction as the key steps. In this article, we have observed the most suitable protecting groups with respect to selectivity during the protecting group directed intermolecular asymmetric Nozaki-Hiyama-Kishi reaction. The zeaenol, 7-epi-zeaenol and its derivatives were analyzed for their biological activity and screened in four cancer cell lines.


Subject(s)
Antineoplastic Agents/chemical synthesis , Antineoplastic Agents/pharmacology , Zearalenone/analogs & derivatives , Antineoplastic Agents/chemistry , Ascomycota/chemistry , Cell Line, Tumor , Humans , Neoplasms/drug therapy , Stereoisomerism , Zearalenone/chemical synthesis , Zearalenone/chemistry , Zearalenone/pharmacology
12.
Bioorg Med Chem Lett ; 24(5): 1389-96, 2014 Mar 01.
Article in English | MEDLINE | ID: mdl-24508135

ABSTRACT

Rugulactone and its analogues were synthesized following Horners-Wadsworth-Emmons and ring-closing metathesis as the key reactions. A library of new rugulactone analogues were designed, synthesized and evaluated for their anticancer activity in breast cancer cells. All analogues have shown anti-proliferative activity, while some of them exhibited significant cytotoxicity. In assays related to cell-cycle distribution, these conjugates induced G1 cell-cycle arrest in MDA-MB-231 cells. The cell cycle arrest nature was further confirmed by examining the effect on Cyclin E and Cdk2 proteins that acts at G1-S phase transition. Immunocytochemistry assay revealed that these compounds inhibited nuclear translocation of NF-κB protein, thereby activation of NF-κB was inhibited. The expression of NF-κB target genes such as Cyclin D1 and Bcl-xL were severely affected. Apart from acting on NF-κB, these compounds also regulate class I Histone deacetylase proteins such as (HDAC-3 and 8) that have a crucial and regulatory role in cell-proliferation. Simultaneously, the apoptotic inducing nature of these compounds was confirmed by activation of PARP protein, a protein that plays a key role in DNA damage and repair pathways. Among all compounds of this series 3g is the most potent compound and can be used for further studies.


Subject(s)
Antineoplastic Agents/chemistry , Lactones/chemistry , NF-kappa B/antagonists & inhibitors , Antineoplastic Agents/chemical synthesis , Antineoplastic Agents/pharmacology , Cell Line, Tumor , Cell Survival/drug effects , Cyclin E/metabolism , Cyclin-Dependent Kinase 2/metabolism , Cyclin-Dependent Kinase Inhibitor p27/genetics , Cyclin-Dependent Kinase Inhibitor p27/metabolism , G1 Phase Cell Cycle Checkpoints/drug effects , Humans , Lactones/chemical synthesis , Lactones/pharmacology , MCF-7 Cells , NF-kappa B/metabolism , Oncogene Proteins/metabolism , Poly(ADP-ribose) Polymerases/metabolism , Structure-Activity Relationship , Transcription, Genetic/drug effects , bcl-X Protein/metabolism
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