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1.
J Hosp Infect ; 104(4): 503-507, 2020 Apr.
Article in English | MEDLINE | ID: mdl-31874205

ABSTRACT

The duration of eXDR carriage depends on several factors that might be difficult to recover. We aim to assess the duration of eXDR carriage by using a simple to recover parameter: the number of consecutive negative screening. 131 eXDR carriers (51 VRE and 80 CPE) were included. The number of consecutive negative screenings was strongly associated with eXDR clearance. All patients displaying at least three negative screenings over a seven-month period were never screened positive thereafter. Taking into account the number of negative screenings as a part of a case-by-case risk assessment would be helpful for the decision to maintain or lift eXDR-focused precautions.


Subject(s)
Carbapenem-Resistant Enterobacteriaceae/isolation & purification , Carrier State/microbiology , Enterobacteriaceae Infections/microbiology , Vancomycin-Resistant Enterococci/isolation & purification , Feces/microbiology , Humans , Laboratories, Hospital , Paris
2.
Int J Infect Dis ; 34: 122-5, 2015 May.
Article in English | MEDLINE | ID: mdl-25835101

ABSTRACT

We report herein a case of bacteremic ascitic fluid infection in a liver transplant patient caused by a strain of Yersinia pseudotuberculosis serogroup I that lost the yersiniabactin core. The patient's outcome was favorable after a combined therapy with a third-generation cephalosporin and gentamicin.


Subject(s)
Ascitic Fluid/microbiology , Bacteremia/diagnosis , Liver Transplantation , Yersinia pseudotuberculosis Infections/diagnosis , Yersinia pseudotuberculosis/isolation & purification , Anti-Bacterial Agents/therapeutic use , Bacteremia/drug therapy , Bacteremia/etiology , Cephalosporins/therapeutic use , Drug Therapy, Combination , Gentamicins/therapeutic use , Humans , Male , Middle Aged , Treatment Outcome , Yersinia pseudotuberculosis Infections/drug therapy
3.
Genome Announc ; 2(4)2014 Jul 10.
Article in English | MEDLINE | ID: mdl-25013134

ABSTRACT

The attenuated BCG strain of Mycobacterium bovis is widely used as a vaccine against tuberculosis. However, in rare cases, it can be pathogenic to humans. Here, we report the first draft of a whole-genome sequence of a multidrug-resistant clinical isolate of M. bovis BCG.

4.
Euro Surveill ; 18(33): 20555, 2013 Aug 15.
Article in English | MEDLINE | ID: mdl-23968874

ABSTRACT

A marked increase in the number of multidrug-resistant (MDR) tuberculosis (TB) cases entirely related to patients born in the Former Soviet Union was observed in France in the last two years. Very few cases were clustered, suggesting it is a consequence of recent immigration of patients already infected in their country of origin. This major increase challenges the existing structures for management of MDR and extensively drug-resistant TB (XDR-TB).


Subject(s)
Extensively Drug-Resistant Tuberculosis/diagnosis , Extensively Drug-Resistant Tuberculosis/ethnology , Mycobacterium tuberculosis/isolation & purification , Patients/statistics & numerical data , Tuberculosis, Multidrug-Resistant/diagnosis , Tuberculosis, Multidrug-Resistant/ethnology , Adult , Antitubercular Agents/therapeutic use , Extensively Drug-Resistant Tuberculosis/drug therapy , Female , France/epidemiology , Genotype , Humans , Incidence , Male , Middle Aged , Mycobacterium tuberculosis/drug effects , Mycobacterium tuberculosis/genetics , Risk Factors , Tandem Repeat Sequences , Tuberculosis, Multidrug-Resistant/drug therapy , USSR/ethnology , Young Adult
5.
Med Mal Infect ; 43(8): 322-30, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23876208

ABSTRACT

PCR targeting the gene encoding 16S ribosomal RNA (commonly named broad-range PCR or 16S PCR) has been used for 20 years as a polyvalent tool to study prokaryotes. Broad-range PCR was first used as a taxonomic tool, then in clinical microbiology. We will describe the use of broad-range PCR in clinical microbiology. The first application was identification of bacterial strains obtained by culture but whose phenotypic or proteomic identification remained difficult or impossible. This changed bacterial taxonomy and allowed discovering many new species. The second application of broad-range PCR in clinical microbiology is the detection of bacterial DNA from clinical samples; we will review the clinical settings in which the technique proved useful (such as endocarditis) and those in which it did not (such as characterization of bacteria in ascites, in cirrhotic patients). This technique allowed identifying the etiological agents for several diseases, such as Whipple disease. This review is a synthesis of data concerning the applications, assets, and drawbacks of broad-range PCR in clinical microbiology.


