Effect of metabolic rate on time-lag changes in otolith microchemistry: an experimental approach using Salmo trutta.

Ecologists have long been interested in relevant techniques to track the field movement patterns of fish. The elemental composition of otoliths represents a permanent record of the growing habitats experienced by a fish throughout its lifetime and is increasingly used in the literature. The lack of a predictive and mechanistic understanding of the individual kinematics underlying ion incorporation/depletion limits our fine-scale temporal interpretation of the chemical signal recorded in the otolith. In particular, the rate at which elements are incorporated into otoliths is hypothesized to depend on fish physiology. However, to date, time lags have mostly been quantified on a population scale. Here, we report results from controlled experiments (translocation and artificially enriched environment) on individual trace element incorporation/depletion rates in Salmo trutta (Salmonidae). We reported significant lags (i.e. weeks to months) between changes in water chemistry and the subsequent change in otolith composition and highlighted substantial inter-individual variations in the timing and magnitude of Sr/Ca and Ba/Ca responses. These differences are partially linked to the energetic status (i.e. metabolic rate) of the individuals. It therefore appears that individuals with the highest metabolic rate are more likely to record detailed (i.e. brief) temporal changes than individuals having lower metabolic values. The time taken for environmental changes to be reflected in the growing otolith thus can no longer be assumed to remain a constant within populations. Results from the current study are a step towards the fine reconstruction of environmental histories in dynamic environments.

Sea lamprey nests promote the diversity of benthic macroinvertebrate assemblages.

The habitat heterogeneity hypothesis states that increased habitat heterogeneity promotes species diversity through increased availability of ecological niches. We aimed at describing the local-scale (i.e. nest and adjacent substrate) effects of nests of the sea lamprey (Petromyzon marinus L.) as ecosystem engineer on macroinvertebrate assemblages. We hypothesized that increased streambed physical heterogeneity caused by sea lamprey spawning would modify invertebrate assemblages and specific biologic traits and promote reach-scale diversity. We sampled thirty lamprey nests of the Nive River, a river of the south western France with a length of 79.3 km and tributary of the Adour River, in three zones: the unmodified riverbed (upstream) and zones corresponding to the nest: the area excavated (pit) and the downstream accumulation of pebbles and cobbles (mound). The increased habitat heterogeneity created by lamprey was accompanied by biological heterogeneity with a reduced density of invertebrates (3777 ± 1332 individuals per m2 in upstream, 2649 ± 1386 individuals per m2 in pit and 3833 ± 1052 individuals per m2 in mound) and number of taxa (23.5 ± 3.9 taxa for upstream, 18.6 ± 3.9 taxa in pit and 21.2 ± 4.5 taxa for mound) in the pit compared to other zones. However the overall taxa diversity in nest increased with 82 ± 14 taxa compared to the 69 ± 8 taxa estimated in upstream zone. Diversity indices were consistent with the previous results indicating a loss of α diversity in pit but a higher ß diversity between a pit and a mound than between two upstream zones, especially considering Morisita index accounting for taxa abundance. Trait analysis showed high functional diversity within zones with a reduced proportion of collectors, scrapers, shredders, litter/mud preference and small invertebrates in mound, while the proportion of "slabs, blocks, stones and pebbles" preference and largest invertebrates increased. Pit presented the opposite trend, while upstream had globally intermediate trait proportions. Our results highlight important effects on species and functional diversity due to habitat heterogeneity created by a nest-building species, what can ultimately influence food webs and nutrient processes in river ecosystems.

Realistic variations in substrate composition affect spawning preference and egg retention in river lamprey (Lampetra fluviatilis).

Egg drift from the nest is clearly an important cause of mortality in lithophilic species, but the effect of substrate composition on this process has been overlooked. Here, we investigated the role of substrate on the spawning preference and egg retention of river lamprey (Lampetra fluviatilis) during a whole breeding season in a two-option experimental setting. Despite no initial preference, the lamprey eventually favoured the most efficient substrate for egg retention. The pebbly substrate hosted 12 times as many matings as the sandy one, while blurting 20% fewer eggs.

A complete check-up of European eel after eight years of restocking in an upland river: Trends in growth, lipid content, sex ratio and health status.

