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1.
J Radiat Res ; 54(6): 1015-28, 2013 Nov 01.
Article in English | MEDLINE | ID: mdl-23685670

ABSTRACT

In this study, a mechanism in which low-dose hyper-radiosensitivity (HRS) is permanently removed, induced by low-dose-rate (LDR) (0.2-0.3 Gy/h for 1 h) but not by high-dose-rate priming (0.3 Gy at 40 Gy/h) was investigated. One HRS-negative cell line (NHIK 3025) and two HRS-positive cell lines (T-47D, T98G) were used. The effects of different pretreatments on HRS were investigated using the colony assay. Cell-based ELISA was used to measure nitric oxide synthase (NOS) levels, and microarray analysis to compare gene expression in primed and unprimed cells. The data show how permanent removal of HRS, previously found to be induced by LDR priming irradiation, can also be induced by addition of nitric oxide (NO)-donor DEANO combined with either high-dose-rate priming or exposure to prolonged cycling hypoxia followed by reoxygenation, a treatment not involving radiation. The removal of HRS appears not to involve DNA damage induced during priming irradiation as it was also induced by LDR irradiation of cell-conditioned medium without cells present. The permanent removal of HRS in LDR-primed cells was reversed by treatment with inducible nitric oxide synthase (iNOS) inhibitor 1400W. Furthermore, 1400W could also induce HRS in an HRS-negative cell line. The data suggest that LDR irradiation for 1 h, but not 15 min, activates iNOS, and also that sustained iNOS activation is necessary for the permanent removal of HRS by LDR priming. The data indicate that nitric oxide production is involved in the regulatory processes determining cellular responses to low-dose-rate irradiation.


Subject(s)
Adaptation, Physiological/physiology , Adaptation, Physiological/radiation effects , Nitric Oxide Synthase Type II/metabolism , Nitric Oxide/metabolism , Radiation Tolerance/physiology , Radiation Tolerance/radiation effects , Cell Line, Tumor , Dose Fractionation, Radiation , Dose-Response Relationship, Radiation , Free Radicals/metabolism , Humans , Radiation Dosage
2.
J Proteomics ; 75(12): 3585-91, 2012 Jun 27.
Article in English | MEDLINE | ID: mdl-22521271

ABSTRACT

Variation of protein expression levels was investigated in the heart, lung and liver from an inbred (C57/BL6) and an outbred (CD-1) mouse line. Based on the measured inter-individual variation, optimal sample sizes for two-dimensional electrophoresis experiments were determined by means of power analysis. For both lines, the level of protein expression variation was in the range of technical variation. Thus, although the differences in protein expression variation were significant between organs and mouse lines, optimal sample sizes were very similar (between 8 for heart proteins from C57/BL6 and 10 for liver proteins of the same line). Proteins with organ expression bias (higher expression in one organ as compared to the other two organs) exhibited higher variation of expression and the proportion of these proteins in each organ explained at least partly inter-organ differences in protein expression variation. The results suggest that proteomic experiments using more heterogeneous mouse samples would not require much larger sample sizes than those using narrowly standardized samples. Experiment designs encompassing a broader genetic variation and thus affording increased relevance of the results can be accessible to proteomics researchers at still affordable sample sizes.


Subject(s)
Electrophoresis, Gel, Two-Dimensional/methods , Gene Expression Profiling/methods , Liver/metabolism , Myocardium/metabolism , Organ Specificity , Proteome/metabolism , Animals , Data Interpretation, Statistical , Mice , Mice, Inbred C57BL , Proteome/analysis , Reproducibility of Results , Sample Size , Sensitivity and Specificity , Species Specificity , Tissue Distribution
3.
J Mol Biol ; 367(5): 1330-46, 2007 Apr 13.
Article in English | MEDLINE | ID: mdl-17306301

ABSTRACT

Protein translocation across membranes is assisted by translocation machineries present in the membrane targeted by the precursor proteins. Translocon subunits can be functionally divided into receptor proteins warranting the specificity of this machine and a translocation channel. At the outer envelope of chloroplasts two sets of receptor proteins regulate protein translocation facing the cytosol or acting in the intermembrane space. One, Toc64 is a receptor of the translocon at the outer envelope of chloroplasts (Toc complex) with dual function. Toc64 recognizes Hsp90 delivered precursor proteins via a cytosolic exposed domain containing three tetratrico-peptide repeat motifs and as demonstrated in here, Toc64 functions also as a major component of a complex facing the intermembrane space. The latter complex is composed of an Hsp70 localized in the intermembrane space, its interaction partner Toc12, a J-domain containing protein and the intermembrane space protein Tic22. We analyzed the intermembrane space domain of Toc64. This domain is involved in preprotein recognition and association with the Toc-complex independent of the cytosolic domain of the Toc64 receptor. Therefore, Toc64 is involved in preprotein translocation across the outer envelope at both sites of the membrane.


Subject(s)
Arabidopsis Proteins/physiology , Membrane Proteins/physiology , Protein Precursors/metabolism , Amino Acid Sequence , Arabidopsis , Arabidopsis Proteins/chemistry , Arabidopsis Proteins/metabolism , Cell Membrane/metabolism , Chloroplasts/metabolism , Membrane Proteins/chemistry , Membrane Proteins/metabolism , Membrane Transport Proteins/physiology , Models, Biological , Molecular Sequence Data , Peptide Hydrolases/metabolism , Plant Proteins/physiology , Protein Transport/physiology , Receptors, Cell Surface/physiology , Sequence Homology, Amino Acid
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