Subject(s)
Bacteriology/trends , Polymerase Chain Reaction/methods , Ribotyping/methods , Bacteria/classification , Bacteria/genetics , Bacteria/isolation & purification , Bacterial Infections/diagnosis , Bacterial Infections/microbiology , DNA, Bacterial/genetics , DNA, Ribosomal/genetics , False Positive Reactions , Forecasting , Humans , Mass Spectrometry , Polymerase Chain Reaction/economics , Polymerase Chain Reaction/trends , RNA, Bacterial/genetics , RNA, Ribosomal, 16S/genetics , Ribotyping/economics , Ribotyping/trends , Sensitivity and Specificity , Species Specificity
6.
Int J Infect Dis ; 17(8): e629-33, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23402798

ABSTRACT

BACKGROUND: Hemophagocytosis during Q fever (QF) and Mediterranean spotted fever (MSF) is rare and only a few cases have been reported. We aimed to investigate the characteristics, outcome, and treatment of QF/MSF-associated hemophagocytosis. METHODS: We retrospectively reviewed all patients with a diagnosis of QF or MSF and suspected hemophagocytic syndrome (HS), according to Henter's criteria, between 2002 and 2011, and compared the latter to patients without HS or with lymphoma-associated HS. RESULTS: Seventeen patients with HS (median age 42 years, range 5-68 years; five females (29%)) with QF (n=8) and MSF (n=9) were included in this study. When comparing patients with QF- and MSF-associated HS with patients without HS (n=11), HS-associated signs (splenomegaly, ferritinemia, hypertriglyceridemia, and cytopenia) were significantly more frequent in patients with histological HS (p<0.05), along with a greater number of Henter's criteria. Despite the presence of HS-associated signs, treatment was similar in these two subgroups, including the time to recovery and the outcome. When compared to lymphoma-associated HS (n=10), the outcome in QF/MSF-associated HS was significantly different, with mortality in 70% of lymphoma patients versus none in QF- and MSF-associated HS (p<0.05). CONCLUSION: Hemophagocytosis is a rare occurrence during the course of QF and MSF. The presence of profound cytopenia is quite unusual in QF and MSF and should bring to mind the presence of associated HS. Nevertheless, hemophagocytic syndrome is associated with a good outcome in this condition.


Subject(s)
Boutonneuse Fever/complications , Lymphohistiocytosis, Hemophagocytic/complications , Q Fever/complications , Adolescent , Adult , Aged , Aged, 80 and over , Biopsy , Boutonneuse Fever/diagnosis , Child , Child, Preschool , Female , Humans , Liver/pathology , Lymphohistiocytosis, Hemophagocytic/diagnosis , Lymphohistiocytosis, Hemophagocytic/therapy , Lymphoma/complications , Male , Middle Aged , Q Fever/diagnosis , Retrospective Studies , Young Adult
7.
Eur J Clin Microbiol Infect Dis ; 31(8): 1951-60, 2012 Aug.
Article in English | MEDLINE | ID: mdl-22231499

ABSTRACT

To reduce the delay in diagnosis of Q fever, we have adapted the ultrasensitive immuno-PCR method for the detection of Phase II IgM anti-Coxiella burnetii. We compared its performance to ELISA, IFA and PCR using 31 acute Q fever sera and 50 control sera. The best sensitivity was obtained by iPCR (27 out of 31) followed by PCR (18 out of 31), ELISA (12 out of 31) and IFA (10 out of 31). A specificity of 92% was found by iPCR (3 false positive out of 40), 92% for ELISA (3 false positive out of 40) whereas PCR and IFA exhibited a specificity of 100%. Among the 31 Q fever sera, we compared the four methods for the detection of the early sera sampled during the two first weeks after the onset of symptoms and found a sensitivity of 90% by iPCR, 55% for PCR, 35% for ELISA and 25% for IFA. The results presented in this study suggest that iPCR is a promising, sensitive and specific method that can be used for the early diagnosis of acute Q fever and more generally for acute infections where traditional methods lack sensitivity.


Subject(s)
Clinical Laboratory Techniques/methods , Polymerase Chain Reaction/methods , Q Fever/diagnosis , Antibodies, Bacterial/blood , Humans , Immunoassay/methods , Immunoglobulin M/blood , Sensitivity and Specificity , Serologic Tests/methods
8.
Med Mal Infect ; 39(2): 71-81, 2009 Feb.
Article in French | MEDLINE | ID: mdl-19118963

ABSTRACT

Rickettsiae are strictly intracellular bacteria belonging to the Rickettsiaceae family. They are transmitted by various arthropods species, which are either vectors or reservoirs for the bacteria. The specific association between Rickettsieae and the vector are extensively studied, moreover Rickettsieae associated diseases are part of a continuously evolving field. Nevertheless, some rickettsiosis, such as epidemic typhus, have been described since the 16th century. Emerging diseases related to these bacteria are being investigated as well as new species, the implication of which is not always clear in human pathology when they are discovered. Some of these diseases are benign, others may be potentially fatal. Clinicians must therefore be aware of them. These issues are reviewed.


Subject(s)
Rickettsiaceae Infections/classification , Animals , Boutonneuse Fever/epidemiology , Cats , Helicobacter Infections/classification , Helicobacter Infections/therapy , Humans , Rats , Rickettsia , Rickettsia Infections/classification , Rickettsia Infections/therapy , Rickettsiaceae , Rickettsiaceae Infections/therapy
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