By combining field research and careful laboratory analysis of samples over the course of an eight-year study, we met the challenge of assessing the life history traits and health status of eels restocked in freshwater ecosystems. We found that restocked eels exhibited good growth performance; moreover, the stocks were female-dominated, showed a good Fulton's condition factor (K) and lipid stores and had high survival probability estimated using the best model of Jolly-Seber stock assessment method for open populations. A necropsy revealed the absence of internal lesions. A swim bladder examination revealed the absence of the parasite Anguillicola crassus. Polymerase chain reaction (PCR) analyses revealed an increase of Anguillid herpesvirus-1 (AngHV-1) prevalence throughout the study. Most positive subjects expressed viral loads compatible with a latent infection and correlated positively with K. All restocked eels were contaminated by at least one of the organic pollutant congeners studied, but the pollution loads corresponded to the lowest range of pollutant concentrations reported in the available literature for European eels and did not exceed the maximum residue and contaminant limits in food and feed of several national and international regulations. Pollutant loads were negatively correlated with K, lipid content and eel density for polychlorinated biphenyls PCB 138, 153 and 180 and K for pesticides p.p'-DDE, p.p'-DDD, p.p'-DDT and PBDE47. This study highlights the potential role played by upland aquatic ecosystems in enhancing riverine silver eel production from the perspective of species conservation. To be successful, restocking must be accompanied by improved ecosystem quality and migration routes for eels in inland freshwaters. We also provide some recommendations for future research to improve the management of restocking programmes.

Individual and group characteristics affecting nest building in sea lamprey (Petromyzon marinus L. 1758).

Nest building relates to reproductive effort, sexual selection, intersexual conflict and cooperation and may be linked to individual phenotype and interindividual interactions. In particular, larger individuals having more energy reserves are expected to build more, larger nests, without having to trade intrasexual competition for cooperative nest building. Capture-mark-recapture and nest survey of sea lamprey (Petromyzon marinus L. 1758) were combined to assess the relationship between individuals and nesting activity on a spawning ground, throughout a breeding season, during which 202 nests were observed and 114 individuals were captured. On average, males and females stayed 8.33 ± 1.02 and 3.57 ± 1.04 days on the spawning ground, visited 2.26 ± 1.72 and 1.67 ± 1.17 nests and encountered 2.33 ± 2.13 mates for males and 2.29 ± 1.32 mates for females, respectively, and the number of mates encountered increased with the number of nests visited. Body size had no effect on the duration of presence on spawning ground, number of nests visited, number of individuals per nest and sex ratio on nest or nest volume. Bigger nests were found at the end of the season and were not necessarily built by more individuals. This work brings insights on the mating system and cooperative nest building in sea lamprey and may inform managers who want to estimate sea lamprey populations via nest surveys.

New insights into methylmercury induced behavioral and energy-related gene transcriptional responses in European glass eel (Anguilla anguilla).

The effect of methylmercury (MeHg) was investigated in glass eel migration behavior and metabolism. To migrate up estuary, glass eels synchronize their swimming activity to the flood tide and remain on or in the substratum during ebb tide. Following seven days of exposure to MeHg (100 ng L-1), glass eels migration behavior was expressed by their swimming synchronization to the water current reversal every 6.2 h (mimicking the alternation of flood and ebb tides) and their swimming activity level. In relation to their behavior, we then analyzed the energy-related gene expression levels in individual head, viscera and muscle. Results showed that MeHg decreased the number of glass eels synchronized to the change in water current direction and their swimming activity level. This last effect was more pronounced in non-synchronized fish than in synchronized ones, supporting the idea that non-synchronized glass eels could be more vulnerable to stress. As regard the expression of energy-related genes, no significant difference was observed between control and MeHg-exposed fish. In contrast, when the swimming activity levels were plotted against transcriptional responses, positive correlations were evidenced in viscera and especially in the head of exposed glass eels but not in control. Finally, it is noteworthy that non-synchronized glass eels displayed lower expression level of metabolism genes than their synchronized counterpart, but only in the head. Altogether, these results support the interest of focusing on the head to investigate the facultative migration behavior in glass eels and the effect of environmental stressors on this rhythmic behavior.

Sexual maturity increases mobility and heterogeneity in individual space use in Atlantic salmon (Salmo salar) parr.

