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1.
Int J Mol Sci ; 23(18)2022 Sep 07.
Article in English | MEDLINE | ID: mdl-36142182

ABSTRACT

The cytosolic immune receptor NLRP3 (nucleotide-binding domain, leucine-rich repeat (LRR), and pyrin domain (PYD)-containing protein 3) oligomerizes into the core of a supramolecular complex termed inflammasome in response to microbes and danger signals. It is thought that NLRP3 has to bind NEK7 (NIMA (never in mitosis gene a)-related kinase 7) to form a functional inflammasome core that induces the polymerization of the adaptor protein ASC (Apoptosis-associated speck-like protein containing a CARD (caspase recruitment domain)), which is a hallmark for NLRP3 activity. We reconstituted the NLRP3 inflammasome activity in modified HEK293 (human embryonic kidney 293) cells and showed that the ASC speck polymerization is independent of NEK7 in the context of this cell system. Probing the interfaces observed in the different, existing structural models of NLRP3 oligomers, we present evidence that the NEK7-independent, constitutively active NLRP3 inflammasome core in HEK293 cells may resemble a stacked-torus-like hexamer seen for NLRP3 lacking its PYD (pyrin domain).


Subject(s)
CARD Signaling Adaptor Proteins/metabolism , Inflammasomes , NLR Family, Pyrin Domain-Containing 3 Protein/metabolism , Adaptor Proteins, Signal Transducing/metabolism , CARD Signaling Adaptor Proteins/genetics , HEK293 Cells , Humans , Inflammasomes/metabolism , Leucine , NIMA-Related Kinases/genetics , Nucleotides/metabolism
2.
Structure ; 19(8): 1074-83, 2011 Aug 10.
Article in English | MEDLINE | ID: mdl-21827944

ABSTRACT

The apoptotic protease-activating factor 1 (Apaf-1) relays the death signal in the mitochondrial pathway of apoptosis. Apaf-1 oligomerizes on binding of mitochondrially released cytochrome c into the heptameric apoptosome complex to ignite the downstream cascade of caspases. Here, we present the 3.0 Å crystal structure of full-length murine Apaf-1 in the absence of cytochrome c. The structure shows how the mammalian death switch is kept in its "off" position. By comparing the off state with a recent cryo-electron microscopy derived model of Apaf-1 in its apoptosomal conformation, we depict the molecular events that transform Apaf-1 from autoinhibited monomer to a building block of the caspase-activating apoptosome. Moreover, we have solved the crystal structure of the R265S mutant of full-length murine Apaf-1 in the absence of cytochrome c to 3.55 Å resolution and we show that proper function of Apaf-1 relies on R265 in the vicinity of the bound nucleotide.


Subject(s)
Apoptosis , Apoptotic Protease-Activating Factor 1/chemistry , Mitochondria/physiology , Signal Transduction , Animals , Apoptotic Protease-Activating Factor 1/genetics , Caspase 9/chemistry , Crystallography, X-Ray , Enzyme Activation , Enzyme Assays , Mice , Mutation, Missense , Protein Multimerization , Protein Structure, Secondary , Protein Structure, Tertiary
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