We assessed the effects of sexual maturity on space use in Atlantic salmon (Salmo salar) parr as facultative early maturation enables us to work on individuals belonging to the same cohort. We monitored the space use of 40 1-year-old males in natura throughout a breeding season. First, mature individuals covered longer distances (absolute and upstream) and located within broader home ranges than immature parr. Second, sexual maturity also generated a higher interindividual variability in space use. Finally, mature individuals exhibited a higher probability of association with likely breeding sites on average. However, some mature individuals experienced a lower probability than immature individuals, suggesting that the space use of some mature individuals may not be optimal. Moreover, mature parr exploiting a broader home range or covering longer upstream distances had a higher probability of association with likely breeding sites. Covering longer upstream distances may therefore increase the reproductive success of mature parr, while involving higher energetic costs and a greater risk of predation.

Abundance indices and biological traits of juvenile salmon (Salmo salar) sampled in three rivers on the Atlantic and Channel coasts (France).

BACKGROUND: Atlantic Salmon (Salmo salar) is an anadromous migratory species adapted to cool temperatures. It is protected by the Bern convention and by the European Habitats Directive. It has been listed as vulnerable by the French IUCN Red List. Salmon decline is the result of combined and cumulated, mainly anthropic, causes: climate change, increasingly high number of impoundments, degradation of water quality and habitat and over-exploitation by fisheries. Monitoring of this species has been carried out on three rivers in France (Southern part of the distribution area) to produce data and knowledge (growth, precocious maturity, survival) for stock management.For 24 years, a specific and standardised electric fishing protocol has been used to target young-of-the-year (0+ parr) Atlantic salmon. Sampling was restricted to areas with shallow running water that flows over a coarse bottom substrate, i.e. the preferred habitat of young salmon. This monitoring and inventory of growing areas thus allows assessment of juvenile recruitment and provides baseline data required to calculate total allowable catches (TACs). NEW INFORMATION: The dataset currently consists of 47,077 occurrence data points from 105 sites spanning up to 24 years in three different watersheds in France. Beyond our project, this dataset has a clear utility to research since it associates abundance measurements with the measurement of biological traits and the collection of tissue samples. It allows for current and retrospective characterisation of individuals or populations, according to life history traits and genetic features in relation to changes in environmental conditions. The fact that the monitoring takes place in France, the southern part of the distribution area, over 24 years, makes the dataset particularly relevant for climate change studies.

Sexually dimorphic gene expressions in eels: useful markers for early sex assessment in a conservation context.

Environmental sex determination (ESD) has been detected in a range of vertebrate reptile and fish species. Eels are characterized by an ESD that occurs relatively late, since sex cannot be histologically determined before individuals reach 28 cm. Because several eel species are at risk of extinction, assessing sex at the earliest stage is a crucial management issue. Based on preliminary results of RNA sequencing, we targeted genes susceptible to be differentially expressed between ovaries and testis at different stages of development. Using qPCR, we detected testis-specific expressions of dmrt1, amh, gsdf and pre-miR202 and ovary-specific expressions were obtained for zar1, zp3 and foxn5. We showed that gene expressions in the gonad of intersexual eels were quite similar to those of males, supporting the idea that intersexual eels represent a transitional stage towards testicular differentiation. To assess whether these genes would be effective early molecular markers, we sampled juvenile eels in two locations with highly skewed sex ratios. The combined expression of six of these genes allowed the discrimination of groups according to their potential future sex and thus this appears to be a useful tool to estimate sex ratios of undifferentiated juvenile eels.

Sexual selection leads to a tenfold difference in reproductive success of alternative reproductive tactics in male Atlantic salmon.

The precocious maturation of some male Atlantic salmon (Salmo salar L.) has become a textbook example of alternative mating tactics, but the only estimates of reproductive success available so far are either the collective contribution of precocious males to reproduction in the wild or individual reproductive success in oversimplified experimental conditions. Using genetic parentage analysis on anadromous and precocious potential spawners and their offspring, we quantified components of individual reproductive success of both tactics in a natural population. On average, precocious males produced 2.24 (variance 67.62) offspring, against 27.17 (3080) for anadromous males. For both tactics, most of the variance in reproductive success was due to mating success, with 83% of precocious males having no mate, against 50% for anadromous males. Body size increased reproductive success of anadromous males and tended to decrease precocious males' reproductive success. Although these results do not solve the coexistence of alternative reproductive tactics (ARTs) in Atlantic salmon, their inclusion in comprehensive models of lifetime reproductive success should shed light on the evolution of precocious maturation in Atlantic salmon and its effect on the selection of phenotypic traits.